RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 KBTBD3Q8NAB2 608 aa15.99■□□□□ 0.15
VPS52-212ENST00000445902 RGS22Q8NE09 1264 aa15.99■□□□□ 0.15
VPS52-212ENST00000445902 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
VPS52-212ENST00000445902 KIF23Q02241 960 aaPredicted RBP15.99■□□□□ 0.15
VPS52-212ENST00000445902 SPECC1LQ69YQ0 1117 aa15.99■□□□□ 0.15
VPS52-212ENST00000445902 VSNL1P62760 191 aa15.99■□□□□ 0.15
VPS52-212ENST00000445902 TBX2Q13207 712 aaPredicted RBP15.99■□□□□ 0.15
VPS52-212ENST00000445902 CNNM3Q8NE01 707 aa15.99■□□□□ 0.15
VPS52-212ENST00000445902 NFE2L3Q9Y4A8 694 aa15.99■□□□□ 0.15
VPS52-212ENST00000445902 DDX58O95786 925 aaKnown RBP15.98■□□□□ 0.15
VPS52-212ENST00000445902 RXRAP19793 462 aa15.98■□□□□ 0.15
VPS52-212ENST00000445902 MAGEA9P43362 315 aa15.98■□□□□ 0.15
VPS52-212ENST00000445902 PTPN12Q05209 780 aaKnown RBP15.98■□□□□ 0.15
VPS52-212ENST00000445902 FMR1Q06787 632 aaKnown RBP eCLIP15.98■□□□□ 0.15
VPS52-212ENST00000445902 KIF4BQ2VIQ3 1234 aa15.98■□□□□ 0.15
VPS52-212ENST00000445902 ZNF569Q5MCW4 686 aa15.98■□□□□ 0.15
VPS52-212ENST00000445902 C19orf44Q9H6X5 657 aa15.98■□□□□ 0.15
VPS52-212ENST00000445902 EIF3JO75822 258 aaKnown RBP15.98■□□□□ 0.15
VPS52-212ENST00000445902 SLC39A14Q15043 492 aa15.98■□□□□ 0.15
VPS52-212ENST00000445902 E2F4Q16254 413 aa15.98■□□□□ 0.15
VPS52-212ENST00000445902 HSP90AB3PQ58FF7 597 aa15.98■□□□□ 0.15
VPS52-212ENST00000445902 LRRC31Q6UY01 552 aa15.98■□□□□ 0.15
VPS52-212ENST00000445902 BRAPQ7Z569 592 aa15.98■□□□□ 0.15
VPS52-212ENST00000445902 NEURL1BA8MQ27 555 aa15.97■□□□□ 0.15
VPS52-212ENST00000445902 CCDC175P0C221 793 aa15.97■□□□□ 0.15
VPS52-212ENST00000445902 HSP90B2PQ58FF3 399 aa15.97■□□□□ 0.15
VPS52-212ENST00000445902 UBE3BQ7Z3V4 1068 aa15.97■□□□□ 0.15
VPS52-212ENST00000445902 L1RE1Q9UN81 338 aa15.97■□□□□ 0.15
VPS52-212ENST00000445902 UTYO14607 1347 aa15.97■□□□□ 0.15
VPS52-212ENST00000445902 SH3TC1Q8TE82 1336 aa15.97■□□□□ 0.15
VPS52-212ENST00000445902 GCKRQ14397 625 aa15.97■□□□□ 0.15
VPS52-212ENST00000445902 CASP8Q14790 479 aa15.97■□□□□ 0.15
VPS52-212ENST00000445902 FAM204AQ9H8W3 233 aa15.97■□□□□ 0.15
VPS52-212ENST00000445902 SAMSN1Q9NSI8 373 aaKnown RBP15.97■□□□□ 0.15
VPS52-212ENST00000445902 PAG1Q9NWQ8 432 aa15.97■□□□□ 0.15
VPS52-212ENST00000445902 PTPRUQ92729 1446 aa15.97■□□□□ 0.15
VPS52-212ENST00000445902 MYH8P13535 1937 aa15.97■□□□□ 0.15
VPS52-212ENST00000445902 ABL1P00519 1130 aa15.96■□□□□ 0.15
VPS52-212ENST00000445902 TIMM10P62072 90 aa15.96■□□□□ 0.15
VPS52-212ENST00000445902 NEXNQ0ZGT2 675 aa15.96■□□□□ 0.15
VPS52-212ENST00000445902 CTR9Q6PD62 1173 aa15.96■□□□□ 0.15
VPS52-212ENST00000445902 RAD9BQ6WBX8 426 aa15.96■□□□□ 0.15
VPS52-212ENST00000445902 GPATCH11Q8N954 259 aa15.96■□□□□ 0.15
VPS52-212ENST00000445902 MAST3O60307 1309 aa15.96■□□□□ 0.15
VPS52-212ENST00000445902 ERLIN1O75477 346 aa15.96■□□□□ 0.15
VPS52-212ENST00000445902 GRAMD1CQ8IYS0 662 aa15.96■□□□□ 0.15
VPS52-212ENST00000445902 CDC5LQ99459 802 aaKnown RBP15.96■□□□□ 0.15
VPS52-212ENST00000445902 DSCC1Q9BVC3 393 aa15.96■□□□□ 0.15
VPS52-212ENST00000445902 TEX13AQ9BXU3 409 aaPredicted RBP15.96■□□□□ 0.15
VPS52-212ENST00000445902 CDC23Q9UJX2 597 aa15.96■□□□□ 0.15
VPS52-212ENST00000445902 HPS5Q9UPZ3 1129 aa15.96■□□□□ 0.15
VPS52-212ENST00000445902 RGPD2P0DJD1 1756 aa15.96■□□□□ 0.15
VPS52-212ENST00000445902 LRRIQ3A6PVS8 624 aaPredicted RBP15.96■□□□□ 0.14
VPS52-212ENST00000445902 M0R2C6 588 aa15.96■□□□□ 0.14
VPS52-212ENST00000445902 PRC1O43663 620 aa15.96■□□□□ 0.14
VPS52-212ENST00000445902 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.96■□□□□ 0.14
VPS52-212ENST00000445902 PALLDQ8WX93 1383 aa15.95■□□□□ 0.14
VPS52-212ENST00000445902 SLC39A6Q13433 755 aa15.95■□□□□ 0.14
VPS52-212ENST00000445902 VPS37DQ86XT2 251 aa15.95■□□□□ 0.14
VPS52-212ENST00000445902 HPSEQ9Y251 543 aa15.95■□□□□ 0.14
VPS52-212ENST00000445902 MED1Q15648 1581 aaPredicted RBP15.95■□□□□ 0.14
VPS52-212ENST00000445902 ATP5J2-PTCD1G3V325 749 aa15.95■□□□□ 0.14
VPS52-212ENST00000445902 RNMTO43148 476 aaKnown RBP15.95■□□□□ 0.14
VPS52-212ENST00000445902 TEX33O43247 280 aa15.95■□□□□ 0.14
VPS52-212ENST00000445902 KIF5CO60282 957 aa15.95■□□□□ 0.14
VPS52-212ENST00000445902 PTCD1O75127 700 aaKnown RBP15.95■□□□□ 0.14
VPS52-212ENST00000445902 PRR29P0C7W0 189 aa15.95■□□□□ 0.14
VPS52-212ENST00000445902 RFX5P48382 616 aaPredicted RBP15.95■□□□□ 0.14
VPS52-212ENST00000445902 HDGFP51858 240 aaKnown RBP15.95■□□□□ 0.14
VPS52-212ENST00000445902 XAGE3Q8WTP9 111 aa15.95■□□□□ 0.14
VPS52-212ENST00000445902 GDAP1L1Q96MZ0 367 aa15.95■□□□□ 0.14
VPS52-212ENST00000445902 COPRSQ9NQ92 184 aa15.95■□□□□ 0.14
VPS52-212ENST00000445902 RAI14Q9P0K7 980 aa15.95■□□□□ 0.14
VPS52-212ENST00000445902 CCDC102BQ68D86 513 aa15.94■□□□□ 0.14
VPS52-212ENST00000445902 OSCARQ8IYS5 282 aa15.94■□□□□ 0.14
VPS52-212ENST00000445902 SLC35F6Q8N357 371 aa15.94■□□□□ 0.14
VPS52-212ENST00000445902 HNRNPLLQ8WVV9 542 aaKnown RBP15.94■□□□□ 0.14
VPS52-212ENST00000445902 KCNH3Q9ULD8 1083 aa15.94■□□□□ 0.14
VPS52-212ENST00000445902 AKAP4Q5JQC9 854 aa15.94■□□□□ 0.14
VPS52-212ENST00000445902 C1orf141Q5JVX7 400 aa15.94■□□□□ 0.14
VPS52-212ENST00000445902 AEBP2Q6ZN18 517 aaPredicted RBP15.94■□□□□ 0.14
VPS52-212ENST00000445902 COPS6Q7L5N1 327 aa15.94■□□□□ 0.14
VPS52-212ENST00000445902 CEP112Q8N8E3 955 aa15.94■□□□□ 0.14
VPS52-212ENST00000445902 NOA1Q8NC60 698 aaKnown RBP15.94■□□□□ 0.14
VPS52-212ENST00000445902 PHKBQ93100 1093 aa15.94■□□□□ 0.14
VPS52-212ENST00000445902 DDX21Q9NR30 783 aaKnown RBP eCLIP15.94■□□□□ 0.14
VPS52-212ENST00000445902 ADGRG1Q9Y653 693 aa15.94■□□□□ 0.14
VPS52-212ENST00000445902 ADAMTS13Q76LX8 1427 aa15.94■□□□□ 0.14
VPS52-212ENST00000445902 PDIA6Q15084 440 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 ZMYM1Q5SVZ6 1142 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 RABEP2Q9H5N1 569 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 HELLSQ9NRZ9 838 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 RAB21Q9UL25 225 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 UBE2Q2LH0YL09 131 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 GUCY2CP25092 1073 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 LTKP29376 864 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 USP5P45974 858 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 CORO7P57737 925 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 MSANTD4Q8NCY6 345 aa15.93■□□□□ 0.14
VPS52-212ENST00000445902 ACRBPQ8NEB7 543 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms