RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PPIL2Q13356 520 aa8.87□□□□□ -0.99
HDAC3-206ENST00000471968 COA7Q96BR5 231 aa8.87□□□□□ -0.99
HDAC3-206ENST00000471968 ATP11BQ9Y2G3 1177 aa8.87□□□□□ -0.99
HDAC3-206ENST00000471968 LRRC37A2A6NM11 1700 aa8.87□□□□□ -0.99
HDAC3-206ENST00000471968 AOX1Q06278 1338 aa8.86□□□□□ -0.99
HDAC3-206ENST00000471968 ZNF318Q5VUA4 2279 aa8.86□□□□□ -0.99
HDAC3-206ENST00000471968 MED19A0JLT2 244 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-206ENST00000471968 ALADP13716 330 aa8.86□□□□□ -0.99
HDAC3-206ENST00000471968 EPHB4P54760 987 aa8.86□□□□□ -0.99
HDAC3-206ENST00000471968 NEUROD1Q13562 356 aa8.86□□□□□ -0.99
HDAC3-206ENST00000471968 CCDC129Q6ZRS4 1044 aa8.86□□□□□ -0.99
HDAC3-206ENST00000471968 NLRP10Q86W26 655 aa8.86□□□□□ -0.99
HDAC3-206ENST00000471968 PRSS33Q8NF86 280 aa8.86□□□□□ -0.99
HDAC3-206ENST00000471968 SIN3AQ96ST3 1273 aa8.86□□□□□ -0.99
HDAC3-206ENST00000471968 TRANK1O15050 2925 aa8.85□□□□□ -0.99
HDAC3-206ENST00000471968 PRKAR2AP13861 404 aaKnown RBP8.85□□□□□ -0.99
HDAC3-206ENST00000471968 PTPN5P54829 565 aa8.85□□□□□ -0.99
HDAC3-206ENST00000471968 ACAP1Q15027 740 aa8.85□□□□□ -0.99
HDAC3-206ENST00000471968 SF3B3Q15393 1217 aaKnown RBP8.85□□□□□ -0.99
HDAC3-206ENST00000471968 TTLL5Q6EMB2 1281 aa8.85□□□□□ -0.99
HDAC3-206ENST00000471968 HERVK_113Q902F9 699 aa8.85□□□□□ -0.99
HDAC3-206ENST00000471968 ZKSCAN4Q969J2 545 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-206ENST00000471968 PRMT6Q96LA8 375 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-206ENST00000471968 PBX4Q9BYU1 374 aa8.85□□□□□ -0.99
HDAC3-206ENST00000471968 ACACBO00763 2458 aa8.85□□□□□ -0.99
HDAC3-206ENST00000471968 FASNP49327 2511 aaKnown RBP8.84□□□□□ -0.99
HDAC3-206ENST00000471968 SPDYE2BA6NHP3 402 aa8.84□□□□□ -0.99
HDAC3-206ENST00000471968 SPDYE6P0CI01 402 aa8.84□□□□□ -0.99
HDAC3-206ENST00000471968 CFAP100Q494V2 611 aa8.84□□□□□ -0.99
HDAC3-206ENST00000471968 GAS2L2Q8NHY3 880 aa8.84□□□□□ -0.99
HDAC3-206ENST00000471968 TRIB2Q92519 343 aa8.84□□□□□ -0.99
HDAC3-206ENST00000471968 WRNIP1Q96S55 665 aa8.84□□□□□ -0.99
HDAC3-206ENST00000471968 FAM86C1Q9NVL1 165 aa8.84□□□□□ -0.99
HDAC3-206ENST00000471968 XDHP47989 1333 aa8.83□□□□□ -1
HDAC3-206ENST00000471968 GRXCR1A8MXD5 290 aa8.83□□□□□ -1
HDAC3-206ENST00000471968 F8W031 263 aaPredicted RBP8.83□□□□□ -1
HDAC3-206ENST00000471968 ATP2B4P23634 1241 aa8.83□□□□□ -1
HDAC3-206ENST00000471968 MOGSQ13724 837 aa8.83□□□□□ -1
HDAC3-206ENST00000471968 CDCA8Q53HL2 280 aa8.83□□□□□ -1
HDAC3-206ENST00000471968 LHX8Q68G74 356 aa8.83□□□□□ -1
HDAC3-206ENST00000471968 HFE2Q6ZVN8 426 aa8.83□□□□□ -1
HDAC3-206ENST00000471968 SH3RF1Q7Z6J0 888 aa8.83□□□□□ -1
HDAC3-206ENST00000471968 GJD3Q8N144 294 aa8.83□□□□□ -1
HDAC3-206ENST00000471968 TEPSINQ96N21 525 aa8.83□□□□□ -1
HDAC3-206ENST00000471968 RALYQ9UKM9 306 aaKnown RBP8.83□□□□□ -1
HDAC3-206ENST00000471968 COG5Q9UP83 839 aa8.83□□□□□ -1
HDAC3-206ENST00000471968 RIF1Q5UIP0 2472 aaKnown RBP8.82□□□□□ -1
HDAC3-206ENST00000471968 TRIM43BA6NCK2 446 aa8.82□□□□□ -1
HDAC3-206ENST00000471968 SSTR3P32745 418 aaPredicted RBP8.82□□□□□ -1
HDAC3-206ENST00000471968 RBM5P52756 815 aaKnown RBP eCLIP8.82□□□□□ -1
HDAC3-206ENST00000471968 GTF2IP78347 998 aa8.82□□□□□ -1
HDAC3-206ENST00000471968 PPATQ06203 517 aa8.82□□□□□ -1
HDAC3-206ENST00000471968 TNFAIP1Q13829 316 aa8.82□□□□□ -1
HDAC3-206ENST00000471968 MAP3K21Q5TCX8 1036 aa8.82□□□□□ -1
HDAC3-206ENST00000471968 TRIM43Q96BQ3 446 aaPredicted RBP8.82□□□□□ -1
HDAC3-206ENST00000471968 MFSD14AQ96MC6 490 aa8.82□□□□□ -1
HDAC3-206ENST00000471968 TMEM39BQ9GZU3 492 aa8.82□□□□□ -1
HDAC3-206ENST00000471968 SEC31BQ9NQW1 1179 aa8.82□□□□□ -1
HDAC3-206ENST00000471968 PDLIM7Q9NR12 457 aa8.82□□□□□ -1
HDAC3-206ENST00000471968 TRIOO75962 3097 aa8.81□□□□□ -1
HDAC3-206ENST00000471968 CCND3P30281 292 aaPredicted RBP8.81□□□□□ -1
HDAC3-206ENST00000471968 IER5LQ5T953 404 aa8.81□□□□□ -1
HDAC3-206ENST00000471968 GPAT2Q6NUI2 795 aa8.81□□□□□ -1
HDAC3-206ENST00000471968 COA1Q9GZY4 146 aa8.81□□□□□ -1
HDAC3-206ENST00000471968 MED23Q9ULK4 1368 aa8.81□□□□□ -1
HDAC3-206ENST00000471968 SOWAHBA6NEL2 793 aa8.8□□□□□ -1
HDAC3-206ENST00000471968 TCP10L2B9ZVM9 353 aa8.8□□□□□ -1
HDAC3-206ENST00000471968 DCXO43602 365 aa8.8□□□□□ -1
HDAC3-206ENST00000471968 TRIM60Q495X7 471 aa8.8□□□□□ -1
HDAC3-206ENST00000471968 HSP90AB3PQ58FF7 597 aa8.8□□□□□ -1
HDAC3-206ENST00000471968 RTL5Q5HYW3 569 aaPredicted RBP8.8□□□□□ -1
HDAC3-206ENST00000471968 ANKRD13CQ8N6S4 541 aa8.8□□□□□ -1
HDAC3-206ENST00000471968 SMCR8Q8TEV9 937 aaPredicted RBP8.8□□□□□ -1
HDAC3-206ENST00000471968 HLA-CQ95604 372 aa8.8□□□□□ -1
HDAC3-206ENST00000471968 FAM89AQ96GI7 184 aa8.8□□□□□ -1
HDAC3-206ENST00000471968 THUMPD2Q9BTF0 503 aaKnown RBP8.8□□□□□ -1
HDAC3-206ENST00000471968 IGSF5Q9NSI5 407 aa8.8□□□□□ -1
HDAC3-206ENST00000471968 BSDC1Q9NW68 430 aaPredicted RBP8.8□□□□□ -1
HDAC3-206ENST00000471968 ZNF292O60281 2723 aa8.8□□□□□ -1
HDAC3-206ENST00000471968 ECM29Q5VYK3 1845 aa8.8□□□□□ -1
HDAC3-206ENST00000471968 GPR179Q6PRD1 2367 aa8.79□□□□□ -1
HDAC3-206ENST00000471968 FPGSQ05932 587 aa8.79□□□□□ -1
HDAC3-206ENST00000471968 CACNB2Q08289 660 aaPredicted RBP8.79□□□□□ -1
HDAC3-206ENST00000471968 TCF15Q12870 199 aa8.79□□□□□ -1
HDAC3-206ENST00000471968 MORC1Q86VD1 984 aa8.79□□□□□ -1
HDAC3-206ENST00000471968 CERS5Q8N5B7 392 aa8.79□□□□□ -1
HDAC3-206ENST00000471968 NKX2-4Q9H2Z4 354 aa8.79□□□□□ -1
HDAC3-206ENST00000471968 SLC28A3Q9HAS3 691 aa8.79□□□□□ -1
HDAC3-206ENST00000471968 ZNF70Q9UC06 446 aaPredicted RBP8.79□□□□□ -1
HDAC3-206ENST00000471968 GJD2Q9UKL4 321 aa8.79□□□□□ -1
HDAC3-206ENST00000471968 DOCK3Q8IZD9 2030 aa8.79□□□□□ -1
HDAC3-206ENST00000471968 CYP2B6P20813 491 aa8.78□□□□□ -1
HDAC3-206ENST00000471968 SPDYE2Q495Y8 402 aa8.78□□□□□ -1
HDAC3-206ENST00000471968 SLC39A5Q6ZMH5 540 aa8.78□□□□□ -1
HDAC3-206ENST00000471968 MCM10Q7L590 875 aa8.78□□□□□ -1
HDAC3-206ENST00000471968 TXNRD3Q86VQ6 643 aa8.78□□□□□ -1
HDAC3-206ENST00000471968 MIS18AQ9NYP9 233 aa8.78□□□□□ -1
HDAC3-206ENST00000471968 MSRAQ9UJ68 235 aa8.78□□□□□ -1
HDAC3-206ENST00000471968 PLXNA1Q9UIW2 1896 aa8.78□□□□□ -1
HDAC3-206ENST00000471968 FAM186AA6NE01 2351 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms