RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 TMOD2Q9NZR1 351 aa24.06■■□□□ 1.44
HDAC7-220ENST00000471235 NAV1Q8NEY1 1877 aa24.06■■□□□ 1.44
HDAC7-220ENST00000471235 SALL3Q9BXA9 1300 aa24.06■■□□□ 1.44
HDAC7-220ENST00000471235 MYH1P12882 1939 aa24.06■■□□□ 1.44
HDAC7-220ENST00000471235 GOLIM4O00461 696 aa24.05■■□□□ 1.44
HDAC7-220ENST00000471235 IDH1O75874 414 aaKnown RBP24.05■■□□□ 1.44
HDAC7-220ENST00000471235 BTDP43251 543 aa24.05■■□□□ 1.44
HDAC7-220ENST00000471235 NAA16Q6N069 864 aaPredicted RBP24.05■■□□□ 1.44
HDAC7-220ENST00000471235 EDC3Q96F86 508 aaKnown RBP24.05■■□□□ 1.44
HDAC7-220ENST00000471235 HAUS7Q99871 368 aa24.05■■□□□ 1.44
HDAC7-220ENST00000471235 ZBTB47Q9UFB7 747 aaPredicted RBP24.05■■□□□ 1.44
HDAC7-220ENST00000471235 IGSF3O75054 1194 aa24.04■■□□□ 1.44
HDAC7-220ENST00000471235 LDHCP07864 332 aa24.04■■□□□ 1.44
HDAC7-220ENST00000471235 RASA3Q14644 834 aa24.04■■□□□ 1.44
HDAC7-220ENST00000471235 TTF1Q15361 905 aaPredicted RBP24.04■■□□□ 1.44
HDAC7-220ENST00000471235 GBA2Q9HCG7 927 aaPredicted RBP24.04■■□□□ 1.44
HDAC7-220ENST00000471235 PAG1Q9NWQ8 432 aa24.04■■□□□ 1.44
HDAC7-220ENST00000471235 ABT1Q9ULW3 272 aaKnown RBP24.04■■□□□ 1.44
HDAC7-220ENST00000471235 GPR75-ASB3A0A0A6YYF3 556 aa24.03■■□□□ 1.44
HDAC7-220ENST00000471235 CENPBP07199 599 aaPredicted RBP24.03■■□□□ 1.44
HDAC7-220ENST00000471235 FKBP1CQ5VVH2 108 aa24.03■■□□□ 1.44
HDAC7-220ENST00000471235 USP40Q9NVE5 1235 aa24.03■■□□□ 1.44
HDAC7-220ENST00000471235 TLL2Q9Y6L7 1015 aa24.03■■□□□ 1.44
HDAC7-220ENST00000471235 DDX60LQ5H9U9 1706 aaKnown RBP24.03■■□□□ 1.44
HDAC7-220ENST00000471235 TTC41PQ6P2S7 1318 aa24.03■■□□□ 1.44
HDAC7-220ENST00000471235 SIPA1L1O43166 1804 aa24.03■■□□□ 1.44
HDAC7-220ENST00000471235 RPAP1Q9BWH6 1393 aaPredicted RBP24.03■■□□□ 1.44
HDAC7-220ENST00000471235 TNNI2P48788 182 aa24.02■■□□□ 1.44
HDAC7-220ENST00000471235 B4GALNT3Q6L9W6 998 aa24.02■■□□□ 1.44
HDAC7-220ENST00000471235 ADGRA1Q86SQ6 560 aa24.02■■□□□ 1.44
HDAC7-220ENST00000471235 LAMB1P07942 1786 aa24.01■■□□□ 1.43
HDAC7-220ENST00000471235 MX1P20591 662 aa24.01■■□□□ 1.43
HDAC7-220ENST00000471235 RHBDL3P58872 404 aa24.01■■□□□ 1.43
HDAC7-220ENST00000471235 MAP3K12Q12852 859 aa24.01■■□□□ 1.43
HDAC7-220ENST00000471235 NFIAQ12857 509 aa24.01■■□□□ 1.43
HDAC7-220ENST00000471235 CDAN1Q8IWY9 1227 aa24.01■■□□□ 1.43
HDAC7-220ENST00000471235 TEPSINQ96N21 525 aa24.01■■□□□ 1.43
HDAC7-220ENST00000471235 LNPKQ9C0E8 428 aa24.01■■□□□ 1.43
HDAC7-220ENST00000471235 TMEM39BQ9GZU3 492 aa24.01■■□□□ 1.43
HDAC7-220ENST00000471235 RASSF10A6NK89 507 aa24■■□□□ 1.43
HDAC7-220ENST00000471235 NF2P35240 595 aa24■■□□□ 1.43
HDAC7-220ENST00000471235 SAPCD2Q86UD0 394 aa24■■□□□ 1.43
HDAC7-220ENST00000471235 FAM83AQ86UY5 434 aa24■■□□□ 1.43
HDAC7-220ENST00000471235 MAGEB6Q8N7X4 407 aa24■■□□□ 1.43
HDAC7-220ENST00000471235 PI4K2BQ8TCG2 481 aa24■■□□□ 1.43
HDAC7-220ENST00000471235 MKRN1Q9UHC7 482 aaKnown RBP24■■□□□ 1.43
HDAC7-220ENST00000471235 CEP350Q5VT06 3117 aa23.99■■□□□ 1.43
HDAC7-220ENST00000471235 CYP7A1P22680 504 aa23.99■■□□□ 1.43
HDAC7-220ENST00000471235 NUCB1Q02818 461 aa23.99■■□□□ 1.43
HDAC7-220ENST00000471235 NBPF12Q5TAG4 269 aaPredicted RBP23.99■■□□□ 1.43
HDAC7-220ENST00000471235 DNAJC5GQ8N7S2 189 aa23.99■■□□□ 1.43
HDAC7-220ENST00000471235 C2orf69Q8N8R5 385 aa23.99■■□□□ 1.43
HDAC7-220ENST00000471235 FAM198AQ9UFP1 575 aa23.99■■□□□ 1.43
HDAC7-220ENST00000471235 PDE6AP16499 860 aa23.98■■□□□ 1.43
HDAC7-220ENST00000471235 MOB2Q70IA6 237 aa23.98■■□□□ 1.43
HDAC7-220ENST00000471235 CHD1LQ86WJ1 897 aa23.98■■□□□ 1.43
HDAC7-220ENST00000471235 NOL10Q9BSC4 688 aaKnown RBP23.98■■□□□ 1.43
HDAC7-220ENST00000471235 IDI2Q9BXS1 227 aa23.98■■□□□ 1.43
HDAC7-220ENST00000471235 AATFQ9NY61 560 aaKnown RBP eCLIP23.98■■□□□ 1.43
HDAC7-220ENST00000471235 ERC2O15083 957 aa23.97■■□□□ 1.43
HDAC7-220ENST00000471235 WDHD1O75717 1129 aaPredicted RBP23.97■■□□□ 1.43
HDAC7-220ENST00000471235 RGS3P49796 1198 aa23.97■■□□□ 1.43
HDAC7-220ENST00000471235 HUNKP57058 714 aa23.97■■□□□ 1.43
HDAC7-220ENST00000471235 FKBP1BP68106 108 aa23.97■■□□□ 1.43
HDAC7-220ENST00000471235 TCP10Q12799 353 aa23.97■■□□□ 1.43
HDAC7-220ENST00000471235 TMED8Q6PL24 325 aaPredicted RBP23.97■■□□□ 1.43
HDAC7-220ENST00000471235 KLRG1Q96E93 195 aa23.97■■□□□ 1.43
HDAC7-220ENST00000471235 ATAD5Q96QE3 1844 aa23.97■■□□□ 1.43
HDAC7-220ENST00000471235 DDX4Q9NQI0 724 aaKnown RBP23.97■■□□□ 1.43
HDAC7-220ENST00000471235 BAZ2AQ9UIF9 1905 aaKnown RBP23.97■■□□□ 1.43
HDAC7-220ENST00000471235 GLRX3O76003 335 aaKnown RBP23.96■■□□□ 1.43
HDAC7-220ENST00000471235 MAP4K4O95819 1239 aaPredicted RBP23.96■■□□□ 1.43
HDAC7-220ENST00000471235 DEFB115Q30KQ5 88 aa23.96■■□□□ 1.43
HDAC7-220ENST00000471235 SUPT20HL1Q3ZLR7 823 aa23.96■■□□□ 1.43
HDAC7-220ENST00000471235 SH3RF3Q8TEJ3 882 aaPredicted RBP23.96■■□□□ 1.43
HDAC7-220ENST00000471235 FAM151AQ8WW52 585 aa23.96■■□□□ 1.43
HDAC7-220ENST00000471235 STAP2Q9UGK3 403 aa23.96■■□□□ 1.43
HDAC7-220ENST00000471235 FZD1Q9UP38 647 aa23.96■■□□□ 1.43
HDAC7-220ENST00000471235 COL2A1P02458 1487 aaPredicted RBP23.95■■□□□ 1.42
HDAC7-220ENST00000471235 BAG3O95817 575 aa23.95■■□□□ 1.42
HDAC7-220ENST00000471235 PDE1AP54750 535 aa23.95■■□□□ 1.42
HDAC7-220ENST00000471235 PPP4CP60510 307 aa23.95■■□□□ 1.42
HDAC7-220ENST00000471235 PRKG1Q13976 671 aa23.95■■□□□ 1.42
HDAC7-220ENST00000471235 TTLL12Q14166 644 aaPredicted RBP23.95■■□□□ 1.42
HDAC7-220ENST00000471235 SLC9C2Q5TAH2 1124 aa23.95■■□□□ 1.42
HDAC7-220ENST00000471235 TEX11Q8IYF3 940 aa23.95■■□□□ 1.42
HDAC7-220ENST00000471235 HHIPL1Q96JK4 782 aa23.95■■□□□ 1.42
HDAC7-220ENST00000471235 DOCK1Q14185 1865 aa23.94■■□□□ 1.42
HDAC7-220ENST00000471235 ZNF532Q9HCE3 1301 aa23.94■■□□□ 1.42
HDAC7-220ENST00000471235 TCRBV5S4A2TA0A5A2 114 aa23.94■■□□□ 1.42
HDAC7-220ENST00000471235 ENTPD3O75355 529 aa23.94■■□□□ 1.42
HDAC7-220ENST00000471235 DYNLL1P63167 89 aaKnown RBP23.94■■□□□ 1.42
HDAC7-220ENST00000471235 PICALMQ13492 652 aa23.94■■□□□ 1.42
HDAC7-220ENST00000471235 ZFPM1Q8IX07 1006 aa23.94■■□□□ 1.42
HDAC7-220ENST00000471235 MIGA1Q8NAN2 632 aa23.94■■□□□ 1.42
HDAC7-220ENST00000471235 MYH8P13535 1937 aa23.93■■□□□ 1.42
HDAC7-220ENST00000471235 PLCG2P16885 1265 aa23.93■■□□□ 1.42
HDAC7-220ENST00000471235 ADD2P35612 726 aa23.93■■□□□ 1.42
HDAC7-220ENST00000471235 ARMC9Q7Z3E5 817 aa23.93■■□□□ 1.42
HDAC7-220ENST00000471235 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.93■■□□□ 1.421e-7■■■■□ 25.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms