RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 ELNP15502 786 aa5.5□□□□□ -1.53
RBM39-220ENST00000455343 AFF1P51825 1210 aaKnown RBP5.5□□□□□ -1.53
RBM39-220ENST00000455343 SAFB2Q14151 953 aaKnown RBP eCLIP5.5□□□□□ -1.53
RBM39-220ENST00000455343 CHRNA2Q15822 529 aa5.5□□□□□ -1.53
RBM39-220ENST00000455343 NKAPLQ5M9Q1 402 aa5.5□□□□□ -1.53
RBM39-220ENST00000455343 TCP11L2Q8N4U5 519 aa5.5□□□□□ -1.53
RBM39-220ENST00000455343 FAM200AQ8TCP9 573 aa5.5□□□□□ -1.53
RBM39-220ENST00000455343 SYT17Q9BSW7 474 aa5.5□□□□□ -1.53
RBM39-220ENST00000455343 PDGFDQ9GZP0 370 aaPredicted RBP5.5□□□□□ -1.53
RBM39-220ENST00000455343 C11orf16Q9NQ32 467 aa5.5□□□□□ -1.53
RBM39-220ENST00000455343 THRAP3Q9Y2W1 955 aaKnown RBP5.5□□□□□ -1.53
RBM39-220ENST00000455343 GOLGB1Q14789 3259 aaKnown RBP5.5□□□□□ -1.53
RBM39-220ENST00000455343 PPLO60437 1756 aa5.5□□□□□ -1.53
RBM39-220ENST00000455343 KNDC1Q76NI1 1749 aa5.49□□□□□ -1.53
RBM39-220ENST00000455343 ABCA3Q99758 1704 aa5.49□□□□□ -1.53
RBM39-220ENST00000455343 KIF1BO60333 1816 aa5.49□□□□□ -1.53
RBM39-220ENST00000455343 C9orf172C9J069 976 aa5.49□□□□□ -1.53
RBM39-220ENST00000455343 SELPP16109 830 aa5.49□□□□□ -1.53
RBM39-220ENST00000455343 ZC3H6P61129 1189 aaKnown RBP5.49□□□□□ -1.53
RBM39-220ENST00000455343 RAC1P63000 192 aa5.49□□□□□ -1.53
RBM39-220ENST00000455343 ADGRE1Q14246 886 aa5.49□□□□□ -1.53
RBM39-220ENST00000455343 PCSK7Q16549 785 aa5.49□□□□□ -1.53
RBM39-220ENST00000455343 C11orf91Q3C1V1 193 aa5.49□□□□□ -1.53
RBM39-220ENST00000455343 CDCA8Q53HL2 280 aa5.49□□□□□ -1.53
RBM39-220ENST00000455343 DHX32Q7L7V1 743 aaKnown RBP5.49□□□□□ -1.53
RBM39-220ENST00000455343 KRT25Q7Z3Z0 450 aa5.49□□□□□ -1.53
RBM39-220ENST00000455343 IFT43Q96FT9 208 aa5.49□□□□□ -1.53
RBM39-220ENST00000455343 LPIN3Q9BQK8 851 aa5.49□□□□□ -1.53
RBM39-220ENST00000455343 ZFATQ9P243 1243 aa5.49□□□□□ -1.53
RBM39-220ENST00000455343 USP35Q9P2H5 1018 aa5.49□□□□□ -1.53
RBM39-220ENST00000455343 LRFN2Q9ULH4 789 aa5.49□□□□□ -1.53
RBM39-220ENST00000455343 NOVA2Q9UNW9 492 aaKnown RBP5.49□□□□□ -1.53
RBM39-220ENST00000455343 SSH2Q76I76 1423 aa5.48□□□□□ -1.53
RBM39-220ENST00000455343 DLC1Q96QB1 1528 aa5.48□□□□□ -1.53
RBM39-220ENST00000455343 RREB1Q92766 1687 aa5.48□□□□□ -1.53
RBM39-220ENST00000455343 CPDO75976 1380 aa5.48□□□□□ -1.53
RBM39-220ENST00000455343 EIF3AQ14152 1382 aaKnown RBP5.48□□□□□ -1.53
RBM39-220ENST00000455343 RGS9O75916 674 aaPredicted RBP5.48□□□□□ -1.53
RBM39-220ENST00000455343 CPB1P15086 417 aa5.48□□□□□ -1.53
RBM39-220ENST00000455343 RFX1P22670 979 aa5.48□□□□□ -1.53
RBM39-220ENST00000455343 GPLD1P80108 840 aa5.48□□□□□ -1.53
RBM39-220ENST00000455343 FKBP5Q13451 457 aaPredicted RBP5.48□□□□□ -1.53
RBM39-220ENST00000455343 MBTPS1Q14703 1052 aa5.48□□□□□ -1.53
RBM39-220ENST00000455343 GRIK5Q16478 980 aa5.48□□□□□ -1.53
RBM39-220ENST00000455343 PTF1AQ7RTS3 328 aa5.48□□□□□ -1.53
RBM39-220ENST00000455343 FAM35AQ86V20 835 aa5.48□□□□□ -1.53
RBM39-220ENST00000455343 FMR1NBQ8N0W7 255 aaPredicted RBP5.48□□□□□ -1.53
RBM39-220ENST00000455343 NGDNQ8NEJ9 315 aaKnown RBP5.48□□□□□ -1.53
RBM39-220ENST00000455343 TRPM4Q8TD43 1214 aa5.48□□□□□ -1.53
RBM39-220ENST00000455343 HIRIP3Q9BW71 556 aaPredicted RBP5.48□□□□□ -1.53
RBM39-220ENST00000455343 FRRS1LQ9P0K9 344 aa5.48□□□□□ -1.53
RBM39-220ENST00000455343 POGKQ9P215 609 aa5.48□□□□□ -1.53
RBM39-220ENST00000455343 TRPM3Q9HCF6 1732 aaPredicted RBP5.48□□□□□ -1.53
RBM39-220ENST00000455343 BCL9O00512 1426 aa5.48□□□□□ -1.53
RBM39-220ENST00000455343 ALS2Q96Q42 1657 aa5.47□□□□□ -1.53
RBM39-220ENST00000455343 ZBTB42B2RXF5 422 aa5.47□□□□□ -1.53
RBM39-220ENST00000455343 OPLAHO14841 1288 aa5.47□□□□□ -1.53
RBM39-220ENST00000455343 DYRK3O43781 588 aa5.47□□□□□ -1.53
RBM39-220ENST00000455343 ZBTB7AO95365 584 aa5.47□□□□□ -1.53
RBM39-220ENST00000455343 RARAP10276 462 aa5.47□□□□□ -1.53
RBM39-220ENST00000455343 TARSP26639 723 aaKnown RBP5.47□□□□□ -1.53
RBM39-220ENST00000455343 EVA1CP58658 441 aa5.47□□□□□ -1.53
RBM39-220ENST00000455343 SWI5Q1ZZU3 235 aa5.47□□□□□ -1.53
RBM39-220ENST00000455343 PERM1Q5SV97 790 aa5.47□□□□□ -1.53
RBM39-220ENST00000455343 TXNRD3Q86VQ6 643 aa5.47□□□□□ -1.53
RBM39-220ENST00000455343 DMRTC2Q8IXT2 367 aaPredicted RBP5.47□□□□□ -1.53
RBM39-220ENST00000455343 LENG1Q96BZ8 264 aaPredicted RBP5.47□□□□□ -1.53
RBM39-220ENST00000455343 MPHOSPH9Q99550 1183 aa5.47□□□□□ -1.53
RBM39-220ENST00000455343 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.47□□□□□ -1.532e-6■■■□□ 15.1
RBM39-220ENST00000455343 ZMIZ1Q9ULJ6 1067 aa5.47□□□□□ -1.53
RBM39-220ENST00000455343 TRAK1Q9UPV9 953 aa5.47□□□□□ -1.53
RBM39-220ENST00000455343 RTCBQ9Y3I0 505 aaKnown RBP5.47□□□□□ -1.53
RBM39-220ENST00000455343 NUP188Q5SRE5 1749 aa5.47□□□□□ -1.53
RBM39-220ENST00000455343 USP19O94966 1318 aa5.47□□□□□ -1.53
RBM39-220ENST00000455343 CAMTA1Q9Y6Y1 1673 aa5.47□□□□□ -1.53
RBM39-220ENST00000455343 ADGRB1O14514 1584 aa5.46□□□□□ -1.53
RBM39-220ENST00000455343 POLR3AO14802 1390 aaPredicted RBP5.46□□□□□ -1.54
RBM39-220ENST00000455343 MAP3K5Q99683 1374 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 SASH3O75995 380 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 EGFRP00533 1210 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 NRLP54845 237 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 MLLT1Q03111 559 aaPredicted RBP5.46□□□□□ -1.54
RBM39-220ENST00000455343 PLAURQ03405 335 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 ELOAQ14241 798 aaKnown RBP5.46□□□□□ -1.54
RBM39-220ENST00000455343 SLC15A2Q16348 729 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 TXNRD1Q16881 649 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 ZMYM1Q5SVZ6 1142 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 MSL1Q68DK7 614 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 SHISA2Q6UWI4 295 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 TREML1Q86YW5 311 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 TTC9Q92623 222 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 NUDT16Q96DE0 195 aaKnown RBP5.46□□□□□ -1.54
RBM39-220ENST00000455343 PRIMPOLQ96LW4 560 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 MTFR1LQ9H019 292 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 USP20Q9Y2K6 914 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 TULP4Q9NRJ4 1543 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 OVOS2A0A0G2JMS6 1433 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 OVOS2A0A0J9YW53 1432 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 OVOS2Q6IE36 1432 aa5.46□□□□□ -1.54
RBM39-220ENST00000455343 ATP7BP35670 1465 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms