RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CKAP4Q07065 602 aaKnown RBP18.93■□□□□ 0.62
TCOF1-206ENST00000445265 STX8Q9UNK0 236 aa18.93■□□□□ 0.62
TCOF1-206ENST00000445265 KAT6BQ8WYB5 2073 aa18.93■□□□□ 0.62
TCOF1-206ENST00000445265 TDRD12Q587J7 1177 aaKnown RBP18.93■□□□□ 0.62
TCOF1-206ENST00000445265 LRRC27Q9C0I9 530 aa18.93■□□□□ 0.62
TCOF1-206ENST00000445265 AKR1B15C9JRZ8 316 aaPredicted RBP18.92■□□□□ 0.62
TCOF1-206ENST00000445265 ATP6V1AP38606 617 aa18.92■□□□□ 0.62
TCOF1-206ENST00000445265 LPIN2Q92539 896 aa18.92■□□□□ 0.62
TCOF1-206ENST00000445265 PDIA3P30101 505 aaKnown RBP18.92■□□□□ 0.62
TCOF1-206ENST00000445265 ZMYM1Q5SVZ6 1142 aa18.92■□□□□ 0.62
TCOF1-206ENST00000445265 XPO4Q9C0E2 1151 aaKnown RBP18.92■□□□□ 0.62
TCOF1-206ENST00000445265 PYCARDQ9ULZ3 195 aa18.92■□□□□ 0.62
TCOF1-206ENST00000445265 SH3TC1Q8TE82 1336 aa18.92■□□□□ 0.62
TCOF1-206ENST00000445265 ARHGAP6O43182 974 aa18.92■□□□□ 0.62
TCOF1-206ENST00000445265 U2AF2P26368 475 aaKnown RBP eCLIP18.92■□□□□ 0.62
TCOF1-206ENST00000445265 PIP4K2BP78356 416 aa18.92■□□□□ 0.62
TCOF1-206ENST00000445265 PPP2R5BQ15173 497 aa18.92■□□□□ 0.62
TCOF1-206ENST00000445265 KIAA1524Q8TCG1 905 aa18.92■□□□□ 0.62
TCOF1-206ENST00000445265 A0A1W2PQ27 194 aa18.91■□□□□ 0.62
TCOF1-206ENST00000445265 A0A1W2PQ64 194 aa18.91■□□□□ 0.62
TCOF1-206ENST00000445265 A0A1W2PQD8 194 aa18.91■□□□□ 0.62
TCOF1-206ENST00000445265 GSTO1P78417 241 aa18.91■□□□□ 0.62
TCOF1-206ENST00000445265 TTC14Q96N46 770 aa18.91■□□□□ 0.62
TCOF1-206ENST00000445265 ZKSCAN3Q9BRR0 538 aa18.91■□□□□ 0.62
TCOF1-206ENST00000445265 TUBBP07437 444 aa18.91■□□□□ 0.62
TCOF1-206ENST00000445265 PCDHA7Q9UN72 937 aa18.91■□□□□ 0.62
TCOF1-206ENST00000445265 NCOA3Q9Y6Q9 1424 aa18.91■□□□□ 0.62
TCOF1-206ENST00000445265 CRB1P82279 1406 aa18.91■□□□□ 0.62
TCOF1-206ENST00000445265 PPP1R12BO60237 982 aaPredicted RBP18.91■□□□□ 0.62
TCOF1-206ENST00000445265 KARSQ15046 597 aaKnown RBP18.91■□□□□ 0.62
TCOF1-206ENST00000445265 SMARCC1Q92922 1105 aaPredicted RBP18.91■□□□□ 0.62
TCOF1-206ENST00000445265 KIDINS220Q9ULH0 1771 aa18.91■□□□□ 0.62
TCOF1-206ENST00000445265 ADAMTS2O95450 1211 aa18.91■□□□□ 0.62
TCOF1-206ENST00000445265 LMAN1P49257 510 aa18.91■□□□□ 0.62
TCOF1-206ENST00000445265 PHKBQ93100 1093 aa18.91■□□□□ 0.62
TCOF1-206ENST00000445265 CMA1P23946 247 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 ODF2Q5BJF6 829 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 VPS36Q86VN1 386 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 LRRC8AQ8IWT6 810 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 TSC1Q92574 1164 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 USP31Q70CQ4 1352 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 DDIT3P35638 169 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 ZSCAN29Q8IWY8 852 aaPredicted RBP18.9■□□□□ 0.62
TCOF1-206ENST00000445265 NSUN7Q8NE18 718 aaKnown RBP18.9■□□□□ 0.62
TCOF1-206ENST00000445265 TIGD1Q96MW7 591 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 CENPHQ9H3R5 247 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 LZTFL1Q9NQ48 299 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 JADE2Q9NQC1 790 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 MYO3AQ8NEV4 1616 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 ATP10DQ9P241 1426 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 ZNF532Q9HCE3 1301 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 POLR2DO15514 142 aaKnown RBP18.9■□□□□ 0.62
TCOF1-206ENST00000445265 PFKFB1P16118 471 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 CDC25BP30305 580 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 FBXO18Q8NFZ0 1043 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 ARMT1Q9H993 441 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 RTEL1Q9NZ71 1219 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 RCOR1Q9UKL0 485 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 ZNF76P36508 570 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 RBM6P78332 1123 aaKnown RBP18.9■□□□□ 0.62
TCOF1-206ENST00000445265 VWDEQ8N2E2 1590 aa18.9■□□□□ 0.62
TCOF1-206ENST00000445265 PRAMEF22A3QJZ6 481 aa18.89■□□□□ 0.62
TCOF1-206ENST00000445265 AKR1B10O60218 316 aa18.89■□□□□ 0.62
TCOF1-206ENST00000445265 TSPY3P0CV98 308 aa18.89■□□□□ 0.62
TCOF1-206ENST00000445265 TSPY8P0CW00 308 aa18.89■□□□□ 0.62
TCOF1-206ENST00000445265 EVCP57679 992 aa18.89■□□□□ 0.62
TCOF1-206ENST00000445265 KRT83P78385 493 aa18.89■□□□□ 0.62
TCOF1-206ENST00000445265 TTLL7Q6ZT98 887 aa18.89■□□□□ 0.62
TCOF1-206ENST00000445265 NLRP3Q96P20 1036 aa18.89■□□□□ 0.61
TCOF1-206ENST00000445265 NCAPD2Q15021 1401 aa18.89■□□□□ 0.61
TCOF1-206ENST00000445265 SHTN1A0MZ66 631 aa18.89■□□□□ 0.61
TCOF1-206ENST00000445265 FGAP02671 866 aa18.89■□□□□ 0.61
TCOF1-206ENST00000445265 CCDC40Q4G0X9 1142 aa18.89■□□□□ 0.61
TCOF1-206ENST00000445265 NFE2L3Q9Y4A8 694 aa18.89■□□□□ 0.61
TCOF1-206ENST00000445265 ADGRL3Q9HAR2 1447 aa18.89■□□□□ 0.61
TCOF1-206ENST00000445265 CIAO1O76071 339 aa18.89■□□□□ 0.61
TCOF1-206ENST00000445265 ELF2Q15723 593 aa18.89■□□□□ 0.61
TCOF1-206ENST00000445265 PARP10Q53GL7 1025 aa18.89■□□□□ 0.61
TCOF1-206ENST00000445265 DNAJC10Q8IXB1 793 aa18.89■□□□□ 0.61
TCOF1-206ENST00000445265 MCM6Q14566 821 aa18.88■□□□□ 0.61
TCOF1-206ENST00000445265 NBPF5PQ86XG9 351 aaPredicted RBP18.88■□□□□ 0.61
TCOF1-206ENST00000445265 NAA15Q9BXJ9 866 aaKnown RBP18.88■□□□□ 0.61
TCOF1-206ENST00000445265 MPHOSPH10O00566 681 aaKnown RBP18.88■□□□□ 0.61
TCOF1-206ENST00000445265 PTPN12Q05209 780 aaKnown RBP18.88■□□□□ 0.61
TCOF1-206ENST00000445265 GABPB1Q06547 395 aaPredicted RBP18.88■□□□□ 0.61
TCOF1-206ENST00000445265 LRRC24Q50LG9 513 aa18.88■□□□□ 0.61
TCOF1-206ENST00000445265 VAT1LQ9HCJ6 419 aa18.88■□□□□ 0.61
TCOF1-206ENST00000445265 CCDC96Q2M329 555 aa18.88■□□□□ 0.61
TCOF1-206ENST00000445265 ZNF569Q5MCW4 686 aa18.88■□□□□ 0.61
TCOF1-206ENST00000445265 KRT86O43790 486 aa18.88■□□□□ 0.61
TCOF1-206ENST00000445265 RBM5P52756 815 aaKnown RBP eCLIP18.88■□□□□ 0.61
TCOF1-206ENST00000445265 POSTNQ15063 836 aa18.88■□□□□ 0.61
TCOF1-206ENST00000445265 IGSF22Q8N9C0 903 aa18.88■□□□□ 0.61
TCOF1-206ENST00000445265 CTR9Q6PD62 1173 aa18.87■□□□□ 0.61
TCOF1-206ENST00000445265 TICAM2Q86XR7 235 aa18.87■□□□□ 0.61
TCOF1-206ENST00000445265 MROH5Q6ZUA9 1318 aa18.87■□□□□ 0.61
TCOF1-206ENST00000445265 DIP2CQ9Y2E4 1556 aa18.87■□□□□ 0.61
TCOF1-206ENST00000445265 HEATR3Q7Z4Q2 680 aa18.87■□□□□ 0.61
TCOF1-206ENST00000445265 RPGRQ92834 1020 aaKnown RBP18.87■□□□□ 0.61
TCOF1-206ENST00000445265 VWA3AA6NCI4 1184 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms