RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 USP17L3A6NCW0 530 aa18.37■□□□□ 0.53
GYPC-205ENST00000464053 USP17L4A6NCW7 530 aa18.37■□□□□ 0.53
GYPC-205ENST00000464053 ZNF213O14771 459 aa18.37■□□□□ 0.53
GYPC-205ENST00000464053 LDHCP07864 332 aa18.37■□□□□ 0.53
GYPC-205ENST00000464053 PSMA5P28066 241 aa18.37■□□□□ 0.53
GYPC-205ENST00000464053 USP17L1Q7RTZ2 530 aa18.37■□□□□ 0.53
GYPC-205ENST00000464053 NEK1Q96PY6 1258 aa18.37■□□□□ 0.53
GYPC-205ENST00000464053 FHDC1Q9C0D6 1143 aaPredicted RBP18.37■□□□□ 0.53
GYPC-205ENST00000464053 NAPBQ9H115 298 aa18.37■□□□□ 0.53
GYPC-205ENST00000464053 CYP46A1Q9Y6A2 500 aa18.37■□□□□ 0.53
GYPC-205ENST00000464053 ZMYM6O95789 1325 aa18.37■□□□□ 0.53
GYPC-205ENST00000464053 NFKBIEO00221 500 aa18.36■□□□□ 0.53
GYPC-205ENST00000464053 AK2P54819 239 aa18.36■□□□□ 0.53
GYPC-205ENST00000464053 BLOC1S2Q6QNY1 142 aa18.36■□□□□ 0.53
GYPC-205ENST00000464053 NOL8Q76FK4 1167 aaKnown RBP18.36■□□□□ 0.53
GYPC-205ENST00000464053 SH3RF3Q8TEJ3 882 aaPredicted RBP18.36■□□□□ 0.53
GYPC-205ENST00000464053 TCEANC2Q96MN5 208 aa18.36■□□□□ 0.53
GYPC-205ENST00000464053 PDRG1Q9NUG6 133 aa18.36■□□□□ 0.53
GYPC-205ENST00000464053 TTF2Q9UNY4 1162 aaKnown RBP18.36■□□□□ 0.53
GYPC-205ENST00000464053 SUGT1Q9Y2Z0 365 aa18.36■□□□□ 0.53
GYPC-205ENST00000464053 ADAMTSL1Q8N6G6 1762 aa18.36■□□□□ 0.53
GYPC-205ENST00000464053 PSME4Q14997 1843 aa18.36■□□□□ 0.53
GYPC-205ENST00000464053 ARFGEF1Q9Y6D6 1849 aa18.36■□□□□ 0.53
GYPC-205ENST00000464053 RPS6KB1P23443 525 aa18.35■□□□□ 0.53
GYPC-205ENST00000464053 IARSP41252 1262 aaKnown RBP18.35■□□□□ 0.53
GYPC-205ENST00000464053 BTDP43251 543 aa18.35■□□□□ 0.53
GYPC-205ENST00000464053 TDO2P48775 406 aa18.35■□□□□ 0.53
GYPC-205ENST00000464053 FAM163AQ96GL9 167 aaPredicted RBP18.35■□□□□ 0.53
GYPC-205ENST00000464053 LARP6Q9BRS8 491 aaKnown RBP18.35■□□□□ 0.53
GYPC-205ENST00000464053 NACAP1Q9BZK3 213 aa18.35■□□□□ 0.53
GYPC-205ENST00000464053 TAOK3Q9H2K8 898 aa18.35■□□□□ 0.53
GYPC-205ENST00000464053 GAKO14976 1311 aa18.35■□□□□ 0.53
GYPC-205ENST00000464053 GPR75-ASB3A0A0A6YYF3 556 aa18.35■□□□□ 0.53
GYPC-205ENST00000464053 SCNN1DP51172 638 aa18.35■□□□□ 0.53
GYPC-205ENST00000464053 PPP4CP60510 307 aa18.35■□□□□ 0.53
GYPC-205ENST00000464053 TBC1D10CQ8IV04 446 aa18.35■□□□□ 0.53
GYPC-205ENST00000464053 CRNKL1Q9BZJ0 848 aaKnown RBP18.35■□□□□ 0.53
GYPC-205ENST00000464053 VPS33BQ9H267 617 aa18.35■□□□□ 0.53
GYPC-205ENST00000464053 CDK5RAP2Q96SN8 1893 aa18.34■□□□□ 0.53
GYPC-205ENST00000464053 BAG3O95817 575 aa18.34■□□□□ 0.53
GYPC-205ENST00000464053 FKBP1AP62942 108 aaKnown RBP18.34■□□□□ 0.53
GYPC-205ENST00000464053 DAGLAQ9Y4D2 1042 aa18.34■□□□□ 0.53
GYPC-205ENST00000464053 TACC3Q9Y6A5 838 aa18.34■□□□□ 0.53
GYPC-205ENST00000464053 SMIM22K7EJ46 135 aa18.33■□□□□ 0.53
GYPC-205ENST00000464053 CTDSPL2Q05D32 466 aa18.33■□□□□ 0.53
GYPC-205ENST00000464053 KIAA0825Q8IV33 1275 aa18.33■□□□□ 0.53
GYPC-205ENST00000464053 SLF2Q8IX21 1173 aa18.33■□□□□ 0.53
GYPC-205ENST00000464053 NKX2-3Q8TAU0 364 aa18.33■□□□□ 0.53
GYPC-205ENST00000464053 DCP1AQ9NPI6 582 aaPredicted RBP18.33■□□□□ 0.53
GYPC-205ENST00000464053 INCENPQ9NQS7 918 aa18.33■□□□□ 0.53
GYPC-205ENST00000464053 RAD17O75943 681 aa18.33■□□□□ 0.52
GYPC-205ENST00000464053 NOL10Q9BSC4 688 aaKnown RBP18.33■□□□□ 0.52
GYPC-205ENST00000464053 CYP2D7A0A087X1C5 515 aa18.32■□□□□ 0.52
GYPC-205ENST00000464053 MCM2P49736 904 aa18.32■□□□□ 0.52
GYPC-205ENST00000464053 RASSF7Q02833 373 aa18.32■□□□□ 0.52
GYPC-205ENST00000464053 TMX3Q96JJ7 454 aa18.32■□□□□ 0.52
GYPC-205ENST00000464053 MINDY4BA8MYZ0 360 aa18.31■□□□□ 0.52
GYPC-205ENST00000464053 PRELPP51888 382 aa18.31■□□□□ 0.52
GYPC-205ENST00000464053 RHBDL3P58872 404 aa18.31■□□□□ 0.52
GYPC-205ENST00000464053 EXOSC10Q01780 885 aaKnown RBP18.31■□□□□ 0.52
GYPC-205ENST00000464053 EVX2Q03828 476 aa18.31■□□□□ 0.52
GYPC-205ENST00000464053 PPARAQ07869 468 aa18.31■□□□□ 0.52
GYPC-205ENST00000464053 GIMAP6Q6P9H5 292 aa18.31■□□□□ 0.52
GYPC-205ENST00000464053 CTR9Q6PD62 1173 aa18.31■□□□□ 0.52
GYPC-205ENST00000464053 DHX32Q7L7V1 743 aaKnown RBP18.31■□□□□ 0.52
GYPC-205ENST00000464053 CHST3Q7LGC8 479 aa18.31■□□□□ 0.52
GYPC-205ENST00000464053 NIM1KQ8IY84 436 aa18.31■□□□□ 0.52
GYPC-205ENST00000464053 IL27Q8NEV9 243 aa18.31■□□□□ 0.52
GYPC-205ENST00000464053 LRRC2Q9BYS8 371 aa18.31■□□□□ 0.52
GYPC-205ENST00000464053 ATP8A2Q9NTI2 1148 aa18.31■□□□□ 0.52
GYPC-205ENST00000464053 FOXD4L1Q9NU39 408 aa18.31■□□□□ 0.52
GYPC-205ENST00000464053 MKRN1Q9UHC7 482 aaKnown RBP18.31■□□□□ 0.52
GYPC-205ENST00000464053 ZNRF3Q9ULT6 936 aa18.31■□□□□ 0.52
GYPC-205ENST00000464053 TIAM2Q8IVF5 1701 aa18.31■□□□□ 0.52
GYPC-205ENST00000464053 PSMD14O00487 310 aa18.3■□□□□ 0.52
GYPC-205ENST00000464053 TOB2Q14106 344 aaPredicted RBP18.3■□□□□ 0.52
GYPC-205ENST00000464053 STK11IPQ8N1F8 1099 aa18.3■□□□□ 0.52
GYPC-205ENST00000464053 PCDHAC2Q9Y5I4 1007 aa18.3■□□□□ 0.52
GYPC-205ENST00000464053 NEDD4P46934 1319 aa18.3■□□□□ 0.52
GYPC-205ENST00000464053 USP17L12C9JPN9 530 aa18.3■□□□□ 0.52
GYPC-205ENST00000464053 USP17L21D6R901 530 aa18.3■□□□□ 0.52
GYPC-205ENST00000464053 HMGB1P09429 215 aaKnown RBP18.3■□□□□ 0.52
GYPC-205ENST00000464053 USP5P45974 858 aa18.3■□□□□ 0.52
GYPC-205ENST00000464053 CRKP46108 304 aa18.3■□□□□ 0.52
GYPC-205ENST00000464053 Q6ZUG5 572 aa18.3■□□□□ 0.52
GYPC-205ENST00000464053 MB21D2Q8IYB1 491 aaPredicted RBP18.3■□□□□ 0.52
GYPC-205ENST00000464053 TGFBRAP1Q8WUH2 860 aa18.3■□□□□ 0.52
GYPC-205ENST00000464053 ALDH8A1Q9H2A2 487 aaPredicted RBP18.3■□□□□ 0.52
GYPC-205ENST00000464053 SLKQ9H2G2 1235 aaPredicted RBP18.3■□□□□ 0.52
GYPC-205ENST00000464053 LTBP3Q9NS15 1303 aa18.29■□□□□ 0.52
GYPC-205ENST00000464053 VIL1P09327 827 aaKnown RBP18.29■□□□□ 0.52
GYPC-205ENST00000464053 CYP2D6P10635 497 aa18.29■□□□□ 0.52
GYPC-205ENST00000464053 HHIPL2Q6UWX4 724 aa18.29■□□□□ 0.52
GYPC-205ENST00000464053 NAV1Q8NEY1 1877 aa18.29■□□□□ 0.52
GYPC-205ENST00000464053 NCOA7Q8NI08 942 aa18.29■□□□□ 0.52
GYPC-205ENST00000464053 TEKT1Q969V4 418 aa18.29■□□□□ 0.52
GYPC-205ENST00000464053 SYT17Q9BSW7 474 aa18.29■□□□□ 0.52
GYPC-205ENST00000464053 LAMB1P07942 1786 aa18.29■□□□□ 0.52
GYPC-205ENST00000464053 LARGE1O95461 756 aa18.28■□□□□ 0.52
GYPC-205ENST00000464053 USP17L8P0C7I0 530 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms