RNA–Protein interactions for RNA: ENST00000469403.1

AGRN-205, Transcript of agrin, human

TSL 3

Gene AGRN, Length 899 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGRN-205	ENST00000469403	BTD	P43251	543 aa		31.9	■■■□□ 2.7
AGRN-205	ENST00000469403	SLFNL1	Q499Z3	407 aa		31.9	■■■□□ 2.7
AGRN-205	ENST00000469403	RBM26	Q5T8P6	1007 aa	Known RBP	31.9	■■■□□ 2.7
AGRN-205	ENST00000469403	ZNF526	Q8TF50	670 aa	Predicted RBP	31.9	■■■□□ 2.7
AGRN-205	ENST00000469403	NOL10	Q9BSC4	688 aa	Known RBP	31.9	■■■□□ 2.7
AGRN-205	ENST00000469403	NBPF9	Q3BBW0	867 aa		31.89	■■■□□ 2.7
AGRN-205	ENST00000469403	ZC3H15	Q8WU90	426 aa	Known RBP	31.89	■■■□□ 2.7
AGRN-205	ENST00000469403	OSBP2	Q969R2	916 aa		31.89	■■■□□ 2.7
AGRN-205	ENST00000469403	RIOK1	Q9BRS2	568 aa	Known RBP	31.89	■■■□□ 2.7
AGRN-205	ENST00000469403	PLCG2	P16885	1265 aa		31.88	■■■□□ 2.69
AGRN-205	ENST00000469403	CHML	P26374	656 aa		31.88	■■■□□ 2.69
AGRN-205	ENST00000469403	RHBDL3	P58872	404 aa		31.88	■■■□□ 2.69
AGRN-205	ENST00000469403	GPBP1L1	Q9HC44	474 aa	Predicted RBP	31.88	■■■□□ 2.69
AGRN-205	ENST00000469403	HELLS	Q9NRZ9	838 aa		31.88	■■■□□ 2.69
AGRN-205	ENST00000469403	PGAP2	Q9UHJ9	254 aa		31.88	■■■□□ 2.69
AGRN-205	ENST00000469403	MAGEB6P1	A0A0J9YX57	407 aa		31.87	■■■□□ 2.69
AGRN-205	ENST00000469403	MYO1B	O43795	1136 aa		31.87	■■■□□ 2.69
AGRN-205	ENST00000469403	SPDYE2	Q495Y8	402 aa		31.87	■■■□□ 2.69
AGRN-205	ENST00000469403	CDC42EP5	Q6NZY7	148 aa		31.87	■■■□□ 2.69
AGRN-205	ENST00000469403	PUS7L	Q9H0K6	701 aa	Known RBP	31.87	■■■□□ 2.69
AGRN-205	ENST00000469403	DIAPH3	Q9NSV4	1193 aa		31.87	■■■□□ 2.69
AGRN-205	ENST00000469403	AATF	Q9NY61	560 aa	Known RBP eCLIP	31.87	■■■□□ 2.69
AGRN-205	ENST00000469403	NMI	Q13287	307 aa	Predicted RBP	31.86	■■■□□ 2.69
AGRN-205	ENST00000469403	MIGA1	Q8NAN2	632 aa		31.86	■■■□□ 2.69
AGRN-205	ENST00000469403	TDRD3	Q9H7E2	651 aa	Known RBP	31.86	■■■□□ 2.69
AGRN-205	ENST00000469403	FKBP1C	Q5VVH2	108 aa		31.85	■■■□□ 2.69
AGRN-205	ENST00000469403	FAM227B	Q96M60	508 aa		31.85	■■■□□ 2.69
AGRN-205	ENST00000469403	USP40	Q9NVE5	1235 aa		31.85	■■■□□ 2.69
AGRN-205	ENST00000469403	ZNF70	Q9UC06	446 aa	Predicted RBP	31.85	■■■□□ 2.69
AGRN-205	ENST00000469403	PITPNM2	Q9BZ72	1349 aa		31.84	■■■□□ 2.69
AGRN-205	ENST00000469403		A0A0D9SFI3	127 aa		31.84	■■■□□ 2.69
AGRN-205	ENST00000469403	DYNLL1	P63167	89 aa	Known RBP	31.84	■■■□□ 2.69
AGRN-205	ENST00000469403		M0R2C6	588 aa		31.83	■■■□□ 2.69
AGRN-205	ENST00000469403	CDC45	O75419	566 aa		31.83	■■■□□ 2.69
AGRN-205	ENST00000469403	MCMDC2	Q4G0Z9	681 aa		31.83	■■■□□ 2.69
AGRN-205	ENST00000469403	AIDA	Q96BJ3	306 aa		31.83	■■■□□ 2.69
AGRN-205	ENST00000469403	CDK5RAP2	Q96SN8	1893 aa		31.82	■■■□□ 2.69
AGRN-205	ENST00000469403	FOCAD	Q5VW36	1801 aa		31.82	■■■□□ 2.68
AGRN-205	ENST00000469403	NPM3	O75607	178 aa	Known RBP	31.82	■■■□□ 2.68
AGRN-205	ENST00000469403	MBD4	O95243	580 aa		31.82	■■■□□ 2.68
AGRN-205	ENST00000469403	LCORL	Q8N3X6	602 aa		31.82	■■■□□ 2.68
AGRN-205	ENST00000469403	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	31.82	■■■□□ 2.68
AGRN-205	ENST00000469403	SEC62	Q99442	399 aa	Known RBP	31.82	■■■□□ 2.68
AGRN-205	ENST00000469403	IDI2	Q9BXS1	227 aa		31.82	■■■□□ 2.68
AGRN-205	ENST00000469403	ASTN2	O75129	1339 aa	Predicted RBP	31.81	■■■□□ 2.68
AGRN-205	ENST00000469403	RAD50	Q92878	1312 aa		31.81	■■■□□ 2.68
AGRN-205	ENST00000469403	EAPP	Q56P03	285 aa	Predicted RBP	31.81	■■■□□ 2.68
AGRN-205	ENST00000469403	ZNF784	Q8NCA9	323 aa	Predicted RBP	31.81	■■■□□ 2.68
AGRN-205	ENST00000469403	RUFY2	Q8WXA3	655 aa		31.81	■■■□□ 2.68
AGRN-205	ENST00000469403	STRBP	Q96SI9	672 aa	Known RBP	31.81	■■■□□ 2.68
AGRN-205	ENST00000469403	ARMT1	Q9H993	441 aa		31.81	■■■□□ 2.68
AGRN-205	ENST00000469403	TMOD2	Q9NZR1	351 aa		31.81	■■■□□ 2.68
AGRN-205	ENST00000469403	GPAA1	O43292	621 aa		31.8	■■■□□ 2.68
AGRN-205	ENST00000469403	WDHD1	O75717	1129 aa	Predicted RBP	31.8	■■■□□ 2.68
AGRN-205	ENST00000469403	ANGEL2	Q5VTE6	544 aa	Known RBP	31.8	■■■□□ 2.68
AGRN-205	ENST00000469403	CWC27	Q6UX04	472 aa	Known RBP	31.8	■■■□□ 2.68
AGRN-205	ENST00000469403	LDHD	Q86WU2	507 aa		31.8	■■■□□ 2.68
AGRN-205	ENST00000469403	GGA3	Q9NZ52	723 aa		31.8	■■■□□ 2.68
AGRN-205	ENST00000469403	CLRN2	A0PK11	232 aa		31.79	■■■□□ 2.68
AGRN-205	ENST00000469403	KIF3C	O14782	793 aa		31.79	■■■□□ 2.68
AGRN-205	ENST00000469403	APOBEC3F	Q8IUX4	373 aa	Known RBP	31.79	■■■□□ 2.68
AGRN-205	ENST00000469403	TEX11	Q8IYF3	940 aa		31.79	■■■□□ 2.68
AGRN-205	ENST00000469403	CRNKL1	Q9BZJ0	848 aa	Known RBP	31.79	■■■□□ 2.68
AGRN-205	ENST00000469403	GNAT2	P19087	354 aa		31.77	■■■□□ 2.68
AGRN-205	ENST00000469403	MFAP1	P55081	439 aa	Known RBP	31.77	■■■□□ 2.68
AGRN-205	ENST00000469403	FAM83A	Q86UY5	434 aa		31.77	■■■□□ 2.68
AGRN-205	ENST00000469403	CCDC171	Q6TFL3	1326 aa		31.76	■■■□□ 2.68
AGRN-205	ENST00000469403	SGSM2	O43147	1006 aa		31.76	■■■□□ 2.67
AGRN-205	ENST00000469403	ENTPD3	O75355	529 aa		31.76	■■■□□ 2.67
AGRN-205	ENST00000469403	POTEI	P0CG38	1075 aa		31.76	■■■□□ 2.67
AGRN-205	ENST00000469403	POTEJ	P0CG39	1038 aa		31.76	■■■□□ 2.67
AGRN-205	ENST00000469403	TNFAIP1	Q13829	316 aa		31.76	■■■□□ 2.67
AGRN-205	ENST00000469403	CASC1	Q6TDU7	716 aa		31.76	■■■□□ 2.67
AGRN-205	ENST00000469403	DCPS	Q96C86	337 aa	Known RBP	31.76	■■■□□ 2.67
AGRN-205	ENST00000469403	RPAP1	Q9BWH6	1393 aa	Predicted RBP	31.76	■■■□□ 2.67
AGRN-205	ENST00000469403	CACNB3	P54284	484 aa		31.75	■■■□□ 2.67
AGRN-205	ENST00000469403	NFIA	Q12857	509 aa		31.75	■■■□□ 2.67
AGRN-205	ENST00000469403	ZNF589	Q86UQ0	364 aa	Predicted RBP	31.75	■■■□□ 2.67
AGRN-205	ENST00000469403	VEZT	Q9HBM0	779 aa		31.75	■■■□□ 2.67
AGRN-205	ENST00000469403	FAM198A	Q9UFP1	575 aa		31.75	■■■□□ 2.67
AGRN-205	ENST00000469403	MKRN1	Q9UHC7	482 aa	Known RBP	31.75	■■■□□ 2.67
AGRN-205	ENST00000469403	POLR2A	P24928	1970 aa	Known RBP	31.75	■■■□□ 2.67
AGRN-205	ENST00000469403	COL2A1	P02458	1487 aa	Predicted RBP	31.74	■■■□□ 2.67
AGRN-205	ENST00000469403	CNTNAP1	P78357	1384 aa		31.74	■■■□□ 2.67
AGRN-205	ENST00000469403	CCDC129	Q6ZRS4	1044 aa		31.74	■■■□□ 2.67
AGRN-205	ENST00000469403	ESYT1	Q9BSJ8	1104 aa		31.74	■■■□□ 2.67
AGRN-205	ENST00000469403	DDX4	Q9NQI0	724 aa	Known RBP	31.74	■■■□□ 2.67
AGRN-205	ENST00000469403	ATP8A2	Q9NTI2	1148 aa		31.74	■■■□□ 2.67
AGRN-205	ENST00000469403	TNNI2	P48788	182 aa		31.73	■■■□□ 2.67
AGRN-205	ENST00000469403	GIMAP6	Q6P9H5	292 aa		31.73	■■■□□ 2.67
AGRN-205	ENST00000469403	TGFBRAP1	Q8WUH2	860 aa		31.73	■■■□□ 2.67
AGRN-205	ENST00000469403	IL25	Q9H293	177 aa		31.73	■■■□□ 2.67
AGRN-205	ENST00000469403	CLEC11A	Q9Y240	323 aa		31.73	■■■□□ 2.67
AGRN-205	ENST00000469403	PPP2R3B	Q9Y5P8	575 aa		31.73	■■■□□ 2.67
AGRN-205	ENST00000469403	SLC4A4	Q9Y6R1	1079 aa		31.73	■■■□□ 2.67
AGRN-205	ENST00000469403	TCP10L2	B9ZVM9	353 aa		31.72	■■■□□ 2.67
AGRN-205	ENST00000469403	FAM151A	Q8WW52	585 aa		31.72	■■■□□ 2.67
AGRN-205	ENST00000469403	FLT1	P17948	1338 aa		31.72	■■■□□ 2.67
AGRN-205	ENST00000469403	DDX60L	Q5H9U9	1706 aa	Known RBP	31.72	■■■□□ 2.67
AGRN-205	ENST00000469403	GSG1L2	A8MUP6	293 aa		31.71	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms