RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 DNAJC2Q99543 621 aaKnown RBP13.17□□□□□ -0.3
HDAC6-211ENST00000443563 HAUS7Q99871 368 aa13.17□□□□□ -0.3
HDAC6-211ENST00000443563 BOLA2Q9H3K6 86 aa13.17□□□□□ -0.3
HDAC6-211ENST00000443563 GBA2Q9HCG7 927 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-211ENST00000443563 USP40Q9NVE5 1235 aa13.17□□□□□ -0.3
HDAC6-211ENST00000443563 MYH7P12883 1935 aa13.16□□□□□ -0.3
HDAC6-211ENST00000443563 GPR75-ASB3A0A0A6YYF3 556 aa13.16□□□□□ -0.3
HDAC6-211ENST00000443563 TCP10L2B9ZVM9 353 aa13.16□□□□□ -0.3
HDAC6-211ENST00000443563 PLCG2P16885 1265 aa13.16□□□□□ -0.3
HDAC6-211ENST00000443563 BTDP43251 543 aa13.16□□□□□ -0.3
HDAC6-211ENST00000443563 CDC42EP5Q6NZY7 148 aa13.16□□□□□ -0.3
HDAC6-211ENST00000443563 HOOK2Q96ED9 719 aa13.16□□□□□ -0.3
HDAC6-211ENST00000443563 HHIPL1Q96JK4 782 aa13.16□□□□□ -0.3
HDAC6-211ENST00000443563 PIH1D3Q9NQM4 214 aaKnown RBP13.16□□□□□ -0.3
HDAC6-211ENST00000443563 PAG1Q9NWQ8 432 aa13.16□□□□□ -0.3
HDAC6-211ENST00000443563 SCAF8Q9UPN6 1271 aaKnown RBP13.16□□□□□ -0.3
HDAC6-211ENST00000443563 TLL2Q9Y6L7 1015 aa13.16□□□□□ -0.3
HDAC6-211ENST00000443563 AOX1Q06278 1338 aa13.15□□□□□ -0.3
HDAC6-211ENST00000443563 RASSF10A6NK89 507 aa13.15□□□□□ -0.3
HDAC6-211ENST00000443563 GOLIM4O00461 696 aa13.15□□□□□ -0.3
HDAC6-211ENST00000443563 IGHDP01880 384 aa13.15□□□□□ -0.3
HDAC6-211ENST00000443563 NEFLP07196 543 aa13.15□□□□□ -0.3
HDAC6-211ENST00000443563 MX1P20591 662 aa13.15□□□□□ -0.3
HDAC6-211ENST00000443563 DEFB115Q30KQ5 88 aa13.15□□□□□ -0.3
HDAC6-211ENST00000443563 ZSCAN25Q6NSZ9 544 aa13.15□□□□□ -0.3
HDAC6-211ENST00000443563 SAPCD2Q86UD0 394 aa13.15□□□□□ -0.3
HDAC6-211ENST00000443563 FAM151AQ8WW52 585 aa13.15□□□□□ -0.3
HDAC6-211ENST00000443563 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.15□□□□□ -0.32e-8■■■■□ 24.1
HDAC6-211ENST00000443563 RPAP1Q9BWH6 1393 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-211ENST00000443563 AK9Q5TCS8 1911 aa13.14□□□□□ -0.31
HDAC6-211ENST00000443563 PPP1R12BO60237 982 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-211ENST00000443563 GLRX3O76003 335 aaKnown RBP13.14□□□□□ -0.31
HDAC6-211ENST00000443563 ECE1P42892 770 aa13.14□□□□□ -0.31
HDAC6-211ENST00000443563 HTRA3P83110 453 aa13.14□□□□□ -0.31
HDAC6-211ENST00000443563 TTLL12Q14166 644 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-211ENST00000443563 DLK2Q6UY11 383 aa13.14□□□□□ -0.31
HDAC6-211ENST00000443563 ARMC9Q7Z3E5 817 aa13.14□□□□□ -0.31
HDAC6-211ENST00000443563 MAGEB6Q8N7X4 407 aa13.14□□□□□ -0.31
HDAC6-211ENST00000443563 ZNF384Q8TF68 577 aa13.14□□□□□ -0.31
HDAC6-211ENST00000443563 IDI2Q9BXS1 227 aa13.14□□□□□ -0.31
HDAC6-211ENST00000443563 ANTXR1Q9H6X2 564 aa13.14□□□□□ -0.31
HDAC6-211ENST00000443563 NDUFB9Q9Y6M9 179 aa13.14□□□□□ -0.31
HDAC6-211ENST00000443563 CNTNAP1P78357 1384 aa13.14□□□□□ -0.31
HDAC6-211ENST00000443563 UNCXA6NJT0 531 aa13.13□□□□□ -0.31
HDAC6-211ENST00000443563 ENTPD3O75355 529 aa13.13□□□□□ -0.31
HDAC6-211ENST00000443563 CYP7A1P22680 504 aa13.13□□□□□ -0.31
HDAC6-211ENST00000443563 CACNB3P54284 484 aa13.13□□□□□ -0.31
HDAC6-211ENST00000443563 HUNKP57058 714 aa13.13□□□□□ -0.31
HDAC6-211ENST00000443563 PPP4CP60510 307 aa13.13□□□□□ -0.31
HDAC6-211ENST00000443563 NUCB1Q02818 461 aa13.13□□□□□ -0.31
HDAC6-211ENST00000443563 LRRFIP1Q32MZ4 808 aaKnown RBP13.13□□□□□ -0.31
HDAC6-211ENST00000443563 SLC9C2Q5TAH2 1124 aa13.13□□□□□ -0.31
HDAC6-211ENST00000443563 PRAMEF18Q5VWM3 479 aa13.13□□□□□ -0.31
HDAC6-211ENST00000443563 B4GALNT3Q6L9W6 998 aa13.13□□□□□ -0.31
HDAC6-211ENST00000443563 CHD1LQ86WJ1 897 aa13.13□□□□□ -0.31
HDAC6-211ENST00000443563 KLRG1Q96E93 195 aa13.13□□□□□ -0.31
HDAC6-211ENST00000443563 TMEM39BQ9GZU3 492 aa13.13□□□□□ -0.31
HDAC6-211ENST00000443563 FOCADQ5VW36 1801 aa13.13□□□□□ -0.31
HDAC6-211ENST00000443563 PCNTO95613 3336 aa13.13□□□□□ -0.31
HDAC6-211ENST00000443563 NPM3O75607 178 aaKnown RBP13.12□□□□□ -0.31
HDAC6-211ENST00000443563 NBPF12Q5TAG4 269 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-211ENST00000443563 PAXIP1Q6ZW49 1069 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-211ENST00000443563 TEX11Q8IYF3 940 aa13.12□□□□□ -0.31
HDAC6-211ENST00000443563 DNAJC5GQ8N7S2 189 aa13.12□□□□□ -0.31
HDAC6-211ENST00000443563 LNPKQ9C0E8 428 aa13.12□□□□□ -0.31
HDAC6-211ENST00000443563 AATFQ9NY61 560 aaKnown RBP eCLIP13.12□□□□□ -0.31
HDAC6-211ENST00000443563 STAP2Q9UGK3 403 aa13.12□□□□□ -0.31
HDAC6-211ENST00000443563 MKRN1Q9UHC7 482 aaKnown RBP13.12□□□□□ -0.31
HDAC6-211ENST00000443563 SALL3Q9BXA9 1300 aa13.12□□□□□ -0.31
HDAC6-211ENST00000443563 CDK5RAP2Q96SN8 1893 aa13.11□□□□□ -0.31
HDAC6-211ENST00000443563 PDE6AP16499 860 aa13.11□□□□□ -0.31
HDAC6-211ENST00000443563 IREB2P48200 963 aaKnown RBP13.11□□□□□ -0.31
HDAC6-211ENST00000443563 RGS3P49796 1198 aa13.11□□□□□ -0.31
HDAC6-211ENST00000443563 RHBDL3P58872 404 aa13.11□□□□□ -0.31
HDAC6-211ENST00000443563 DCAF15Q66K64 600 aa13.11□□□□□ -0.31
HDAC6-211ENST00000443563 RGMBQ6NW40 437 aa13.11□□□□□ -0.31
HDAC6-211ENST00000443563 PI4K2BQ8TCG2 481 aa13.11□□□□□ -0.31
HDAC6-211ENST00000443563 TEPSINQ96N21 525 aa13.11□□□□□ -0.31
HDAC6-211ENST00000443563 FAM198AQ9UFP1 575 aa13.11□□□□□ -0.31
HDAC6-211ENST00000443563 RFX7Q2KHR2 1363 aa13.1□□□□□ -0.31
HDAC6-211ENST00000443563 WDHD1O75717 1129 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-211ENST00000443563 ZFYP08048 801 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-211ENST00000443563 PDE1AP54750 535 aa13.1□□□□□ -0.31
HDAC6-211ENST00000443563 TCP10Q12799 353 aa13.1□□□□□ -0.31
HDAC6-211ENST00000443563 NFIAQ12857 509 aa13.1□□□□□ -0.31
HDAC6-211ENST00000443563 PICALMQ13492 652 aa13.1□□□□□ -0.31
HDAC6-211ENST00000443563 MAP3K11Q16584 847 aa13.1□□□□□ -0.31
HDAC6-211ENST00000443563 TSHZ3Q63HK5 1081 aa13.1□□□□□ -0.31
HDAC6-211ENST00000443563 ZSCAN29Q8IWY8 852 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-211ENST00000443563 KBTBD3Q8NAB2 608 aa13.1□□□□□ -0.31
HDAC6-211ENST00000443563 SH3RF3Q8TEJ3 882 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-211ENST00000443563 CCDC102AQ96A19 550 aa13.1□□□□□ -0.31
HDAC6-211ENST00000443563 EDC3Q96F86 508 aaKnown RBP13.1□□□□□ -0.31
HDAC6-211ENST00000443563 ANGEL1Q9UNK9 670 aaKnown RBP13.1□□□□□ -0.31
HDAC6-211ENST00000443563 SSC5DA1L4H1 1573 aa13.1□□□□□ -0.31
HDAC6-211ENST00000443563 WDR33Q9C0J8 1336 aaKnown RBP13.1□□□□□ -0.31
HDAC6-211ENST00000443563 ZNF532Q9HCE3 1301 aa13.1□□□□□ -0.31
HDAC6-211ENST00000443563 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-211ENST00000443563 MAGEB6P1A0A0J9YX57 407 aa13.09□□□□□ -0.31
HDAC6-211ENST00000443563 ADD2P35612 726 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms