RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 MAP3K12Q12852 859 aa28.36■■■□□ 2.13
SUMO3-205ENST00000466861 DLK2Q6UY11 383 aa28.36■■■□□ 2.13
SUMO3-205ENST00000466861 KLRG1Q96E93 195 aa28.36■■■□□ 2.13
SUMO3-205ENST00000466861 HAUS7Q99871 368 aa28.36■■■□□ 2.13
SUMO3-205ENST00000466861 TTC41PQ6P2S7 1318 aa28.36■■■□□ 2.13
SUMO3-205ENST00000466861 DEFB115Q30KQ5 88 aa28.35■■■□□ 2.13
SUMO3-205ENST00000466861 ANKRD45Q5TZF3 282 aa28.35■■■□□ 2.13
SUMO3-205ENST00000466861 NAA16Q6N069 864 aaPredicted RBP28.35■■■□□ 2.13
SUMO3-205ENST00000466861 IDI2Q9BXS1 227 aa28.35■■■□□ 2.13
SUMO3-205ENST00000466861 RPAP1Q9BWH6 1393 aaPredicted RBP28.35■■■□□ 2.13
SUMO3-205ENST00000466861 BTDP43251 543 aa28.34■■■□□ 2.13
SUMO3-205ENST00000466861 CERS3Q8IU89 383 aa28.34■■■□□ 2.13
SUMO3-205ENST00000466861 USP40Q9NVE5 1235 aa28.34■■■□□ 2.13
SUMO3-205ENST00000466861 SCAF8Q9UPN6 1271 aaKnown RBP28.34■■■□□ 2.13
SUMO3-205ENST00000466861 TCP10L2B9ZVM9 353 aa28.33■■■□□ 2.13
SUMO3-205ENST00000466861 NPM3O75607 178 aaKnown RBP28.33■■■□□ 2.13
SUMO3-205ENST00000466861 HOOK2Q96ED9 719 aa28.33■■■□□ 2.13
SUMO3-205ENST00000466861 NOL10Q9BSC4 688 aaKnown RBP28.33■■■□□ 2.13
SUMO3-205ENST00000466861 BCL11AQ9H165 835 aa28.33■■■□□ 2.13
SUMO3-205ENST00000466861 BOLA2Q9H3K6 86 aa28.33■■■□□ 2.13
SUMO3-205ENST00000466861 ERC2O15083 957 aa28.32■■■□□ 2.12
SUMO3-205ENST00000466861 IDH1O75874 414 aaKnown RBP28.32■■■□□ 2.12
SUMO3-205ENST00000466861 BAG3O95817 575 aa28.32■■■□□ 2.12
SUMO3-205ENST00000466861 IGHDP01880 384 aa28.32■■■□□ 2.12
SUMO3-205ENST00000466861 PLCG2P16885 1265 aa28.32■■■□□ 2.12
SUMO3-205ENST00000466861 PPP4CP60510 307 aa28.32■■■□□ 2.12
SUMO3-205ENST00000466861 IRX6P78412 446 aaPredicted RBP28.32■■■□□ 2.12
SUMO3-205ENST00000466861 FAM151AQ8WW52 585 aa28.32■■■□□ 2.12
SUMO3-205ENST00000466861 ANTXR1Q9H6X2 564 aa28.32■■■□□ 2.12
SUMO3-205ENST00000466861 PAG1Q9NWQ8 432 aa28.32■■■□□ 2.12
SUMO3-205ENST00000466861 UNCXA6NJT0 531 aa28.31■■■□□ 2.12
SUMO3-205ENST00000466861 ENTPD3O75355 529 aa28.31■■■□□ 2.12
SUMO3-205ENST00000466861 ECE1P42892 770 aa28.31■■■□□ 2.12
SUMO3-205ENST00000466861 PRAMEF18Q5VWM3 479 aa28.31■■■□□ 2.12
SUMO3-205ENST00000466861 ARMC9Q7Z3E5 817 aa28.31■■■□□ 2.12
SUMO3-205ENST00000466861 TEPSINQ96N21 525 aa28.31■■■□□ 2.12
SUMO3-205ENST00000466861 DNAJC2Q99543 621 aaKnown RBP28.31■■■□□ 2.12
SUMO3-205ENST00000466861 RFX7Q2KHR2 1363 aa28.3■■■□□ 2.12
SUMO3-205ENST00000466861 GOLIM4O00461 696 aa28.3■■■□□ 2.12
SUMO3-205ENST00000466861 PPP1R12BO60237 982 aaPredicted RBP28.3■■■□□ 2.12
SUMO3-205ENST00000466861 HUNKP57058 714 aa28.3■■■□□ 2.12
SUMO3-205ENST00000466861 RHBDL3P58872 404 aa28.3■■■□□ 2.12
SUMO3-205ENST00000466861 MAP3K11Q16584 847 aa28.3■■■□□ 2.12
SUMO3-205ENST00000466861 SALL3Q9BXA9 1300 aa28.29■■■□□ 2.12
SUMO3-205ENST00000466861 GLRX3O76003 335 aaKnown RBP28.29■■■□□ 2.12
SUMO3-205ENST00000466861 CACNB3P54284 484 aa28.29■■■□□ 2.12
SUMO3-205ENST00000466861 NDUFB9Q9Y6M9 179 aa28.29■■■□□ 2.12
SUMO3-205ENST00000466861 CENPBP07199 599 aaPredicted RBP28.28■■■□□ 2.12
SUMO3-205ENST00000466861 MX1P20591 662 aa28.28■■■□□ 2.12
SUMO3-205ENST00000466861 NBPF12Q5TAG4 269 aaPredicted RBP28.28■■■□□ 2.12
SUMO3-205ENST00000466861 TMEM39BQ9GZU3 492 aa28.28■■■□□ 2.12
SUMO3-205ENST00000466861 MKRN1Q9UHC7 482 aaKnown RBP28.28■■■□□ 2.12
SUMO3-205ENST00000466861 MYH7P12883 1935 aa28.28■■■□□ 2.12
SUMO3-205ENST00000466861 WDHD1O75717 1129 aaPredicted RBP28.27■■■□□ 2.12
SUMO3-205ENST00000466861 CYP7A1P22680 504 aa28.27■■■□□ 2.12
SUMO3-205ENST00000466861 JMYQ8N9B5 988 aa28.27■■■□□ 2.12
SUMO3-205ENST00000466861 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.27■■■□□ 2.12
SUMO3-205ENST00000466861 FAM198AQ9UFP1 575 aa28.27■■■□□ 2.12
SUMO3-205ENST00000466861 STAP2Q9UGK3 403 aa28.27■■■□□ 2.12
SUMO3-205ENST00000466861 SSC5DA1L4H1 1573 aa28.27■■■□□ 2.12
SUMO3-205ENST00000466861 NUCB1Q02818 461 aa28.26■■■□□ 2.11
SUMO3-205ENST00000466861 MAGEB6Q8N7X4 407 aa28.26■■■□□ 2.11
SUMO3-205ENST00000466861 AK9Q5TCS8 1911 aa28.26■■■□□ 2.11
SUMO3-205ENST00000466861 NFIAQ12857 509 aa28.25■■■□□ 2.11
SUMO3-205ENST00000466861 TTLL12Q14166 644 aaPredicted RBP28.25■■■□□ 2.11
SUMO3-205ENST00000466861 ZSCAN25Q6NSZ9 544 aa28.25■■■□□ 2.11
SUMO3-205ENST00000466861 RGMBQ6NW40 437 aa28.25■■■□□ 2.11
SUMO3-205ENST00000466861 CHD1LQ86WJ1 897 aa28.25■■■□□ 2.11
SUMO3-205ENST00000466861 COL2A1P02458 1487 aaPredicted RBP28.25■■■□□ 2.11
SUMO3-205ENST00000466861 PDE6AP16499 860 aa28.24■■■□□ 2.11
SUMO3-205ENST00000466861 RGS3P49796 1198 aa28.24■■■□□ 2.11
SUMO3-205ENST00000466861 LDLRAD1Q5T700 205 aa28.24■■■□□ 2.11
SUMO3-205ENST00000466861 SLC9C2Q5TAH2 1124 aa28.24■■■□□ 2.11
SUMO3-205ENST00000466861 PI4K2BQ8TCG2 481 aa28.24■■■□□ 2.11
SUMO3-205ENST00000466861 CCDC102AQ96A19 550 aa28.24■■■□□ 2.11
SUMO3-205ENST00000466861 CAPNS2Q96L46 248 aa28.24■■■□□ 2.11
SUMO3-205ENST00000466861 IREB2P48200 963 aaKnown RBP28.23■■■□□ 2.11
SUMO3-205ENST00000466861 VEGFBP49765 207 aa28.23■■■□□ 2.11
SUMO3-205ENST00000466861 DCAF15Q66K64 600 aa28.23■■■□□ 2.11
SUMO3-205ENST00000466861 ADGRA1Q86SQ6 560 aa28.23■■■□□ 2.11
SUMO3-205ENST00000466861 TEX11Q8IYF3 940 aa28.23■■■□□ 2.11
SUMO3-205ENST00000466861 AATFQ9NY61 560 aaKnown RBP eCLIP28.23■■■□□ 2.11
SUMO3-205ENST00000466861 FOCADQ5VW36 1801 aa28.22■■■□□ 2.11
SUMO3-205ENST00000466861 WDR33Q9C0J8 1336 aaKnown RBP28.22■■■□□ 2.11
SUMO3-205ENST00000466861 LRRFIP1Q32MZ4 808 aaKnown RBP28.22■■■□□ 2.11
SUMO3-205ENST00000466861 KBTBD3Q8NAB2 608 aa28.22■■■□□ 2.11
SUMO3-205ENST00000466861 OTUD7AQ8TE49 926 aaPredicted RBP28.22■■■□□ 2.11
SUMO3-205ENST00000466861 EDC3Q96F86 508 aaKnown RBP28.22■■■□□ 2.11
SUMO3-205ENST00000466861 LNPKQ9C0E8 428 aa28.22■■■□□ 2.11
SUMO3-205ENST00000466861 ANGEL1Q9UNK9 670 aaKnown RBP28.22■■■□□ 2.11
SUMO3-205ENST00000466861 TCRBV5S4A2TA0A5A2 114 aa28.21■■■□□ 2.11
SUMO3-205ENST00000466861 UBE2Q2LH0YL09 131 aa28.21■■■□□ 2.11
SUMO3-205ENST00000466861 USP2O75604 605 aaPredicted RBP28.21■■■□□ 2.11
SUMO3-205ENST00000466861 ADD2P35612 726 aa28.21■■■□□ 2.11
SUMO3-205ENST00000466861 MAP2K2P36507 400 aa28.21■■■□□ 2.11
SUMO3-205ENST00000466861 PDE1AP54750 535 aa28.21■■■□□ 2.11
SUMO3-205ENST00000466861 TCP10Q12799 353 aa28.21■■■□□ 2.11
SUMO3-205ENST00000466861 UBE3CQ15386 1083 aa28.21■■■□□ 2.11
SUMO3-205ENST00000466861 CEP350Q5VT06 3117 aa28.21■■■□□ 2.11
SUMO3-205ENST00000466861 ATRNL1Q5VV63 1379 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms