RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 ATRNL1Q5VV63 1379 aa9.84□□□□□ -0.83
SSXP3-201ENST00000442971 CACNA1HO95180 2353 aa9.84□□□□□ -0.83
SSXP3-201ENST00000442971 CHD7Q9P2D1 2997 aa9.84□□□□□ -0.83
SSXP3-201ENST00000442971 SPDYE5A6NIY4 337 aa9.83□□□□□ -0.84
SSXP3-201ENST00000442971 CD44P16070 742 aaKnown RBP9.83□□□□□ -0.84
SSXP3-201ENST00000442971 TEFQ10587 303 aa9.83□□□□□ -0.84
SSXP3-201ENST00000442971 TCF15Q12870 199 aa9.83□□□□□ -0.84
SSXP3-201ENST00000442971 TRIM32Q13049 653 aa9.83□□□□□ -0.84
SSXP3-201ENST00000442971 IER5LQ5T953 404 aa9.83□□□□□ -0.84
SSXP3-201ENST00000442971 ANKRD23Q86SG2 305 aa9.83□□□□□ -0.84
SSXP3-201ENST00000442971 ZKSCAN4Q969J2 545 aaPredicted RBP9.83□□□□□ -0.84
SSXP3-201ENST00000442971 PRRX2Q99811 253 aa9.83□□□□□ -0.84
SSXP3-201ENST00000442971 SENP6Q9GZR1 1112 aaPredicted RBP9.83□□□□□ -0.84
SSXP3-201ENST00000442971 CSADQ9Y600 493 aa9.83□□□□□ -0.84
SSXP3-201ENST00000442971 ZNF804BA4D1E1 1349 aa9.83□□□□□ -0.84
SSXP3-201ENST00000442971 MAP3K15Q6ZN16 1313 aa9.83□□□□□ -0.84
SSXP3-201ENST00000442971 DNAH14Q0VDD8 3507 aa9.83□□□□□ -0.84
SSXP3-201ENST00000442971 IRF6O14896 467 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 HOXB3P14651 431 aaPredicted RBP9.82□□□□□ -0.84
SSXP3-201ENST00000442971 PBX2P40425 430 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 ATN1P54259 1190 aaPredicted RBP9.82□□□□□ -0.84
SSXP3-201ENST00000442971 MAP3K9P80192 1104 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 PBX4Q9BYU1 374 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 PRDM5Q9NQX1 630 aaPredicted RBP9.82□□□□□ -0.84
SSXP3-201ENST00000442971 KCNH4Q9UQ05 1017 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 USP24Q9UPU5 2620 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 KCNQ3O43525 872 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 DCXO43602 365 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 SLC24A1O60721 1099 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 COL4A1P02462 1669 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 HCLS1P14317 486 aaPredicted RBP9.82□□□□□ -0.84
SSXP3-201ENST00000442971 EPHB4P54760 987 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 RTP1P59025 263 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 DACT2Q5SW24 774 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 CCDC129Q6ZRS4 1044 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 DGLUCYQ7Z3D6 616 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 NGEFQ8N5V2 710 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 MYO3BQ8WXR4 1341 aa9.82□□□□□ -0.84
SSXP3-201ENST00000442971 UTP14AQ9BVJ6 771 aaKnown RBP9.82□□□□□ -0.84
SSXP3-201ENST00000442971 POTEB3A0JP26 581 aa9.81□□□□□ -0.84
SSXP3-201ENST00000442971 SOWAHBA6NEL2 793 aa9.81□□□□□ -0.84
SSXP3-201ENST00000442971 UFL1O94874 794 aa9.81□□□□□ -0.84
SSXP3-201ENST00000442971 SSTR3P32745 418 aaPredicted RBP9.81□□□□□ -0.84
SSXP3-201ENST00000442971 PARP10Q53GL7 1025 aa9.81□□□□□ -0.84
SSXP3-201ENST00000442971 POTEBQ6S5H4 581 aa9.81□□□□□ -0.84
SSXP3-201ENST00000442971 ASCL5Q7RTU5 278 aa9.81□□□□□ -0.84
SSXP3-201ENST00000442971 ERO1BQ86YB8 467 aa9.81□□□□□ -0.84
SSXP3-201ENST00000442971 CELF1Q92879 486 aaKnown RBP9.81□□□□□ -0.84
SSXP3-201ENST00000442971 COA7Q96BR5 231 aa9.81□□□□□ -0.84
SSXP3-201ENST00000442971 TRPC6Q9Y210 931 aa9.81□□□□□ -0.84
SSXP3-201ENST00000442971 ATP11BQ9Y2G3 1177 aa9.81□□□□□ -0.84
SSXP3-201ENST00000442971 PRRC2BQ5JSZ5 2229 aaKnown RBP9.8□□□□□ -0.84
SSXP3-201ENST00000442971 PLXNA3P51805 1871 aa9.8□□□□□ -0.84
SSXP3-201ENST00000442971 SIPA1L3O60292 1781 aaPredicted RBP9.8□□□□□ -0.84
SSXP3-201ENST00000442971 GVINP1Q7Z2Y8 2422 aa9.8□□□□□ -0.84
SSXP3-201ENST00000442971 SNRPA1P09661 255 aaKnown RBP9.8□□□□□ -0.84
SSXP3-201ENST00000442971 KIF6Q6ZMV9 814 aa9.8□□□□□ -0.84
SSXP3-201ENST00000442971 FAM178BQ8IXR5 827 aa9.8□□□□□ -0.84
SSXP3-201ENST00000442971 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.8□□□□□ -0.84
SSXP3-201ENST00000442971 HLA-CQ95604 372 aa9.8□□□□□ -0.84
SSXP3-201ENST00000442971 PARK7Q99497 189 aaKnown RBP9.8□□□□□ -0.84
SSXP3-201ENST00000442971 PODXL2Q9NZ53 605 aa9.8□□□□□ -0.84
SSXP3-201ENST00000442971 ECM29Q5VYK3 1845 aa9.79□□□□□ -0.84
SSXP3-201ENST00000442971 CEMIPQ8WUJ3 1361 aa9.79□□□□□ -0.84
SSXP3-201ENST00000442971 A0A0G2JMZ2 1700 aa9.79□□□□□ -0.84
SSXP3-201ENST00000442971 CYP2C8P10632 490 aa9.79□□□□□ -0.84
SSXP3-201ENST00000442971 PPIL2Q13356 520 aa9.79□□□□□ -0.84
SSXP3-201ENST00000442971 RASA3Q14644 834 aa9.79□□□□□ -0.84
SSXP3-201ENST00000442971 DLGAP5Q15398 846 aa9.79□□□□□ -0.84
SSXP3-201ENST00000442971 MTHFSDQ2M296 383 aaKnown RBP9.79□□□□□ -0.84
SSXP3-201ENST00000442971 FBXW7Q969H0 707 aa9.79□□□□□ -0.84
SSXP3-201ENST00000442971 L3MBTL2Q969R5 705 aa9.79□□□□□ -0.84
SSXP3-201ENST00000442971 CARD14Q9BXL6 1004 aa9.79□□□□□ -0.84
SSXP3-201ENST00000442971 ZBTB3Q9H5J0 574 aa9.79□□□□□ -0.84
SSXP3-201ENST00000442971 COL4A6Q14031 1691 aa9.79□□□□□ -0.84
SSXP3-201ENST00000442971 TRIOO75962 3097 aa9.78□□□□□ -0.84
SSXP3-201ENST00000442971 CLRN2A0PK11 232 aa9.78□□□□□ -0.84
SSXP3-201ENST00000442971 GRXCR1A8MXD5 290 aa9.78□□□□□ -0.84
SSXP3-201ENST00000442971 PROB1E7EW31 1015 aa9.78□□□□□ -0.84
SSXP3-201ENST00000442971 MAP3K21Q5TCX8 1036 aa9.78□□□□□ -0.84
SSXP3-201ENST00000442971 LHX8Q68G74 356 aa9.78□□□□□ -0.84
SSXP3-201ENST00000442971 TTLL7Q6ZT98 887 aa9.78□□□□□ -0.84
SSXP3-201ENST00000442971 KIAA0825Q8IV33 1275 aa9.78□□□□□ -0.84
SSXP3-201ENST00000442971 ATOH1Q92858 354 aaPredicted RBP9.78□□□□□ -0.84
SSXP3-201ENST00000442971 VEZTQ9HBM0 779 aa9.78□□□□□ -0.84
SSXP3-201ENST00000442971 GGA1Q9UJY5 639 aa9.78□□□□□ -0.84
SSXP3-201ENST00000442971 SNCAIPQ9Y6H5 919 aa9.78□□□□□ -0.84
SSXP3-201ENST00000442971 ASH1LQ9NR48 2969 aaKnown RBP9.77□□□□□ -0.85
SSXP3-201ENST00000442971 TRIM43BA6NCK2 446 aa9.77□□□□□ -0.85
SSXP3-201ENST00000442971 STRIP1Q5VSL9 837 aa9.77□□□□□ -0.85
SSXP3-201ENST00000442971 GIGYF2Q6Y7W6 1299 aaKnown RBP9.77□□□□□ -0.85
SSXP3-201ENST00000442971 SH3RF1Q7Z6J0 888 aa9.77□□□□□ -0.85
SSXP3-201ENST00000442971 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.77□□□□□ -0.85
SSXP3-201ENST00000442971 IL17REQ8NFR9 667 aa9.77□□□□□ -0.85
SSXP3-201ENST00000442971 TRIM43Q96BQ3 446 aaPredicted RBP9.77□□□□□ -0.85
SSXP3-201ENST00000442971 CARD11Q9BXL7 1154 aa9.77□□□□□ -0.85
SSXP3-201ENST00000442971 IRF2BPLQ9H1B7 796 aa9.77□□□□□ -0.85
SSXP3-201ENST00000442971 PDLIM7Q9NR12 457 aa9.77□□□□□ -0.85
SSXP3-201ENST00000442971 ANKIB1Q9P2G1 1089 aa9.77□□□□□ -0.85
SSXP3-201ENST00000442971 DMXL1Q9Y485 3027 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 999.9 ms