RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 ZNF287Q9HBT7 754 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 THEGQ9P2T0 379 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 ZRANB1Q9UGI0 708 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.61□□□□□ -1.51
PCDH9-203ENST00000456367 MAGI1Q96QZ7 1491 aaPredicted RBP5.61□□□□□ -1.51
PCDH9-203ENST00000456367 TTC21AQ8NDW8 1320 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 TOPBP1Q92547 1522 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 FYB1O15117 783 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 SMIM24O75264 130 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 PPP1R7Q15435 360 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 NBPF10Q6P3W6 841 aaKnown RBP5.61□□□□□ -1.51
PCDH9-203ENST00000456367 CATIPQ7Z7H3 387 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 UBLCP1Q8WVY7 318 aaPredicted RBP5.61□□□□□ -1.51
PCDH9-203ENST00000456367 KRT23Q9C075 422 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 CCDC8Q9H0W5 538 aaPredicted RBP5.61□□□□□ -1.51
PCDH9-203ENST00000456367 CNNM1Q9NRU3 951 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 HOMER3Q9NSC5 361 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 PARP2Q9UGN5 583 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 MTUS1Q9ULD2 1270 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 CCDC61Q9Y6R9 512 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 A0A1B0GVL5 298 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 CETN3O15182 167 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 ARID4AP29374 1257 aaPredicted RBP5.61□□□□□ -1.51
PCDH9-203ENST00000456367 HPDP32754 393 aaPredicted RBP5.61□□□□□ -1.51
PCDH9-203ENST00000456367 EPHB4P54760 987 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 E2F4Q16254 413 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 WWC2Q6AWC2 1192 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 STXBP4Q6ZWJ1 553 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 VSIG1Q86XK7 387 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 APLFQ8IW19 511 aaPredicted RBP5.61□□□□□ -1.51
PCDH9-203ENST00000456367 SPAG5Q96R06 1193 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 C14orf93Q9H972 538 aaKnown RBP5.61□□□□□ -1.51
PCDH9-203ENST00000456367 BABAM1Q9NWV8 329 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 KCNH3Q9ULD8 1083 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 IKBKGQ9Y6K9 419 aa5.61□□□□□ -1.51
PCDH9-203ENST00000456367 DNAJC8O75937 253 aaPredicted RBP5.6□□□□□ -1.51
PCDH9-203ENST00000456367 CALCOCO2Q13137 446 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 TMEM67Q5HYA8 995 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 CNOT10Q9H9A5 744 aaKnown RBP5.6□□□□□ -1.51
PCDH9-203ENST00000456367 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.6□□□□□ -1.518e-7■■■■■ 145.9
PCDH9-203ENST00000456367 UTP11Q9Y3A2 253 aaKnown RBP5.6□□□□□ -1.51
PCDH9-203ENST00000456367 NFE2L3Q9Y4A8 694 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 ABCC4O15439 1325 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 GCC2Q8IWJ2 1684 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 BTBD11A6QL63 1104 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 SLFN14P0C7P3 912 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 STAT6P42226 847 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 DNA2P51530 1060 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 NMIQ13287 307 aaPredicted RBP5.6□□□□□ -1.51
PCDH9-203ENST00000456367 MTX1Q13505 466 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 PRPF4BQ13523 1007 aaKnown RBP5.6□□□□□ -1.51
PCDH9-203ENST00000456367 KIF6Q6ZMV9 814 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 TBC1D5Q92609 795 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 RUBCNQ92622 972 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 PPP1R12CQ9BZL4 782 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 HYOU1Q9Y4L1 999 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 ABCA5Q8WWZ7 1642 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 REREQ9P2R6 1566 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 KRT9P35527 623 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 CASP8Q14790 479 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 PDCD2Q16342 344 aaPredicted RBP5.6□□□□□ -1.51
PCDH9-203ENST00000456367 ZNF530Q6P9A1 599 aaPredicted RBP5.6□□□□□ -1.51
PCDH9-203ENST00000456367 MCM10Q7L590 875 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 CCDC197Q8NCU1 140 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 OSBPL5Q9H0X9 879 aaPredicted RBP5.6□□□□□ -1.51
PCDH9-203ENST00000456367 NOP53Q9NZM5 478 aaKnown RBP5.6□□□□□ -1.51
PCDH9-203ENST00000456367 SUFUQ9UMX1 484 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 SYNRGQ9UMZ2 1314 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 CMA1P23946 247 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 MARCKSP29966 332 aaPredicted RBP5.6□□□□□ -1.51
PCDH9-203ENST00000456367 MAP3K12Q12852 859 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 MAP3K21Q5TCX8 1036 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 TTC6Q86TZ1 520 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 OR8K1Q8NGG5 319 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 SLC26A6Q9BXS9 759 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 IQCGQ9H095 443 aaKnown RBP5.6□□□□□ -1.51
PCDH9-203ENST00000456367 RAB17Q9H0T7 212 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 ZHX3Q9H4I2 956 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 PRM3Q9NNZ6 103 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 HELLSQ9NRZ9 838 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 HOMER2Q9NSB8 354 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 BCAP29Q9UHQ4 241 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 FAM169AQ9Y6X4 670 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 ADGRL1O94910 1474 aa5.6□□□□□ -1.51
PCDH9-203ENST00000456367 LOC102724159A0A0B4J2E5 919 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 CALML3P27482 149 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 PWP2Q15269 919 aaKnown RBP5.59□□□□□ -1.51
PCDH9-203ENST00000456367 MUM1Q2TAK8 710 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 CCDC84Q86UT8 332 aaPredicted RBP5.59□□□□□ -1.51
PCDH9-203ENST00000456367 STAG1Q8WVM7 1258 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 VIPAS39Q9H9C1 493 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 ZSWIM6Q9HCJ5 1215 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 SLC27A2O14975 620 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 SEC31AO94979 1220 aaKnown RBP5.59□□□□□ -1.51
PCDH9-203ENST00000456367 CALM1P0DP23 149 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 CALM2P0DP24 149 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 CALM3P0DP25 149 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 GSPT1P15170 499 aaKnown RBP5.59□□□□□ -1.51
PCDH9-203ENST00000456367 CCDC152Q4G0S7 254 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 TSHZ3Q63HK5 1081 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms