RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 CAPNS2Q96L46 248 aa11.19□□□□□ -0.62
RFX3-207ENST00000449190 LNPKQ9C0E8 428 aa11.19□□□□□ -0.62
RFX3-207ENST00000449190 DBNLQ9UJU6 430 aaKnown RBP11.19□□□□□ -0.62
RFX3-207ENST00000449190 ERC2O15083 957 aa11.18□□□□□ -0.62
RFX3-207ENST00000449190 MAP2K2P36507 400 aa11.18□□□□□ -0.62
RFX3-207ENST00000449190 RBM5P52756 815 aaKnown RBP eCLIP11.18□□□□□ -0.62
RFX3-207ENST00000449190 ATN1P54259 1190 aaPredicted RBP11.18□□□□□ -0.62
RFX3-207ENST00000449190 HUNKP57058 714 aa11.18□□□□□ -0.62
RFX3-207ENST00000449190 CYP4F22Q6NT55 531 aa11.18□□□□□ -0.62
RFX3-207ENST00000449190 PAXIP1Q6ZW49 1069 aaPredicted RBP11.18□□□□□ -0.62
RFX3-207ENST00000449190 ZGPATQ8N5A5 531 aaKnown RBP11.18□□□□□ -0.62
RFX3-207ENST00000449190 ZNF512BQ96KM6 892 aaPredicted RBP11.18□□□□□ -0.62
RFX3-207ENST00000449190 ECHDC1Q9NTX5 307 aa11.18□□□□□ -0.62
RFX3-207ENST00000449190 TLR7Q9NYK1 1049 aaKnown RBP11.18□□□□□ -0.62
RFX3-207ENST00000449190 HSPA1AP0DMV8 641 aaKnown RBP11.17□□□□□ -0.62
RFX3-207ENST00000449190 HSPA1BP0DMV9 641 aaKnown RBP11.17□□□□□ -0.62
RFX3-207ENST00000449190 ARID4AP29374 1257 aaPredicted RBP11.17□□□□□ -0.62
RFX3-207ENST00000449190 NF2P35240 595 aa11.17□□□□□ -0.62
RFX3-207ENST00000449190 CRKP46108 304 aa11.17□□□□□ -0.62
RFX3-207ENST00000449190 MAP2K1Q02750 393 aaPredicted RBP11.17□□□□□ -0.62
RFX3-207ENST00000449190 SPTY2D1Q68D10 685 aaPredicted RBP11.17□□□□□ -0.62
RFX3-207ENST00000449190 RGMBQ6NW40 437 aa11.17□□□□□ -0.62
RFX3-207ENST00000449190 SPATA5Q8NB90 893 aa11.17□□□□□ -0.62
RFX3-207ENST00000449190 CCDC102AQ96A19 550 aa11.17□□□□□ -0.62
RFX3-207ENST00000449190 DEFB129Q9H1M3 183 aa11.17□□□□□ -0.62
RFX3-207ENST00000449190 WBP1LQ9NX94 342 aa11.17□□□□□ -0.62
RFX3-207ENST00000449190 PCDHAC2Q9Y5I4 1007 aa11.17□□□□□ -0.62
RFX3-207ENST00000449190 PPP2R3BQ9Y5P8 575 aa11.17□□□□□ -0.62
RFX3-207ENST00000449190 MAST3O60307 1309 aa11.16□□□□□ -0.62
RFX3-207ENST00000449190 TTC41PQ6P2S7 1318 aa11.16□□□□□ -0.62
RFX3-207ENST00000449190 POLR2AP24928 1970 aaKnown RBP11.16□□□□□ -0.62
RFX3-207ENST00000449190 ATP5JP18859 108 aa11.16□□□□□ -0.62
RFX3-207ENST00000449190 MX1P20591 662 aa11.16□□□□□ -0.62
RFX3-207ENST00000449190 RASGRF1Q13972 1273 aa11.16□□□□□ -0.62
RFX3-207ENST00000449190 GRIK5Q16478 980 aa11.16□□□□□ -0.62
RFX3-207ENST00000449190 PRAMEF18Q5VWM3 479 aa11.16□□□□□ -0.62
RFX3-207ENST00000449190 HHIPL2Q6UWX4 724 aa11.16□□□□□ -0.62
RFX3-207ENST00000449190 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.16□□□□□ -0.62
RFX3-207ENST00000449190 TEKT1Q969V4 418 aa11.16□□□□□ -0.62
RFX3-207ENST00000449190 SNRKQ9NRH2 765 aa11.16□□□□□ -0.62
RFX3-207ENST00000449190 HMG20BQ9P0W2 317 aa11.16□□□□□ -0.62
RFX3-207ENST00000449190 ZNF70Q9UC06 446 aaPredicted RBP11.16□□□□□ -0.62
RFX3-207ENST00000449190 SCAF8Q9UPN6 1271 aaKnown RBP11.16□□□□□ -0.62
RFX3-207ENST00000449190 PDS5AQ29RF7 1337 aaKnown RBP11.15□□□□□ -0.62
RFX3-207ENST00000449190 SALL1Q9NSC2 1324 aa11.15□□□□□ -0.62
RFX3-207ENST00000449190 TRPM7Q96QT4 1865 aa11.15□□□□□ -0.62
RFX3-207ENST00000449190 GLRX3O76003 335 aaKnown RBP11.15□□□□□ -0.62
RFX3-207ENST00000449190 TNFAIP1Q13829 316 aa11.15□□□□□ -0.62
RFX3-207ENST00000449190 TTF1Q15361 905 aaPredicted RBP11.15□□□□□ -0.62
RFX3-207ENST00000449190 SUPT20HL1Q3ZLR7 823 aa11.15□□□□□ -0.62
RFX3-207ENST00000449190 ZDHHC15Q96MV8 337 aa11.15□□□□□ -0.62
RFX3-207ENST00000449190 DNAJC2Q99543 621 aaKnown RBP11.15□□□□□ -0.62
RFX3-207ENST00000449190 BOLA2Q9H3K6 86 aa11.15□□□□□ -0.62
RFX3-207ENST00000449190 TDRD3Q9H7E2 651 aaKnown RBP11.15□□□□□ -0.62
RFX3-207ENST00000449190 ABCF2Q9UG63 623 aa11.15□□□□□ -0.62
RFX3-207ENST00000449190 A0A1B0GUL6 1792 aa11.15□□□□□ -0.62
RFX3-207ENST00000449190 CLRN2A0PK11 232 aa11.14□□□□□ -0.63
RFX3-207ENST00000449190 POTEFA5A3E0 1075 aa11.14□□□□□ -0.63
RFX3-207ENST00000449190 LDHBP07195 334 aaKnown RBP11.14□□□□□ -0.63
RFX3-207ENST00000449190 MCAMP43121 646 aa11.14□□□□□ -0.63
RFX3-207ENST00000449190 ZAP70P43403 619 aa11.14□□□□□ -0.63
RFX3-207ENST00000449190 ZNF157P51786 506 aaPredicted RBP11.14□□□□□ -0.63
RFX3-207ENST00000449190 PDE1AP54750 535 aa11.14□□□□□ -0.63
RFX3-207ENST00000449190 NOGQ13253 232 aa11.14□□□□□ -0.63
RFX3-207ENST00000449190 GRM1Q13255 1194 aa11.14□□□□□ -0.63
RFX3-207ENST00000449190 ERICH6Q7L0X2 663 aa11.14□□□□□ -0.63
RFX3-207ENST00000449190 ARMC9Q7Z3E5 817 aa11.14□□□□□ -0.63
RFX3-207ENST00000449190 SLF2Q8IX21 1173 aa11.14□□□□□ -0.63
RFX3-207ENST00000449190 AIDAQ96BJ3 306 aa11.14□□□□□ -0.63
RFX3-207ENST00000449190 VEZTQ9HBM0 779 aa11.14□□□□□ -0.63
RFX3-207ENST00000449190 LRP2BPQ9P2M1 347 aa11.14□□□□□ -0.63
RFX3-207ENST00000449190 STAP2Q9UGK3 403 aa11.14□□□□□ -0.63
RFX3-207ENST00000449190 UNCXA6NJT0 531 aa11.13□□□□□ -0.63
RFX3-207ENST00000449190 FAM155AB1AL88 458 aaPredicted RBP11.13□□□□□ -0.63
RFX3-207ENST00000449190 UBE2Q2LH0YL09 131 aa11.13□□□□□ -0.63
RFX3-207ENST00000449190 IGSF3O75054 1194 aa11.13□□□□□ -0.63
RFX3-207ENST00000449190 AOC2O75106 756 aa11.13□□□□□ -0.63
RFX3-207ENST00000449190 TNNI2P48788 182 aa11.13□□□□□ -0.63
RFX3-207ENST00000449190 GSTO1P78417 241 aa11.13□□□□□ -0.63
RFX3-207ENST00000449190 TTLL12Q14166 644 aaPredicted RBP11.13□□□□□ -0.63
RFX3-207ENST00000449190 RASA3Q14644 834 aa11.13□□□□□ -0.63
RFX3-207ENST00000449190 MAP3K11Q16584 847 aa11.13□□□□□ -0.63
RFX3-207ENST00000449190 LRRFIP1Q32MZ4 808 aaKnown RBP11.13□□□□□ -0.63
RFX3-207ENST00000449190 APOBEC3HQ6NTF7 200 aaKnown RBP11.13□□□□□ -0.63
RFX3-207ENST00000449190 OTUD7AQ8TE49 926 aaPredicted RBP11.13□□□□□ -0.63
RFX3-207ENST00000449190 HAUS7Q99871 368 aa11.13□□□□□ -0.63
RFX3-207ENST00000449190 BEGAINQ9BUH8 593 aa11.13□□□□□ -0.63
RFX3-207ENST00000449190 RAI14Q9P0K7 980 aa11.13□□□□□ -0.63
RFX3-207ENST00000449190 GTF3C3Q9Y5Q9 886 aa11.13□□□□□ -0.63
RFX3-207ENST00000449190 ZNF646O15015 1829 aaPredicted RBP11.13□□□□□ -0.63
RFX3-207ENST00000449190 AOX1Q06278 1338 aa11.12□□□□□ -0.63
RFX3-207ENST00000449190 GOLIM4O00461 696 aa11.12□□□□□ -0.63
RFX3-207ENST00000449190 PPP1R12BO60237 982 aaPredicted RBP11.12□□□□□ -0.63
RFX3-207ENST00000449190 LDHCP07864 332 aa11.12□□□□□ -0.63
RFX3-207ENST00000449190 PRDX5P30044 214 aa11.12□□□□□ -0.63
RFX3-207ENST00000449190 CTCFP49711 727 aaPredicted RBP11.12□□□□□ -0.63
RFX3-207ENST00000449190 MAP3K12Q12852 859 aa11.12□□□□□ -0.63
RFX3-207ENST00000449190 LDLRAD1Q5T700 205 aa11.12□□□□□ -0.63
RFX3-207ENST00000449190 FKBP1CQ5VVH2 108 aa11.12□□□□□ -0.63
RFX3-207ENST00000449190 TSHZ3Q63HK5 1081 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms