RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 L3MBTL3Q96JM7 780 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-208ENST00000419606 ZDHHC15Q96MV8 337 aa15.44■□□□□ 0.06
ATG4B-208ENST00000419606 MRIQ9BWK5 157 aa15.44■□□□□ 0.06
ATG4B-208ENST00000419606 HELLSQ9NRZ9 838 aa15.44■□□□□ 0.06
ATG4B-208ENST00000419606 ECM29Q5VYK3 1845 aa15.44■□□□□ 0.06
ATG4B-208ENST00000419606 ASTN2O75129 1339 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-208ENST00000419606 SPDYE2BA6NHP3 402 aa15.43■□□□□ 0.06
ATG4B-208ENST00000419606 H7C1D1 291 aa15.43■□□□□ 0.06
ATG4B-208ENST00000419606 SGSM2O43147 1006 aa15.43■□□□□ 0.06
ATG4B-208ENST00000419606 GPAA1O43292 621 aa15.43■□□□□ 0.06
ATG4B-208ENST00000419606 IGSF3O75054 1194 aa15.43■□□□□ 0.06
ATG4B-208ENST00000419606 SPDYE6P0CI01 402 aa15.43■□□□□ 0.06
ATG4B-208ENST00000419606 HIRAP54198 1017 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-208ENST00000419606 CACNB3P54284 484 aa15.43■□□□□ 0.06
ATG4B-208ENST00000419606 RHBDL3P58872 404 aa15.43■□□□□ 0.06
ATG4B-208ENST00000419606 DLGAP5Q15398 846 aa15.43■□□□□ 0.06
ATG4B-208ENST00000419606 VPS53Q5VIR6 699 aa15.43■□□□□ 0.06
ATG4B-208ENST00000419606 TICAM2Q86XR7 235 aa15.43■□□□□ 0.06
ATG4B-208ENST00000419606 SLF2Q8IX21 1173 aa15.43■□□□□ 0.06
ATG4B-208ENST00000419606 ZNF526Q8TF50 670 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-208ENST00000419606 STRBPQ96SI9 672 aaKnown RBP15.43■□□□□ 0.06
ATG4B-208ENST00000419606 TDRD3Q9H7E2 651 aaKnown RBP15.43■□□□□ 0.06
ATG4B-208ENST00000419606 WNT10BO00744 389 aa15.42■□□□□ 0.06
ATG4B-208ENST00000419606 FOXP2O15409 715 aa15.42■□□□□ 0.06
ATG4B-208ENST00000419606 PPP4CP60510 307 aa15.42■□□□□ 0.06
ATG4B-208ENST00000419606 KIF4BQ2VIQ3 1234 aa15.42■□□□□ 0.06
ATG4B-208ENST00000419606 CDC42EP5Q6NZY7 148 aa15.42■□□□□ 0.06
ATG4B-208ENST00000419606 MTMR14Q8NCE2 650 aa15.42■□□□□ 0.06
ATG4B-208ENST00000419606 AIDAQ96BJ3 306 aa15.42■□□□□ 0.06
ATG4B-208ENST00000419606 USP40Q9NVE5 1235 aa15.42■□□□□ 0.06
ATG4B-208ENST00000419606 SCAF8Q9UPN6 1271 aaKnown RBP15.42■□□□□ 0.06
ATG4B-208ENST00000419606 CCDC171Q6TFL3 1326 aa15.42■□□□□ 0.06
ATG4B-208ENST00000419606 CLRN2A0PK11 232 aa15.41■□□□□ 0.06
ATG4B-208ENST00000419606 LMOD1P29536 600 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-208ENST00000419606 SDR42E1Q8WUS8 393 aa15.41■□□□□ 0.06
ATG4B-208ENST00000419606 RRAGCQ9HB90 399 aa15.41■□□□□ 0.06
ATG4B-208ENST00000419606 HACL1Q9UJ83 578 aa15.41■□□□□ 0.06
ATG4B-208ENST00000419606 SCN4AP35499 1836 aa15.4■□□□□ 0.06
ATG4B-208ENST00000419606 FOCADQ5VW36 1801 aa15.4■□□□□ 0.06
ATG4B-208ENST00000419606 BAG3O95817 575 aa15.4■□□□□ 0.06
ATG4B-208ENST00000419606 EPHX2P34913 555 aa15.4■□□□□ 0.06
ATG4B-208ENST00000419606 PTH1RQ03431 593 aa15.4■□□□□ 0.06
ATG4B-208ENST00000419606 NFIAQ12857 509 aa15.4■□□□□ 0.06
ATG4B-208ENST00000419606 TMED8Q6PL24 325 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-208ENST00000419606 CASC1Q6TDU7 716 aa15.4■□□□□ 0.06
ATG4B-208ENST00000419606 TEX11Q8IYF3 940 aa15.4■□□□□ 0.06
ATG4B-208ENST00000419606 RUFY2Q8WXA3 655 aa15.4■□□□□ 0.06
ATG4B-208ENST00000419606 NOL10Q9BSC4 688 aaKnown RBP15.4■□□□□ 0.06
ATG4B-208ENST00000419606 DDX4Q9NQI0 724 aaKnown RBP15.4■□□□□ 0.06
ATG4B-208ENST00000419606 ADARB2Q9NS39 739 aaKnown RBP15.4■□□□□ 0.06
ATG4B-208ENST00000419606 ZNF70Q9UC06 446 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-208ENST00000419606 GSG1L2A8MUP6 293 aa15.39■□□□□ 0.05
ATG4B-208ENST00000419606 WDHD1O75717 1129 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-208ENST00000419606 TGFBRAP1Q8WUH2 860 aa15.39■□□□□ 0.05
ATG4B-208ENST00000419606 LSG1Q9H089 658 aaKnown RBP15.39■□□□□ 0.05
ATG4B-208ENST00000419606 TAF1DQ9H5J8 278 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-208ENST00000419606 EPB41L4AQ9HCS5 686 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-208ENST00000419606 NMRK2Q9NPI5 230 aa15.39■□□□□ 0.05
ATG4B-208ENST00000419606 SLC4A4Q9Y6R1 1079 aa15.39■□□□□ 0.05
ATG4B-208ENST00000419606 RAD50Q92878 1312 aa15.39■□□□□ 0.05
ATG4B-208ENST00000419606 BAZ2AQ9UIF9 1905 aaKnown RBP15.39■□□□□ 0.05
ATG4B-208ENST00000419606 POTEIP0CG38 1075 aa15.38■□□□□ 0.05
ATG4B-208ENST00000419606 POTEJP0CG39 1038 aa15.38■□□□□ 0.05
ATG4B-208ENST00000419606 HSPD1P10809 573 aaKnown RBP15.38■□□□□ 0.05
ATG4B-208ENST00000419606 EVX2Q03828 476 aa15.38■□□□□ 0.05
ATG4B-208ENST00000419606 PICALMQ13492 652 aa15.38■□□□□ 0.05
ATG4B-208ENST00000419606 SPDYE2Q495Y8 402 aa15.38■□□□□ 0.05
ATG4B-208ENST00000419606 MAPKAPK5Q8IW41 473 aa15.38■□□□□ 0.05
ATG4B-208ENST00000419606 ZFPM1Q8IX07 1006 aa15.38■□□□□ 0.05
ATG4B-208ENST00000419606 CRNKL1Q9BZJ0 848 aaKnown RBP15.38■□□□□ 0.05
ATG4B-208ENST00000419606 NAV1Q8NEY1 1877 aa15.37■□□□□ 0.05
ATG4B-208ENST00000419606 TCP10L2B9ZVM9 353 aa15.37■□□□□ 0.05
ATG4B-208ENST00000419606 SMIM22K7EJ46 135 aa15.37■□□□□ 0.05
ATG4B-208ENST00000419606 MMP14P50281 582 aa15.37■□□□□ 0.05
ATG4B-208ENST00000419606 MFAP1P55081 439 aaKnown RBP15.37■□□□□ 0.05
ATG4B-208ENST00000419606 ANGEL2Q5VTE6 544 aaKnown RBP15.37■□□□□ 0.05
ATG4B-208ENST00000419606 VEZTQ9HBM0 779 aa15.37■□□□□ 0.05
ATG4B-208ENST00000419606 ANO2Q9NQ90 1003 aa15.37■□□□□ 0.05
ATG4B-208ENST00000419606 FAM198AQ9UFP1 575 aa15.37■□□□□ 0.05
ATG4B-208ENST00000419606 PATL2C9JE40 543 aaKnown RBP15.36■□□□□ 0.05
ATG4B-208ENST00000419606 APPP05067 770 aa15.36■□□□□ 0.05
ATG4B-208ENST00000419606 USP5P45974 858 aa15.36■□□□□ 0.05
ATG4B-208ENST00000419606 TCP10Q12799 353 aa15.36■□□□□ 0.05
ATG4B-208ENST00000419606 SLC4A8Q2Y0W8 1093 aa15.36■□□□□ 0.05
ATG4B-208ENST00000419606 EAPPQ56P03 285 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-208ENST00000419606 IFNL3Q8IZI9 196 aa15.36■□□□□ 0.05
ATG4B-208ENST00000419606 BACH2Q9BYV9 841 aa15.36■□□□□ 0.05
ATG4B-208ENST00000419606 DCP1AQ9NPI6 582 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-208ENST00000419606 GGA3Q9NZ52 723 aa15.36■□□□□ 0.05
ATG4B-208ENST00000419606 MKRN1Q9UHC7 482 aaKnown RBP15.36■□□□□ 0.05
ATG4B-208ENST00000419606 SAP30BPQ9UHR5 308 aaKnown RBP15.36■□□□□ 0.05
ATG4B-208ENST00000419606 DDX60LQ5H9U9 1706 aaKnown RBP15.36■□□□□ 0.05
ATG4B-208ENST00000419606 POLR2AP24928 1970 aaKnown RBP15.36■□□□□ 0.05
ATG4B-208ENST00000419606 FLT1P17948 1338 aa15.36■□□□□ 0.05
ATG4B-208ENST00000419606 CNTNAP1P78357 1384 aa15.36■□□□□ 0.05
ATG4B-208ENST00000419606 MYH1P12882 1939 aa15.35■□□□□ 0.05
ATG4B-208ENST00000419606 CYP2D7A0A087X1C5 515 aa15.35■□□□□ 0.05
ATG4B-208ENST00000419606 IQCA1LA6NCM1 817 aa15.35■□□□□ 0.05
ATG4B-208ENST00000419606 CYP2D6P10635 497 aa15.35■□□□□ 0.05
ATG4B-208ENST00000419606 PLCG2P16885 1265 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 234 ms