RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 SNRKQ9NRH2 765 aa23.07■■□□□ 1.28
HDAC4-203ENST00000445704 TMOD2Q9NZR1 351 aa23.07■■□□□ 1.28
HDAC4-203ENST00000445704 APBB1O00213 710 aa23.06■■□□□ 1.28
HDAC4-203ENST00000445704 MECOMQ03112 1051 aa23.06■■□□□ 1.28
HDAC4-203ENST00000445704 HSP90AB4PQ58FF6 505 aa23.06■■□□□ 1.28
HDAC4-203ENST00000445704 COL13A1Q5TAT6 717 aaPredicted RBP23.06■■□□□ 1.28
HDAC4-203ENST00000445704 FKBP1CQ5VVH2 108 aa23.06■■□□□ 1.28
HDAC4-203ENST00000445704 SPTY2D1Q68D10 685 aaPredicted RBP23.06■■□□□ 1.28
HDAC4-203ENST00000445704 ERICH6Q7L0X2 663 aa23.06■■□□□ 1.28
HDAC4-203ENST00000445704 USP2O75604 605 aaPredicted RBP23.05■■□□□ 1.28
HDAC4-203ENST00000445704 HSPA8P11142 646 aaKnown RBP23.05■■□□□ 1.28
HDAC4-203ENST00000445704 FAM83AQ86UY5 434 aa23.05■■□□□ 1.28
HDAC4-203ENST00000445704 AACSQ86V21 672 aa23.05■■□□□ 1.28
HDAC4-203ENST00000445704 ZNF512BQ96KM6 892 aaPredicted RBP23.05■■□□□ 1.28
HDAC4-203ENST00000445704 OTOFQ9HC10 1997 aa23.05■■□□□ 1.28
HDAC4-203ENST00000445704 PPP1R12BO60237 982 aaPredicted RBP23.04■■□□□ 1.28
HDAC4-203ENST00000445704 CTCFP49711 727 aaPredicted RBP23.04■■□□□ 1.28
HDAC4-203ENST00000445704 NFIAQ12857 509 aa23.04■■□□□ 1.28
HDAC4-203ENST00000445704 FAM163AQ96GL9 167 aaPredicted RBP23.04■■□□□ 1.28
HDAC4-203ENST00000445704 CLMNQ96JQ2 1002 aa23.04■■□□□ 1.28
HDAC4-203ENST00000445704 USP40Q9NVE5 1235 aa23.04■■□□□ 1.28
HDAC4-203ENST00000445704 MROH7-TTC4A0A0A0MT08 1334 aa23.04■■□□□ 1.28
HDAC4-203ENST00000445704 NSUN4Q96CB9 384 aaKnown RBP23.03■■□□□ 1.28
HDAC4-203ENST00000445704 KIF1BPQ96EK5 621 aa23.03■■□□□ 1.28
HDAC4-203ENST00000445704 FAM198AQ9UFP1 575 aa23.03■■□□□ 1.28
HDAC4-203ENST00000445704 TSKSQ9UJT2 592 aa23.03■■□□□ 1.28
HDAC4-203ENST00000445704 RFX7Q2KHR2 1363 aa23.02■■□□□ 1.28
HDAC4-203ENST00000445704 RPAP1Q9BWH6 1393 aaPredicted RBP23.02■■□□□ 1.28
HDAC4-203ENST00000445704 CYP2E1P05181 493 aaPredicted RBP23.02■■□□□ 1.28
HDAC4-203ENST00000445704 BTDP43251 543 aa23.02■■□□□ 1.28
HDAC4-203ENST00000445704 ZAP70P43403 619 aa23.02■■□□□ 1.28
HDAC4-203ENST00000445704 LBX1P52954 281 aa23.02■■□□□ 1.28
HDAC4-203ENST00000445704 MKRN3Q13064 507 aaKnown RBP23.02■■□□□ 1.28
HDAC4-203ENST00000445704 CSRNP1Q96S65 589 aa23.02■■□□□ 1.28
HDAC4-203ENST00000445704 BEGAINQ9BUH8 593 aa23.02■■□□□ 1.28
HDAC4-203ENST00000445704 RAI14Q9P0K7 980 aa23.02■■□□□ 1.28
HDAC4-203ENST00000445704 MAST2Q6P0Q8 1798 aa23.01■■□□□ 1.27
HDAC4-203ENST00000445704 TCP10Q12799 353 aa23.01■■□□□ 1.27
HDAC4-203ENST00000445704 SLF2Q8IX21 1173 aa23.01■■□□□ 1.27
HDAC4-203ENST00000445704 FAM151AQ8WW52 585 aa23.01■■□□□ 1.27
HDAC4-203ENST00000445704 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.01■■□□□ 1.27
HDAC4-203ENST00000445704 RAB11FIP3O75154 756 aa23■■□□□ 1.27
HDAC4-203ENST00000445704 IREB2P48200 963 aaKnown RBP23■■□□□ 1.27
HDAC4-203ENST00000445704 PIH1D3Q9NQM4 214 aaKnown RBP23■■□□□ 1.27
HDAC4-203ENST00000445704 LRP2BPQ9P2M1 347 aa23■■□□□ 1.27
HDAC4-203ENST00000445704 NDUFB9Q9Y6M9 179 aa23■■□□□ 1.27
HDAC4-203ENST00000445704 MYO5AQ9Y4I1 1855 aaKnown RBP23■■□□□ 1.27
HDAC4-203ENST00000445704 GPR75-ASB3A0A0A6YYF3 556 aa22.99■■□□□ 1.27
HDAC4-203ENST00000445704 SPRYD7Q5W111 196 aa22.99■■□□□ 1.27
HDAC4-203ENST00000445704 ZFPM1Q8IX07 1006 aa22.99■■□□□ 1.27
HDAC4-203ENST00000445704 CLASRPQ8N2M8 674 aaKnown RBP22.99■■□□□ 1.27
HDAC4-203ENST00000445704 RHBDL3P58872 404 aa22.98■■□□□ 1.27
HDAC4-203ENST00000445704 ANKRD13AQ8IZ07 590 aa22.98■■□□□ 1.27
HDAC4-203ENST00000445704 SLC10A4Q96EP9 437 aa22.98■■□□□ 1.27
HDAC4-203ENST00000445704 CRBNQ96SW2 442 aa22.98■■□□□ 1.27
HDAC4-203ENST00000445704 IDI2Q9BXS1 227 aa22.98■■□□□ 1.27
HDAC4-203ENST00000445704 BCL11AQ9H165 835 aa22.98■■□□□ 1.27
HDAC4-203ENST00000445704 PRDM10Q9NQV6 1147 aa22.98■■□□□ 1.27
HDAC4-203ENST00000445704 UNCXA6NJT0 531 aa22.97■■□□□ 1.27
HDAC4-203ENST00000445704 CA12O43570 354 aa22.97■■□□□ 1.27
HDAC4-203ENST00000445704 WDHD1O75717 1129 aaPredicted RBP22.97■■□□□ 1.27
HDAC4-203ENST00000445704 RGS3P49796 1198 aa22.97■■□□□ 1.27
HDAC4-203ENST00000445704 GSTO1P78417 241 aa22.97■■□□□ 1.27
HDAC4-203ENST00000445704 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.97■■□□□ 1.27
HDAC4-203ENST00000445704 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.97■■□□□ 1.27
HDAC4-203ENST00000445704 WNK4Q96J92 1243 aa22.97■■□□□ 1.27
HDAC4-203ENST00000445704 DDX4Q9NQI0 724 aaKnown RBP22.97■■□□□ 1.27
HDAC4-203ENST00000445704 PCDHB15Q9Y5E8 787 aa22.97■■□□□ 1.27
HDAC4-203ENST00000445704 LDHCP07864 332 aa22.96■■□□□ 1.27
HDAC4-203ENST00000445704 GJA5P36382 358 aa22.96■■□□□ 1.27
HDAC4-203ENST00000445704 ANTXR1Q9H6X2 564 aa22.96■■□□□ 1.27
HDAC4-203ENST00000445704 ELP3Q9H9T3 547 aa22.96■■□□□ 1.27
HDAC4-203ENST00000445704 ENTPD3O75355 529 aa22.95■■□□□ 1.26
HDAC4-203ENST00000445704 LAMB1P07942 1786 aa22.95■■□□□ 1.26
HDAC4-203ENST00000445704 IFIT2P09913 472 aaKnown RBP22.95■■□□□ 1.26
HDAC4-203ENST00000445704 VGLL4Q14135 290 aa22.95■■□□□ 1.26
HDAC4-203ENST00000445704 NAA16Q6N069 864 aaPredicted RBP22.95■■□□□ 1.26
HDAC4-203ENST00000445704 SH3BP5LQ7L8J4 393 aa22.95■■□□□ 1.26
HDAC4-203ENST00000445704 ADGRA1Q86SQ6 560 aa22.95■■□□□ 1.26
HDAC4-203ENST00000445704 RNF186Q9NXI6 227 aa22.95■■□□□ 1.26
HDAC4-203ENST00000445704 DOCK2Q92608 1830 aa22.94■■□□□ 1.26
HDAC4-203ENST00000445704 SMARCA5O60264 1052 aaPredicted RBP22.94■■□□□ 1.26
HDAC4-203ENST00000445704 MAP3K9P80192 1104 aa22.94■■□□□ 1.26
HDAC4-203ENST00000445704 PICALMQ13492 652 aa22.94■■□□□ 1.26
HDAC4-203ENST00000445704 MIGA2Q7L4E1 593 aa22.94■■□□□ 1.26
HDAC4-203ENST00000445704 REM2Q8IYK8 340 aaPredicted RBP22.94■■□□□ 1.26
HDAC4-203ENST00000445704 ATRNL1Q5VV63 1379 aa22.93■■□□□ 1.26
HDAC4-203ENST00000445704 TRPA1O75762 1119 aa22.93■■□□□ 1.26
HDAC4-203ENST00000445704 ZBTB48P10074 688 aaPredicted RBP22.93■■□□□ 1.26
HDAC4-203ENST00000445704 CNKSR2Q8WXI2 1034 aa22.93■■□□□ 1.26
HDAC4-203ENST00000445704 HOOK2Q96ED9 719 aa22.93■■□□□ 1.26
HDAC4-203ENST00000445704 WRNIP1Q96S55 665 aa22.93■■□□□ 1.26
HDAC4-203ENST00000445704 LRRCC1Q9C099 1032 aa22.93■■□□□ 1.26
HDAC4-203ENST00000445704 DCTPP1Q9H773 170 aa22.93■■□□□ 1.26
HDAC4-203ENST00000445704 SAGE1Q9NXZ1 904 aa22.93■■□□□ 1.26
HDAC4-203ENST00000445704 TM4SF4P48230 202 aa22.92■■□□□ 1.26
HDAC4-203ENST00000445704 DCAF15Q66K64 600 aa22.92■■□□□ 1.26
HDAC4-203ENST00000445704 SNCAIPQ9Y6H5 919 aa22.92■■□□□ 1.26
HDAC4-203ENST00000445704 AK9Q5TCS8 1911 aa22.92■■□□□ 1.26
HDAC4-203ENST00000445704 DDTLA6NHG4 134 aaPredicted RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms