RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 PRKG1Q13976 671 aa18.32■□□□□ 0.52
ATG4B-213ENST00000460211 ERICH6Q7L0X2 663 aa18.32■□□□□ 0.52
ATG4B-213ENST00000460211 ARMC9Q7Z3E5 817 aa18.32■□□□□ 0.52
ATG4B-213ENST00000460211 DZIP1Q86YF9 867 aaKnown RBP18.32■□□□□ 0.52
ATG4B-213ENST00000460211 KIF1BPQ96EK5 621 aa18.32■□□□□ 0.52
ATG4B-213ENST00000460211 DBNDD2Q9BQY9 259 aa18.32■□□□□ 0.52
ATG4B-213ENST00000460211 HMG20BQ9P0W2 317 aa18.32■□□□□ 0.52
ATG4B-213ENST00000460211 RASA3Q14644 834 aa18.31■□□□□ 0.52
ATG4B-213ENST00000460211 SIRT2Q8IXJ6 389 aa18.31■□□□□ 0.52
ATG4B-213ENST00000460211 CLASRPQ8N2M8 674 aaKnown RBP18.31■□□□□ 0.52
ATG4B-213ENST00000460211 RHPN1Q8TCX5 695 aa18.31■□□□□ 0.52
ATG4B-213ENST00000460211 TCP10L2B9ZVM9 353 aa18.3■□□□□ 0.52
ATG4B-213ENST00000460211 PPP1R12BO60237 982 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-213ENST00000460211 APOBEC3HQ6NTF7 200 aaKnown RBP18.3■□□□□ 0.52
ATG4B-213ENST00000460211 AACSQ86V21 672 aa18.3■□□□□ 0.52
ATG4B-213ENST00000460211 EAF2Q96CJ1 260 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-213ENST00000460211 CCDC8Q9H0W5 538 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-213ENST00000460211 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-213ENST00000460211 APBB1O00213 710 aa18.29■□□□□ 0.52
ATG4B-213ENST00000460211 GSTO1P78417 241 aa18.29■□□□□ 0.52
ATG4B-213ENST00000460211 PRPF38BQ5VTL8 546 aaKnown RBP18.29■□□□□ 0.52
ATG4B-213ENST00000460211 FKBP1CQ5VVH2 108 aa18.29■□□□□ 0.52
ATG4B-213ENST00000460211 ZNF512BQ96KM6 892 aaPredicted RBP18.29■□□□□ 0.52
ATG4B-213ENST00000460211 DBNLQ9UJU6 430 aaKnown RBP18.29■□□□□ 0.52
ATG4B-213ENST00000460211 DAGLAQ9Y4D2 1042 aa18.29■□□□□ 0.52
ATG4B-213ENST00000460211 AOX1Q06278 1338 aa18.28■□□□□ 0.52
ATG4B-213ENST00000460211 GPR25O00155 361 aa18.28■□□□□ 0.52
ATG4B-213ENST00000460211 LDHCP07864 332 aa18.28■□□□□ 0.52
ATG4B-213ENST00000460211 MCAMP43121 646 aa18.28■□□□□ 0.52
ATG4B-213ENST00000460211 DIXDC1Q155Q3 683 aa18.28■□□□□ 0.52
ATG4B-213ENST00000460211 PKN2Q16513 984 aaKnown RBP18.28■□□□□ 0.52
ATG4B-213ENST00000460211 IL1RAPL2Q9NP60 686 aa18.28■□□□□ 0.52
ATG4B-213ENST00000460211 RAI14Q9P0K7 980 aa18.28■□□□□ 0.52
ATG4B-213ENST00000460211 LRP2BPQ9P2M1 347 aa18.28■□□□□ 0.52
ATG4B-213ENST00000460211 ARAP2Q8WZ64 1704 aa18.28■□□□□ 0.52
ATG4B-213ENST00000460211 IGSF3O75054 1194 aa18.27■□□□□ 0.52
ATG4B-213ENST00000460211 IFIT2P09913 472 aaKnown RBP18.27■□□□□ 0.52
ATG4B-213ENST00000460211 TM4SF4P48230 202 aa18.27■□□□□ 0.52
ATG4B-213ENST00000460211 FAM83AQ86UY5 434 aa18.27■□□□□ 0.52
ATG4B-213ENST00000460211 HOOK2Q96ED9 719 aa18.27■□□□□ 0.52
ATG4B-213ENST00000460211 FAM163AQ96GL9 167 aaPredicted RBP18.27■□□□□ 0.52
ATG4B-213ENST00000460211 R3HDMLQ9H3Y0 253 aa18.27■□□□□ 0.52
ATG4B-213ENST00000460211 ANGEL1Q9UNK9 670 aaKnown RBP18.27■□□□□ 0.52
ATG4B-213ENST00000460211 FZD1Q9UP38 647 aa18.27■□□□□ 0.52
ATG4B-213ENST00000460211 MYH13Q9UKX3 1938 aa18.27■□□□□ 0.51
ATG4B-213ENST00000460211 NBPF12Q5TAG4 269 aaPredicted RBP18.26■□□□□ 0.51
ATG4B-213ENST00000460211 PI16Q6UXB8 463 aa18.26■□□□□ 0.51
ATG4B-213ENST00000460211 SNRKQ9NRH2 765 aa18.26■□□□□ 0.51
ATG4B-213ENST00000460211 USP40Q9NVE5 1235 aa18.26■□□□□ 0.51
ATG4B-213ENST00000460211 IREB2P48200 963 aaKnown RBP18.25■□□□□ 0.51
ATG4B-213ENST00000460211 CACNB3P54284 484 aa18.25■□□□□ 0.51
ATG4B-213ENST00000460211 MECOMQ03112 1051 aa18.25■□□□□ 0.51
ATG4B-213ENST00000460211 SREBF2Q12772 1141 aa18.25■□□□□ 0.51
ATG4B-213ENST00000460211 CDC42EP5Q6NZY7 148 aa18.25■□□□□ 0.51
ATG4B-213ENST00000460211 TBC1D9Q6ZT07 1266 aa18.25■□□□□ 0.51
ATG4B-213ENST00000460211 TMEM39BQ9GZU3 492 aa18.25■□□□□ 0.51
ATG4B-213ENST00000460211 BCL11AQ9H165 835 aa18.25■□□□□ 0.51
ATG4B-213ENST00000460211 TLR7Q9NYK1 1049 aaKnown RBP18.25■□□□□ 0.51
ATG4B-213ENST00000460211 UNCXA6NJT0 531 aa18.24■□□□□ 0.51
ATG4B-213ENST00000460211 FKTNO75072 461 aa18.24■□□□□ 0.51
ATG4B-213ENST00000460211 FBXO46Q6PJ61 603 aaPredicted RBP18.24■□□□□ 0.51
ATG4B-213ENST00000460211 CRBNQ96SW2 442 aa18.24■□□□□ 0.51
ATG4B-213ENST00000460211 NOL10Q9BSC4 688 aaKnown RBP18.24■□□□□ 0.51
ATG4B-213ENST00000460211 LRRCC1Q9C099 1032 aa18.24■□□□□ 0.51
ATG4B-213ENST00000460211 MROH7-TTC4A0A0A0MT08 1334 aa18.23■□□□□ 0.51
ATG4B-213ENST00000460211 GAKO14976 1311 aa18.23■□□□□ 0.51
ATG4B-213ENST00000460211 ZAP70P43403 619 aa18.23■□□□□ 0.51
ATG4B-213ENST00000460211 AAMPQ13685 434 aa18.23■□□□□ 0.51
ATG4B-213ENST00000460211 MAP3K11Q16584 847 aa18.23■□□□□ 0.51
ATG4B-213ENST00000460211 LDLRAD1Q5T700 205 aa18.23■□□□□ 0.51
ATG4B-213ENST00000460211 FAM151AQ8WW52 585 aa18.23■□□□□ 0.51
ATG4B-213ENST00000460211 NSUN4Q96CB9 384 aaKnown RBP18.23■□□□□ 0.51
ATG4B-213ENST00000460211 SLC10A4Q96EP9 437 aa18.23■□□□□ 0.51
ATG4B-213ENST00000460211 TEPSINQ96N21 525 aa18.23■□□□□ 0.51
ATG4B-213ENST00000460211 ECM29Q5VYK3 1845 aa18.23■□□□□ 0.51
ATG4B-213ENST00000460211 GPR75-ASB3A0A0A6YYF3 556 aa18.22■□□□□ 0.51
ATG4B-213ENST00000460211 MAP4K4O95819 1239 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-213ENST00000460211 CYP2E1P05181 493 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-213ENST00000460211 BTDP43251 543 aa18.22■□□□□ 0.51
ATG4B-213ENST00000460211 SPRYD7Q5W111 196 aa18.22■□□□□ 0.51
ATG4B-213ENST00000460211 NAA16Q6N069 864 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-213ENST00000460211 DCAF15Q66K64 600 aa18.21■□□□□ 0.51
ATG4B-213ENST00000460211 ANKRD13AQ8IZ07 590 aa18.21■□□□□ 0.51
ATG4B-213ENST00000460211 DCTPP1Q9H773 170 aa18.21■□□□□ 0.51
ATG4B-213ENST00000460211 USP2O75604 605 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-213ENST00000460211 BAG3O95817 575 aa18.2■□□□□ 0.5
ATG4B-213ENST00000460211 TCP10Q12799 353 aa18.2■□□□□ 0.5
ATG4B-213ENST00000460211 TTF1Q15361 905 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-213ENST00000460211 NOM1Q5C9Z4 860 aaKnown RBP18.2■□□□□ 0.5
ATG4B-213ENST00000460211 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.2■□□□□ 0.5
ATG4B-213ENST00000460211 IDI2Q9BXS1 227 aa18.2■□□□□ 0.5
ATG4B-213ENST00000460211 PCDHB15Q9Y5E8 787 aa18.2■□□□□ 0.5
ATG4B-213ENST00000460211 RPAP1Q9BWH6 1393 aaPredicted RBP18.19■□□□□ 0.5
ATG4B-213ENST00000460211 ENTPD3O75355 529 aa18.19■□□□□ 0.5
ATG4B-213ENST00000460211 IDH1O75874 414 aaKnown RBP18.19■□□□□ 0.5
ATG4B-213ENST00000460211 PLCG2P16885 1265 aa18.19■□□□□ 0.5
ATG4B-213ENST00000460211 MAP3K12Q12852 859 aa18.19■□□□□ 0.5
ATG4B-213ENST00000460211 NFIAQ12857 509 aa18.19■□□□□ 0.5
ATG4B-213ENST00000460211 TMED8Q6PL24 325 aaPredicted RBP18.19■□□□□ 0.5
ATG4B-213ENST00000460211 CLMNQ96JQ2 1002 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms