RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 MAGEB6Q8N7X4 407 aa15.26■□□□□ 0.03
SPTLC1-204ENST00000469778 RNF113AO15541 343 aaKnown RBP15.25■□□□□ 0.03
SPTLC1-204ENST00000469778 ADD2P35612 726 aa15.25■□□□□ 0.03
SPTLC1-204ENST00000469778 TSHZ3Q63HK5 1081 aa15.25■□□□□ 0.03
SPTLC1-204ENST00000469778 ZNF384Q8TF68 577 aa15.25■□□□□ 0.03
SPTLC1-204ENST00000469778 HOOK2Q96ED9 719 aa15.25■□□□□ 0.03
SPTLC1-204ENST00000469778 IDI2Q9BXS1 227 aa15.25■□□□□ 0.03
SPTLC1-204ENST00000469778 USP40Q9NVE5 1235 aa15.25■□□□□ 0.03
SPTLC1-204ENST00000469778 ZNF70Q9UC06 446 aaPredicted RBP15.25■□□□□ 0.03
SPTLC1-204ENST00000469778 NDUFB9Q9Y6M9 179 aa15.25■□□□□ 0.03
SPTLC1-204ENST00000469778 RFX7Q2KHR2 1363 aa15.24■□□□□ 0.03
SPTLC1-204ENST00000469778 TCRBV5S4A2TA0A5A2 114 aa15.24■□□□□ 0.03
SPTLC1-204ENST00000469778 TRIM6-TRIM34B2RNG4 842 aa15.24■□□□□ 0.03
SPTLC1-204ENST00000469778 BTDP43251 543 aa15.24■□□□□ 0.03
SPTLC1-204ENST00000469778 TTC22Q5TAA0 569 aa15.24■□□□□ 0.03
SPTLC1-204ENST00000469778 CDC42EP5Q6NZY7 148 aa15.24■□□□□ 0.03
SPTLC1-204ENST00000469778 KRT26Q7Z3Y9 468 aa15.24■□□□□ 0.03
SPTLC1-204ENST00000469778 FSD1Q9BTV5 496 aa15.24■□□□□ 0.03
SPTLC1-204ENST00000469778 TDRD3Q9H7E2 651 aaKnown RBP15.24■□□□□ 0.03
SPTLC1-204ENST00000469778 GGA3Q9NZ52 723 aa15.24■□□□□ 0.03
SPTLC1-204ENST00000469778 ZNF532Q9HCE3 1301 aa15.23■□□□□ 0.03
SPTLC1-204ENST00000469778 ENTPD3O75355 529 aa15.23■□□□□ 0.03
SPTLC1-204ENST00000469778 ITGBL1O95965 494 aaPredicted RBP15.23■□□□□ 0.03
SPTLC1-204ENST00000469778 EDC3Q96F86 508 aaKnown RBP15.23■□□□□ 0.03
SPTLC1-204ENST00000469778 TAOK2Q9UL54 1235 aa15.23■□□□□ 0.03
SPTLC1-204ENST00000469778 ADAMTSL1Q8N6G6 1762 aa15.22■□□□□ 0.03
SPTLC1-204ENST00000469778 MAGEB6P1A0A0J9YX57 407 aa15.22■□□□□ 0.03
SPTLC1-204ENST00000469778 RHBDL3P58872 404 aa15.22■□□□□ 0.03
SPTLC1-204ENST00000469778 SUPT20HL1Q3ZLR7 823 aa15.22■□□□□ 0.03
SPTLC1-204ENST00000469778 MAP1SQ66K74 1059 aaPredicted RBP15.22■□□□□ 0.03
SPTLC1-204ENST00000469778 APPBP2Q92624 585 aa15.22■□□□□ 0.03
SPTLC1-204ENST00000469778 DEFB129Q9H1M3 183 aa15.22■□□□□ 0.03
SPTLC1-204ENST00000469778 POTEIP0CG38 1075 aa15.21■□□□□ 0.03
SPTLC1-204ENST00000469778 POTEJP0CG39 1038 aa15.21■□□□□ 0.03
SPTLC1-204ENST00000469778 GNAT2P19087 354 aa15.21■□□□□ 0.03
SPTLC1-204ENST00000469778 NF2P35240 595 aa15.21■□□□□ 0.03
SPTLC1-204ENST00000469778 BMP2KLQ5H9B9 411 aa15.21■□□□□ 0.03
SPTLC1-204ENST00000469778 FAM151AQ8WW52 585 aa15.21■□□□□ 0.03
SPTLC1-204ENST00000469778 RILPL2Q969X0 211 aa15.21■□□□□ 0.03
SPTLC1-204ENST00000469778 CRNKL1Q9BZJ0 848 aaKnown RBP15.21■□□□□ 0.03
SPTLC1-204ENST00000469778 VEZTQ9HBM0 779 aa15.21■□□□□ 0.03
SPTLC1-204ENST00000469778 HELLSQ9NRZ9 838 aa15.21■□□□□ 0.03
SPTLC1-204ENST00000469778 AATFQ9NY61 560 aaKnown RBP eCLIP15.21■□□□□ 0.03
SPTLC1-204ENST00000469778 CLRN2A0PK11 232 aa15.2■□□□□ 0.02
SPTLC1-204ENST00000469778 MFAP1P55081 439 aaKnown RBP15.2■□□□□ 0.02
SPTLC1-204ENST00000469778 FKBP1BP68106 108 aa15.2■□□□□ 0.02
SPTLC1-204ENST00000469778 RASA3Q14644 834 aa15.2■□□□□ 0.02
SPTLC1-204ENST00000469778 ADGRA1Q86SQ6 560 aa15.2■□□□□ 0.02
SPTLC1-204ENST00000469778 USP48Q86UV5 1035 aa15.2■□□□□ 0.02
SPTLC1-204ENST00000469778 TEX11Q8IYF3 940 aa15.2■□□□□ 0.02
SPTLC1-204ENST00000469778 AIDAQ96BJ3 306 aa15.2■□□□□ 0.02
SPTLC1-204ENST00000469778 DDRGK1Q96HY6 314 aa15.2■□□□□ 0.02
SPTLC1-204ENST00000469778 RIOK1Q9BRS2 568 aaKnown RBP15.2■□□□□ 0.02
SPTLC1-204ENST00000469778 DHX36Q9H2U1 1008 aaKnown RBP15.2■□□□□ 0.02
SPTLC1-204ENST00000469778 PCDHAC2Q9Y5I4 1007 aa15.2■□□□□ 0.02
SPTLC1-204ENST00000469778 DOCK2Q92608 1830 aa15.2■□□□□ 0.02
SPTLC1-204ENST00000469778 MYH2Q9UKX2 1941 aa15.19■□□□□ 0.02
SPTLC1-204ENST00000469778 UNCXA6NJT0 531 aa15.19■□□□□ 0.02
SPTLC1-204ENST00000469778 WDHD1O75717 1129 aaPredicted RBP15.19■□□□□ 0.02
SPTLC1-204ENST00000469778 SDSP20132 328 aa15.19■□□□□ 0.02
SPTLC1-204ENST00000469778 ZMYM1Q5SVZ6 1142 aa15.19■□□□□ 0.02
SPTLC1-204ENST00000469778 GIMAP6Q6P9H5 292 aa15.19■□□□□ 0.02
SPTLC1-204ENST00000469778 GLIS2Q9BZE0 524 aaPredicted RBP15.19■□□□□ 0.02
SPTLC1-204ENST00000469778 ATP8A2Q9NTI2 1148 aa15.19■□□□□ 0.02
SPTLC1-204ENST00000469778 RPAP1Q9BWH6 1393 aaPredicted RBP15.19■□□□□ 0.02
SPTLC1-204ENST00000469778 MAST2Q6P0Q8 1798 aa15.19■□□□□ 0.02
SPTLC1-204ENST00000469778 ASTN2O75129 1339 aaPredicted RBP15.18■□□□□ 0.02
SPTLC1-204ENST00000469778 PASKQ96RG2 1323 aa15.18■□□□□ 0.02
SPTLC1-204ENST00000469778 MCMDC2Q4G0Z9 681 aa15.18■□□□□ 0.02
SPTLC1-204ENST00000469778 SH3RF3Q8TEJ3 882 aaPredicted RBP15.18■□□□□ 0.02
SPTLC1-204ENST00000469778 RUFY2Q8WXA3 655 aa15.18■□□□□ 0.02
SPTLC1-204ENST00000469778 COL2A1P02458 1487 aaPredicted RBP15.17■□□□□ 0.02
SPTLC1-204ENST00000469778 TCP10L2B9ZVM9 353 aa15.17■□□□□ 0.02
SPTLC1-204ENST00000469778 PPP1R12BO60237 982 aaPredicted RBP15.17■□□□□ 0.02
SPTLC1-204ENST00000469778 GSPT1P15170 499 aaKnown RBP15.17■□□□□ 0.02
SPTLC1-204ENST00000469778 USP5P45974 858 aa15.17■□□□□ 0.02
SPTLC1-204ENST00000469778 RGS3P49796 1198 aa15.17■□□□□ 0.02
SPTLC1-204ENST00000469778 MIGA1Q8NAN2 632 aa15.17■□□□□ 0.02
SPTLC1-204ENST00000469778 STRBPQ96SI9 672 aaKnown RBP15.17■□□□□ 0.02
SPTLC1-204ENST00000469778 DIAPH3Q9NSV4 1193 aa15.17■□□□□ 0.02
SPTLC1-204ENST00000469778 C1QTNF8P60827 252 aa15.16■□□□□ 0.02
SPTLC1-204ENST00000469778 DCAF15Q66K64 600 aa15.16■□□□□ 0.02
SPTLC1-204ENST00000469778 FOXP4Q8IVH2 680 aaPredicted RBP15.16■□□□□ 0.02
SPTLC1-204ENST00000469778 OSBP2Q969R2 916 aa15.16■□□□□ 0.02
SPTLC1-204ENST00000469778 CDCA5Q96FF9 252 aa15.16■□□□□ 0.02
SPTLC1-204ENST00000469778 NACAP1Q9BZK3 213 aa15.16■□□□□ 0.02
SPTLC1-204ENST00000469778 PUS7LQ9H0K6 701 aaKnown RBP15.16■□□□□ 0.02
SPTLC1-204ENST00000469778 FAM198AQ9UFP1 575 aa15.16■□□□□ 0.02
SPTLC1-204ENST00000469778 ECM29Q5VYK3 1845 aa15.15■□□□□ 0.02
SPTLC1-204ENST00000469778 CNTNAP1P78357 1384 aa15.15■□□□□ 0.02
SPTLC1-204ENST00000469778 ATRNL1Q5VV63 1379 aa15.15■□□□□ 0.02
SPTLC1-204ENST00000469778 ADM5C9JUS6 153 aa15.15■□□□□ 0.02
SPTLC1-204ENST00000469778 TBC1D12O60347 775 aa15.15■□□□□ 0.02
SPTLC1-204ENST00000469778 MBD4O95243 580 aa15.15■□□□□ 0.02
SPTLC1-204ENST00000469778 APLP1P51693 650 aa15.15■□□□□ 0.02
SPTLC1-204ENST00000469778 DYNLL1P63167 89 aaKnown RBP15.15■□□□□ 0.02
SPTLC1-204ENST00000469778 NFIAQ12857 509 aa15.15■□□□□ 0.02
SPTLC1-204ENST00000469778 CASC1Q6TDU7 716 aa15.15■□□□□ 0.02
SPTLC1-204ENST00000469778 TTC6Q86TZ1 520 aa15.15■□□□□ 0.02
SPTLC1-204ENST00000469778 AMOTL1Q8IY63 956 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms