RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 CELF2O95319 508 aaKnown RBP34.03■■■■□ 3.04
SMARCC1-203ENST00000454240 MX1P20591 662 aa34.03■■■■□ 3.04
SMARCC1-203ENST00000454240 FKBP1CQ5VVH2 108 aa34.03■■■■□ 3.04
SMARCC1-203ENST00000454240 PPP2R3BQ9Y5P8 575 aa34.03■■■■□ 3.04
SMARCC1-203ENST00000454240 MAP3K12Q12852 859 aa34.02■■■■□ 3.04
SMARCC1-203ENST00000454240 TNFAIP1Q13829 316 aa34.02■■■■□ 3.04
SMARCC1-203ENST00000454240 USP40Q9NVE5 1235 aa34.02■■■■□ 3.04
SMARCC1-203ENST00000454240 BTDP43251 543 aa34.01■■■■□ 3.03
SMARCC1-203ENST00000454240 CACNB3P54284 484 aa34.01■■■■□ 3.03
SMARCC1-203ENST00000454240 RASA3Q14644 834 aa34.01■■■■□ 3.03
SMARCC1-203ENST00000454240 PRAMEF18Q5VWM3 479 aa34.01■■■■□ 3.03
SMARCC1-203ENST00000454240 TMED8Q6PL24 325 aaPredicted RBP34.01■■■■□ 3.03
SMARCC1-203ENST00000454240 PI4K2BQ8TCG2 481 aa34.01■■■■□ 3.03
SMARCC1-203ENST00000454240 ZNF408Q9H9D4 720 aa34.01■■■■□ 3.03
SMARCC1-203ENST00000454240 TMOD2Q9NZR1 351 aa34.01■■■■□ 3.03
SMARCC1-203ENST00000454240 STAP2Q9UGK3 403 aa34.01■■■■□ 3.03
SMARCC1-203ENST00000454240 TCP10L2B9ZVM9 353 aa34■■■■□ 3.03
SMARCC1-203ENST00000454240 MYH7P12883 1935 aa34■■■■□ 3.03
SMARCC1-203ENST00000454240 ERC2O15083 957 aa33.99■■■■□ 3.03
SMARCC1-203ENST00000454240 HTRA3P83110 453 aa33.99■■■■□ 3.03
SMARCC1-203ENST00000454240 CNTNAP1P78357 1384 aa33.98■■■■□ 3.03
SMARCC1-203ENST00000454240 GLRX3O76003 335 aaKnown RBP33.98■■■■□ 3.03
SMARCC1-203ENST00000454240 NEFLP07196 543 aa33.98■■■■□ 3.03
SMARCC1-203ENST00000454240 TNNI2P48788 182 aa33.98■■■■□ 3.03
SMARCC1-203ENST00000454240 ADGRA1Q86SQ6 560 aa33.98■■■■□ 3.03
SMARCC1-203ENST00000454240 FAM83AQ86UY5 434 aa33.98■■■■□ 3.03
SMARCC1-203ENST00000454240 MAGEB6Q8N7X4 407 aa33.98■■■■□ 3.03
SMARCC1-203ENST00000454240 PDE1AP54750 535 aa33.97■■■■□ 3.03
SMARCC1-203ENST00000454240 RHBDL3P58872 404 aa33.97■■■■□ 3.03
SMARCC1-203ENST00000454240 CYP7A1P22680 504 aa33.96■■■■□ 3.03
SMARCC1-203ENST00000454240 PPP4CP60510 307 aa33.96■■■■□ 3.03
SMARCC1-203ENST00000454240 MAP4K4O95819 1239 aaPredicted RBP33.95■■■■□ 3.03
SMARCC1-203ENST00000454240 TEPSINQ96N21 525 aa33.95■■■■□ 3.03
SMARCC1-203ENST00000454240 IDI2Q9BXS1 227 aa33.95■■■■□ 3.03
SMARCC1-203ENST00000454240 PDE6AP16499 860 aa33.94■■■■□ 3.02
SMARCC1-203ENST00000454240 NFIAQ12857 509 aa33.94■■■■□ 3.02
SMARCC1-203ENST00000454240 SLC9C2Q5TAH2 1124 aa33.94■■■■□ 3.02
SMARCC1-203ENST00000454240 TMEM39BQ9GZU3 492 aa33.94■■■■□ 3.02
SMARCC1-203ENST00000454240 GBA2Q9HCG7 927 aaPredicted RBP33.94■■■■□ 3.02
SMARCC1-203ENST00000454240 FAM198AQ9UFP1 575 aa33.94■■■■□ 3.02
SMARCC1-203ENST00000454240 RFX7Q2KHR2 1363 aa33.94■■■■□ 3.02
SMARCC1-203ENST00000454240 CDK5RAP2Q96SN8 1893 aa33.93■■■■□ 3.02
SMARCC1-203ENST00000454240 WDHD1O75717 1129 aaPredicted RBP33.93■■■■□ 3.02
SMARCC1-203ENST00000454240 BAG3O95817 575 aa33.93■■■■□ 3.02
SMARCC1-203ENST00000454240 NOL10Q9BSC4 688 aaKnown RBP33.93■■■■□ 3.02
SMARCC1-203ENST00000454240 AATFQ9NY61 560 aaKnown RBP eCLIP33.93■■■■□ 3.02
SMARCC1-203ENST00000454240 TLL2Q9Y6L7 1015 aa33.93■■■■□ 3.02
SMARCC1-203ENST00000454240 NBPF12Q5TAG4 269 aaPredicted RBP33.92■■■■□ 3.02
SMARCC1-203ENST00000454240 SAPCD2Q86UD0 394 aa33.92■■■■□ 3.02
SMARCC1-203ENST00000454240 C2orf69Q8N8R5 385 aa33.92■■■■□ 3.02
SMARCC1-203ENST00000454240 FAM151AQ8WW52 585 aa33.92■■■■□ 3.02
SMARCC1-203ENST00000454240 PAPPA2Q9BXP8 1791 aa33.92■■■■□ 3.02
SMARCC1-203ENST00000454240 TCRBV5S4A2TA0A5A2 114 aa33.91■■■■□ 3.02
SMARCC1-203ENST00000454240 NF2P35240 595 aa33.91■■■■□ 3.02
SMARCC1-203ENST00000454240 SUPT20HL1Q3ZLR7 823 aa33.91■■■■□ 3.02
SMARCC1-203ENST00000454240 PLEKHM2Q8IWE5 1019 aa33.91■■■■□ 3.02
SMARCC1-203ENST00000454240 KBTBD3Q8NAB2 608 aa33.91■■■■□ 3.02
SMARCC1-203ENST00000454240 DDX24Q9GZR7 859 aaKnown RBP eCLIP33.91■■■■□ 3.023e-7■■□□□ 13
SMARCC1-203ENST00000454240 ABT1Q9ULW3 272 aaKnown RBP33.91■■■■□ 3.02
SMARCC1-203ENST00000454240 AK9Q5TCS8 1911 aa33.91■■■■□ 3.02
SMARCC1-203ENST00000454240 FOCADQ5VW36 1801 aa33.9■■■■□ 3.02
SMARCC1-203ENST00000454240 SSC5DA1L4H1 1573 aa33.9■■■■□ 3.02
SMARCC1-203ENST00000454240 ZNF532Q9HCE3 1301 aa33.9■■■■□ 3.02
SMARCC1-203ENST00000454240 ADD2P35612 726 aa33.9■■■■□ 3.02
SMARCC1-203ENST00000454240 FKBP1BP68106 108 aa33.9■■■■□ 3.02
SMARCC1-203ENST00000454240 SH3RF3Q8TEJ3 882 aaPredicted RBP33.9■■■■□ 3.02
SMARCC1-203ENST00000454240 OSBPL3Q9H4L5 887 aa33.9■■■■□ 3.02
SMARCC1-203ENST00000454240 RPAP1Q9BWH6 1393 aaPredicted RBP33.89■■■■□ 3.02
SMARCC1-203ENST00000454240 NPM3O75607 178 aaKnown RBP33.89■■■■□ 3.02
SMARCC1-203ENST00000454240 PLCG2P16885 1265 aa33.89■■■■□ 3.02
SMARCC1-203ENST00000454240 RGS3P49796 1198 aa33.89■■■■□ 3.02
SMARCC1-203ENST00000454240 TCP10Q12799 353 aa33.89■■■■□ 3.02
SMARCC1-203ENST00000454240 CDAN1Q8IWY9 1227 aa33.89■■■■□ 3.02
SMARCC1-203ENST00000454240 CEP350Q5VT06 3117 aa33.88■■■■□ 3.01
SMARCC1-203ENST00000454240 ENTPD3O75355 529 aa33.88■■■■□ 3.01
SMARCC1-203ENST00000454240 DNAJC5GQ8N7S2 189 aa33.88■■■■□ 3.01
SMARCC1-203ENST00000454240 DDX4Q9NQI0 724 aaKnown RBP33.88■■■■□ 3.01
SMARCC1-203ENST00000454240 RASSF10A6NK89 507 aa33.87■■■■□ 3.01
SMARCC1-203ENST00000454240 DYNLL1P63167 89 aaKnown RBP33.87■■■■□ 3.01
SMARCC1-203ENST00000454240 ZSCAN25Q6NSZ9 544 aa33.87■■■■□ 3.01
SMARCC1-203ENST00000454240 CERS3Q8IU89 383 aa33.87■■■■□ 3.01
SMARCC1-203ENST00000454240 ZFPM1Q8IX07 1006 aa33.87■■■■□ 3.01
SMARCC1-203ENST00000454240 TEX11Q8IYF3 940 aa33.87■■■■□ 3.01
SMARCC1-203ENST00000454240 MIGA1Q8NAN2 632 aa33.87■■■■□ 3.01
SMARCC1-203ENST00000454240 PDE4AP27815 886 aa33.86■■■■□ 3.01
SMARCC1-203ENST00000454240 UBE3CQ15386 1083 aa33.86■■■■□ 3.01
SMARCC1-203ENST00000454240 DEFB115Q30KQ5 88 aa33.85■■■■□ 3.01
SMARCC1-203ENST00000454240 SLFNL1Q499Z3 407 aa33.85■■■■□ 3.01
SMARCC1-203ENST00000454240 MOB2Q70IA6 237 aa33.85■■■■□ 3.01
SMARCC1-203ENST00000454240 HHIPL1Q96JK4 782 aa33.85■■■■□ 3.01
SMARCC1-203ENST00000454240 RIOK1Q9BRS2 568 aaKnown RBP33.85■■■■□ 3.01
SMARCC1-203ENST00000454240 CHGBP05060 677 aa33.84■■■■□ 3.01
SMARCC1-203ENST00000454240 HUNKP57058 714 aa33.84■■■■□ 3.01
SMARCC1-203ENST00000454240 PICALMQ13492 652 aa33.84■■■■□ 3.01
SMARCC1-203ENST00000454240 CENPQQ7L2Z9 268 aaPredicted RBP33.84■■■■□ 3.01
SMARCC1-203ENST00000454240 MAGEB6P1A0A0J9YX57 407 aa33.82■■■■□ 3
SMARCC1-203ENST00000454240 PPP1R12BO60237 982 aaPredicted RBP33.82■■■■□ 3
SMARCC1-203ENST00000454240 PRKG1Q13976 671 aa33.82■■■■□ 3
SMARCC1-203ENST00000454240 MAP3K11Q16584 847 aa33.82■■■■□ 3
SMARCC1-203ENST00000454240 ERICH6BQ5W0A0 696 aa33.82■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms