RNA–Protein interactions for RNA: ENST00000460352.1

MMP11-205, Transcript of matrix metallopeptidase 11, humanhuman

TSL 5

Gene MMP11, Length 918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-205ENST00000460352 ANO2Q9NQ90 1003 aa20.25■□□□□ 0.83
MMP11-205ENST00000460352 GPRC5DQ9NZD1 345 aa20.25■□□□□ 0.83
MMP11-205ENST00000460352 PATL2C9JE40 543 aaKnown RBP20.24■□□□□ 0.83
MMP11-205ENST00000460352 USP5P45974 858 aa20.24■□□□□ 0.83
MMP11-205ENST00000460352 GRIK5Q16478 980 aa20.24■□□□□ 0.83
MMP11-205ENST00000460352 C8orf34Q49A92 452 aa20.24■□□□□ 0.83
MMP11-205ENST00000460352 MICALL2Q8IY33 904 aa20.24■□□□□ 0.83
MMP11-205ENST00000460352 STRBPQ96SI9 672 aaKnown RBP20.24■□□□□ 0.83
MMP11-205ENST00000460352 ATP8A2Q9NTI2 1148 aa20.24■□□□□ 0.83
MMP11-205ENST00000460352 DAGLAQ9Y4D2 1042 aa20.24■□□□□ 0.83
MMP11-205ENST00000460352 SLC4A4Q9Y6R1 1079 aa20.24■□□□□ 0.83
MMP11-205ENST00000460352 DDNO94850 711 aaPredicted RBP20.23■□□□□ 0.83
MMP11-205ENST00000460352 RNF20Q5VTR2 975 aa20.23■□□□□ 0.83
MMP11-205ENST00000460352 GIMAP6Q6P9H5 292 aa20.23■□□□□ 0.83
MMP11-205ENST00000460352 DSCC1Q9BVC3 393 aa20.23■□□□□ 0.83
MMP11-205ENST00000460352 BACH2Q9BYV9 841 aa20.23■□□□□ 0.83
MMP11-205ENST00000460352 USP40Q9NVE5 1235 aa20.23■□□□□ 0.83
MMP11-205ENST00000460352 M0R2C6 588 aa20.22■□□□□ 0.83
MMP11-205ENST00000460352 TEX11Q8IYF3 940 aa20.22■□□□□ 0.83
MMP11-205ENST00000460352 L3MBTL3Q96JM7 780 aaPredicted RBP20.22■□□□□ 0.83
MMP11-205ENST00000460352 SEC62Q99442 399 aaKnown RBP20.22■□□□□ 0.83
MMP11-205ENST00000460352 ARMT1Q9H993 441 aa20.22■□□□□ 0.83
MMP11-205ENST00000460352 ADARB2Q9NS39 739 aaKnown RBP20.22■□□□□ 0.83
MMP11-205ENST00000460352 HACL1Q9UJ83 578 aa20.22■□□□□ 0.83
MMP11-205ENST00000460352 U3KPZ7 1027 aaPredicted RBP20.22■□□□□ 0.83
MMP11-205ENST00000460352 SPDYE2BA6NHP3 402 aa20.21■□□□□ 0.83
MMP11-205ENST00000460352 SPDYE6P0CI01 402 aa20.21■□□□□ 0.83
MMP11-205ENST00000460352 TNNI2P48788 182 aa20.21■□□□□ 0.83
MMP11-205ENST00000460352 TNFAIP1Q13829 316 aa20.21■□□□□ 0.83
MMP11-205ENST00000460352 ZNF384Q8TF68 577 aa20.21■□□□□ 0.83
MMP11-205ENST00000460352 RIOK1Q9BRS2 568 aaKnown RBP20.21■□□□□ 0.83
MMP11-205ENST00000460352 ZNF646O15015 1829 aaPredicted RBP20.2■□□□□ 0.82
MMP11-205ENST00000460352 RBM26Q5T8P6 1007 aaKnown RBP20.2■□□□□ 0.82
MMP11-205ENST00000460352 APOBEC3HQ6NTF7 200 aaKnown RBP20.2■□□□□ 0.82
MMP11-205ENST00000460352 ADGRA1Q86SQ6 560 aa20.2■□□□□ 0.82
MMP11-205ENST00000460352 PNMA8AQ86V59 439 aaPredicted RBP20.2■□□□□ 0.82
MMP11-205ENST00000460352 NAPBQ9H115 298 aa20.2■□□□□ 0.82
MMP11-205ENST00000460352 NPM3O75607 178 aaKnown RBP20.19■□□□□ 0.82
MMP11-205ENST00000460352 SLC3A2P08195 630 aaKnown RBP20.19■□□□□ 0.82
MMP11-205ENST00000460352 HSPD1P10809 573 aaKnown RBP20.19■□□□□ 0.82
MMP11-205ENST00000460352 TDO2P48775 406 aa20.19■□□□□ 0.82
MMP11-205ENST00000460352 DYNLL1P63167 89 aaKnown RBP20.19■□□□□ 0.82
MMP11-205ENST00000460352 KIF4BQ2VIQ3 1234 aa20.19■□□□□ 0.82
MMP11-205ENST00000460352 FKBP1CQ5VVH2 108 aa20.19■□□□□ 0.82
MMP11-205ENST00000460352 USP50Q70EL3 339 aaPredicted RBP20.19■□□□□ 0.82
MMP11-205ENST00000460352 LCORLQ8N3X6 602 aa20.19■□□□□ 0.82
MMP11-205ENST00000460352 GOLGB1Q14789 3259 aaKnown RBP20.18■□□□□ 0.82
MMP11-205ENST00000460352 ZKSCAN1P17029 563 aaPredicted RBP20.18■□□□□ 0.82
MMP11-205ENST00000460352 ALX1Q15699 326 aa20.18■□□□□ 0.82
MMP11-205ENST00000460352 SLFNL1Q499Z3 407 aa20.18■□□□□ 0.82
MMP11-205ENST00000460352 CDC42EP5Q6NZY7 148 aa20.18■□□□□ 0.82
MMP11-205ENST00000460352 CCDC129Q6ZRS4 1044 aa20.18■□□□□ 0.82
MMP11-205ENST00000460352 ZNF589Q86UQ0 364 aaPredicted RBP20.18■□□□□ 0.82
MMP11-205ENST00000460352 SH3RF3Q8TEJ3 882 aaPredicted RBP20.18■□□□□ 0.82
MMP11-205ENST00000460352 MAP4K1Q92918 833 aa20.18■□□□□ 0.82
MMP11-205ENST00000460352 PRMT6Q96LA8 375 aaPredicted RBP20.18■□□□□ 0.82
MMP11-205ENST00000460352 SRCAPQ6ZRS2 3230 aa20.17■□□□□ 0.82
MMP11-205ENST00000460352 IMMTQ16891 758 aaKnown RBP20.17■□□□□ 0.82
MMP11-205ENST00000460352 TDRD3Q9H7E2 651 aaKnown RBP20.17■□□□□ 0.82
MMP11-205ENST00000460352 TAOK2Q9UL54 1235 aa20.17■□□□□ 0.82
MMP11-205ENST00000460352 SCN4AP35499 1836 aa20.17■□□□□ 0.82
MMP11-205ENST00000460352 WNT10BO00744 389 aa20.16■□□□□ 0.82
MMP11-205ENST00000460352 ENTPD3O75355 529 aa20.16■□□□□ 0.82
MMP11-205ENST00000460352 CHGBP05060 677 aa20.16■□□□□ 0.82
MMP11-205ENST00000460352 VEGFAP15692 232 aaPredicted RBP20.16■□□□□ 0.82
MMP11-205ENST00000460352 TBC1D10BQ4KMP7 808 aaPredicted RBP20.16■□□□□ 0.82
MMP11-205ENST00000460352 TTC6Q86TZ1 520 aa20.16■□□□□ 0.82
MMP11-205ENST00000460352 APOBEC3FQ8IUX4 373 aaKnown RBP20.16■□□□□ 0.82
MMP11-205ENST00000460352 IFNL3Q8IZI9 196 aa20.16■□□□□ 0.82
MMP11-205ENST00000460352 TGFBRAP1Q8WUH2 860 aa20.16■□□□□ 0.82
MMP11-205ENST00000460352 IDI2Q9BXS1 227 aa20.16■□□□□ 0.82
MMP11-205ENST00000460352 DHX36Q9H2U1 1008 aaKnown RBP20.16■□□□□ 0.82
MMP11-205ENST00000460352 ZNF287Q9HBT7 754 aa20.16■□□□□ 0.82
MMP11-205ENST00000460352 ARPP21Q9UBL0 812 aaPredicted RBP20.16■□□□□ 0.82
MMP11-205ENST00000460352 ZNF70Q9UC06 446 aaPredicted RBP20.16■□□□□ 0.82
MMP11-205ENST00000460352 ZMYM6O95789 1325 aa20.16■□□□□ 0.82
MMP11-205ENST00000460352 GSG1L2A8MUP6 293 aa20.15■□□□□ 0.82
MMP11-205ENST00000460352 ZNF213O14771 459 aa20.15■□□□□ 0.82
MMP11-205ENST00000460352 POLR3DP05423 398 aaPredicted RBP20.15■□□□□ 0.82
MMP11-205ENST00000460352 EPHX2P34913 555 aa20.15■□□□□ 0.82
MMP11-205ENST00000460352 EPS15P42566 896 aa20.15■□□□□ 0.82
MMP11-205ENST00000460352 RHBDL3P58872 404 aa20.15■□□□□ 0.82
MMP11-205ENST00000460352 SPDYE2Q495Y8 402 aa20.15■□□□□ 0.82
MMP11-205ENST00000460352 SAMD7Q7Z3H4 446 aa20.15■□□□□ 0.82
MMP11-205ENST00000460352 ZC3H15Q8WU90 426 aaKnown RBP20.15■□□□□ 0.82
MMP11-205ENST00000460352 HOOK2Q96ED9 719 aa20.15■□□□□ 0.82
MMP11-205ENST00000460352 USP26Q9BXU7 913 aa20.15■□□□□ 0.82
MMP11-205ENST00000460352 LSG1Q9H089 658 aaKnown RBP20.15■□□□□ 0.82
MMP11-205ENST00000460352 FGAP02671 866 aa20.14■□□□□ 0.81
MMP11-205ENST00000460352 HLA-DOAP06340 250 aa20.14■□□□□ 0.81
MMP11-205ENST00000460352 KRT32Q14532 448 aa20.14■□□□□ 0.81
MMP11-205ENST00000460352 FAM83AQ86UY5 434 aa20.14■□□□□ 0.81
MMP11-205ENST00000460352 IL27Q8NEV9 243 aa20.14■□□□□ 0.81
MMP11-205ENST00000460352 SDR42E1Q8WUS8 393 aa20.14■□□□□ 0.81
MMP11-205ENST00000460352 DCPSQ96C86 337 aaKnown RBP20.14■□□□□ 0.81
MMP11-205ENST00000460352 ZBED3Q96IU2 234 aaPredicted RBP20.14■□□□□ 0.81
MMP11-205ENST00000460352 VEZTQ9HBM0 779 aa20.14■□□□□ 0.81
MMP11-205ENST00000460352 DCP1AQ9NPI6 582 aaPredicted RBP20.14■□□□□ 0.81
MMP11-205ENST00000460352 MCM9Q9NXL9 1143 aa20.14■□□□□ 0.81
MMP11-205ENST00000460352 RBM8AQ9Y5S9 174 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms