RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 COL11A2P13942 1736 aaPredicted RBP14.59□□□□□ -0.07
COL4A6-204ENST00000461897 QSER1Q2KHR3 1735 aa14.58□□□□□ -0.08
COL4A6-204ENST00000461897 LEO1Q8WVC0 666 aaPredicted RBP14.58□□□□□ -0.08
COL4A6-204ENST00000461897 NEK1Q96PY6 1258 aa14.58□□□□□ -0.08
COL4A6-204ENST00000461897 MRVI1Q9Y6F6 885 aa14.58□□□□□ -0.08
COL4A6-204ENST00000461897 LTBP1Q14766 1721 aa14.58□□□□□ -0.08
COL4A6-204ENST00000461897 GOLGA6L6A8MZA4 724 aa14.57□□□□□ -0.08
COL4A6-204ENST00000461897 FGAP02671 866 aa14.57□□□□□ -0.08
COL4A6-204ENST00000461897 LIG1P18858 919 aa14.57□□□□□ -0.08
COL4A6-204ENST00000461897 RBM10P98175 930 aaKnown RBP14.57□□□□□ -0.08
COL4A6-204ENST00000461897 TYRO3Q06418 890 aa14.57□□□□□ -0.08
COL4A6-204ENST00000461897 RBM17Q96I25 401 aaKnown RBP14.57□□□□□ -0.08
COL4A6-204ENST00000461897 ZNF830Q96NB3 372 aaPredicted RBP14.57□□□□□ -0.08
COL4A6-204ENST00000461897 CLSTN2Q9H4D0 955 aa14.57□□□□□ -0.08
COL4A6-204ENST00000461897 FAM13BQ9NYF5 915 aa14.57□□□□□ -0.08
COL4A6-204ENST00000461897 ANKIB1Q9P2G1 1089 aa14.57□□□□□ -0.08
COL4A6-204ENST00000461897 DENND2AQ9ULE3 1009 aa14.57□□□□□ -0.08
COL4A6-204ENST00000461897 XDHP47989 1333 aa14.57□□□□□ -0.08
COL4A6-204ENST00000461897 SEMA3EO15041 775 aa14.57□□□□□ -0.08
COL4A6-204ENST00000461897 MMP10P09238 476 aa14.57□□□□□ -0.08
COL4A6-204ENST00000461897 HIBADHP31937 336 aaKnown RBP14.57□□□□□ -0.08
COL4A6-204ENST00000461897 PDS5AQ29RF7 1337 aaKnown RBP14.57□□□□□ -0.08
COL4A6-204ENST00000461897 KCNF1Q9H3M0 494 aa14.57□□□□□ -0.08
COL4A6-204ENST00000461897 LRP2BPQ9P2M1 347 aa14.57□□□□□ -0.08
COL4A6-204ENST00000461897 E7EWF7 191 aa14.56□□□□□ -0.08
COL4A6-204ENST00000461897 CAVIN2O95810 425 aa14.56□□□□□ -0.08
COL4A6-204ENST00000461897 RESTQ13127 1097 aa14.56□□□□□ -0.08
COL4A6-204ENST00000461897 MSL1Q68DK7 614 aa14.56□□□□□ -0.08
COL4A6-204ENST00000461897 AIDAQ96BJ3 306 aa14.56□□□□□ -0.08
COL4A6-204ENST00000461897 STRBPQ96SI9 672 aaKnown RBP14.56□□□□□ -0.08
COL4A6-204ENST00000461897 LLPHQ9BRT6 129 aaKnown RBP14.56□□□□□ -0.08
COL4A6-204ENST00000461897 BRIP1Q9BX63 1249 aa14.56□□□□□ -0.08
COL4A6-204ENST00000461897 CTNNA3Q9UI47 895 aa14.56□□□□□ -0.08
COL4A6-204ENST00000461897 LEMD3Q9Y2U8 911 aa14.56□□□□□ -0.08
COL4A6-204ENST00000461897 MBD4O95243 580 aa14.55□□□□□ -0.08
COL4A6-204ENST00000461897 GPSM2P81274 684 aa14.55□□□□□ -0.08
COL4A6-204ENST00000461897 SLC15A2Q16348 729 aa14.55□□□□□ -0.08
COL4A6-204ENST00000461897 ADGRA1Q86SQ6 560 aa14.55□□□□□ -0.08
COL4A6-204ENST00000461897 SMARCC2Q8TAQ2 1214 aa14.55□□□□□ -0.08
COL4A6-204ENST00000461897 SPATA32Q96LK8 384 aa14.55□□□□□ -0.08
COL4A6-204ENST00000461897 CRAMP1Q96RY5 1269 aa14.55□□□□□ -0.08
COL4A6-204ENST00000461897 ZSCAN16Q9H4T2 348 aaPredicted RBP14.55□□□□□ -0.08
COL4A6-204ENST00000461897 ABCF2Q9UG63 623 aa14.55□□□□□ -0.08
COL4A6-204ENST00000461897 MAST2Q6P0Q8 1798 aa14.55□□□□□ -0.08
COL4A6-204ENST00000461897 ZBTB22O15209 634 aa14.55□□□□□ -0.08
COL4A6-204ENST00000461897 HAND2P61296 217 aa14.55□□□□□ -0.08
COL4A6-204ENST00000461897 IMMTQ16891 758 aaKnown RBP14.55□□□□□ -0.08
COL4A6-204ENST00000461897 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.55□□□□□ -0.08
COL4A6-204ENST00000461897 FERMT3Q86UX7 667 aa14.55□□□□□ -0.08
COL4A6-204ENST00000461897 TDRD7Q8NHU6 1098 aaKnown RBP14.55□□□□□ -0.08
COL4A6-204ENST00000461897 TNMDQ9H2S6 317 aa14.55□□□□□ -0.08
COL4A6-204ENST00000461897 DACT1Q9NYF0 836 aa14.55□□□□□ -0.08
COL4A6-204ENST00000461897 BBOX1O75936 387 aa14.54□□□□□ -0.08
COL4A6-204ENST00000461897 HMGB1P09429 215 aaKnown RBP14.54□□□□□ -0.08
COL4A6-204ENST00000461897 ZNF384Q8TF68 577 aa14.54□□□□□ -0.08
COL4A6-204ENST00000461897 GPR101Q96P66 508 aaPredicted RBP14.54□□□□□ -0.08
COL4A6-204ENST00000461897 AGXT2Q9BYV1 514 aa14.54□□□□□ -0.08
COL4A6-204ENST00000461897 ARMT1Q9H993 441 aa14.54□□□□□ -0.08
COL4A6-204ENST00000461897 EPB41L4AQ9HCS5 686 aaPredicted RBP14.54□□□□□ -0.08
COL4A6-204ENST00000461897 PARP3Q9Y6F1 533 aa14.54□□□□□ -0.08
COL4A6-204ENST00000461897 PFKFB2O60825 505 aa14.53□□□□□ -0.08
COL4A6-204ENST00000461897 SRGNP10124 158 aa14.53□□□□□ -0.08
COL4A6-204ENST00000461897 DNTTIP2Q5QJE6 756 aaKnown RBP14.53□□□□□ -0.08
COL4A6-204ENST00000461897 FAM173BQ6P4H8 233 aa14.53□□□□□ -0.08
COL4A6-204ENST00000461897 C15orf52Q6ZUT6 534 aaKnown RBP14.53□□□□□ -0.08
COL4A6-204ENST00000461897 LCORLQ8N3X6 602 aa14.53□□□□□ -0.08
COL4A6-204ENST00000461897 PGBD1Q96JS3 809 aa14.53□□□□□ -0.08
COL4A6-204ENST00000461897 NBPF3Q9H094 633 aa14.53□□□□□ -0.08
COL4A6-204ENST00000461897 RAI14Q9P0K7 980 aa14.53□□□□□ -0.08
COL4A6-204ENST00000461897 ZMYM6O95789 1325 aa14.53□□□□□ -0.08
COL4A6-204ENST00000461897 CYP7A1P22680 504 aa14.52□□□□□ -0.08
COL4A6-204ENST00000461897 EXOSC10Q01780 885 aaKnown RBP14.52□□□□□ -0.08
COL4A6-204ENST00000461897 NAA16Q6N069 864 aaPredicted RBP14.52□□□□□ -0.08
COL4A6-204ENST00000461897 Q6ZUG5 572 aa14.52□□□□□ -0.08
COL4A6-204ENST00000461897 DHX32Q7L7V1 743 aaKnown RBP14.52□□□□□ -0.08
COL4A6-204ENST00000461897 PLA2G4DQ86XP0 818 aa14.52□□□□□ -0.08
COL4A6-204ENST00000461897 MIGA1Q8NAN2 632 aa14.52□□□□□ -0.08
COL4A6-204ENST00000461897 LRRC2Q9BYS8 371 aa14.52□□□□□ -0.08
COL4A6-204ENST00000461897 CBX8Q9HC52 389 aa14.52□□□□□ -0.08
COL4A6-204ENST00000461897 PODXL2Q9NZ53 605 aa14.52□□□□□ -0.08
COL4A6-204ENST00000461897 PYCARDQ9ULZ3 195 aa14.52□□□□□ -0.08
COL4A6-204ENST00000461897 MYH15Q9Y2K3 1946 aa14.52□□□□□ -0.08
COL4A6-204ENST00000461897 CCDC88AQ3V6T2 1871 aa14.52□□□□□ -0.09
COL4A6-204ENST00000461897 GOLGA6L4A6NEF3 574 aa14.52□□□□□ -0.09
COL4A6-204ENST00000461897 PPEF1O14829 653 aaPredicted RBP14.52□□□□□ -0.09
COL4A6-204ENST00000461897 DTNBO60941 627 aa14.52□□□□□ -0.09
COL4A6-204ENST00000461897 UFL1O94874 794 aa14.52□□□□□ -0.09
COL4A6-204ENST00000461897 CHAF1AQ13111 956 aaPredicted RBP14.52□□□□□ -0.09
COL4A6-204ENST00000461897 ALX1Q15699 326 aa14.52□□□□□ -0.09
COL4A6-204ENST00000461897 ATL3Q6DD88 541 aa14.52□□□□□ -0.09
COL4A6-204ENST00000461897 MPNDQ8N594 471 aa14.52□□□□□ -0.09
COL4A6-204ENST00000461897 BRF1Q92994 677 aa14.52□□□□□ -0.09
COL4A6-204ENST00000461897 STK32BQ9NY57 414 aa14.52□□□□□ -0.09
COL4A6-204ENST00000461897 CFAP45Q9UL16 551 aa14.52□□□□□ -0.09
COL4A6-204ENST00000461897 GOLGB1Q14789 3259 aaKnown RBP14.52□□□□□ -0.09
COL4A6-204ENST00000461897 TIAM2Q8IVF5 1701 aa14.52□□□□□ -0.09
COL4A6-204ENST00000461897 KIAA1551Q9HCM1 1747 aa14.52□□□□□ -0.09
COL4A6-204ENST00000461897 CHD4Q14839 1912 aa14.51□□□□□ -0.09
COL4A6-204ENST00000461897 GSG1L2A8MUP6 293 aa14.51□□□□□ -0.09
COL4A6-204ENST00000461897 PATL2C9JE40 543 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms