RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 HAND2P61296 217 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 IFIT5Q13325 482 aaKnown RBP11.32□□□□□ -0.6
CD44-206ENST00000415148 CPLX2Q6PUV4 134 aaKnown RBP11.32□□□□□ -0.6
CD44-206ENST00000415148 CABLES1Q8TDN4 633 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 DPF2Q92785 391 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 HSD3B7Q9H2F3 369 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 ANGEL1Q9UNK9 670 aaKnown RBP11.32□□□□□ -0.6
CD44-206ENST00000415148 HPSEQ9Y251 543 aa11.32□□□□□ -0.6
CD44-206ENST00000415148 CBFA2T2O43439 604 aa11.31□□□□□ -0.6
CD44-206ENST00000415148 SFPQP23246 707 aaKnown RBP eCLIP11.31□□□□□ -0.6
CD44-206ENST00000415148 ADORA1P30542 326 aa11.31□□□□□ -0.6
CD44-206ENST00000415148 CADPS2Q86UW7 1296 aa11.31□□□□□ -0.6
CD44-206ENST00000415148 ZBTB38Q8NAP3 1195 aaPredicted RBP11.31□□□□□ -0.6
CD44-206ENST00000415148 TMEM87BQ96K49 555 aa11.31□□□□□ -0.6
CD44-206ENST00000415148 EPC1Q9H2F5 836 aa11.31□□□□□ -0.6
CD44-206ENST00000415148 L2HGDHQ9H9P8 463 aa11.31□□□□□ -0.6
CD44-206ENST00000415148 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.31□□□□□ -0.6
CD44-206ENST00000415148 CDHR2Q9BYE9 1310 aa11.31□□□□□ -0.6
CD44-206ENST00000415148 ADD2P35612 726 aa11.31□□□□□ -0.6
CD44-206ENST00000415148 SYKP43405 635 aa11.31□□□□□ -0.6
CD44-206ENST00000415148 UBE3CQ15386 1083 aa11.31□□□□□ -0.6
CD44-206ENST00000415148 CCDC93Q567U6 631 aa11.31□□□□□ -0.6
CD44-206ENST00000415148 HSP90AB3PQ58FF7 597 aa11.31□□□□□ -0.6
CD44-206ENST00000415148 TAF7LQ5H9L4 462 aa11.31□□□□□ -0.6
CD44-206ENST00000415148 MROH7-TTC4A0A0A0MT08 1334 aa11.3□□□□□ -0.6
CD44-206ENST00000415148 H2AFXP16104 143 aaPredicted RBP11.3□□□□□ -0.6
CD44-206ENST00000415148 LMOD1P29536 600 aaPredicted RBP11.3□□□□□ -0.6
CD44-206ENST00000415148 CLCN6P51797 869 aa11.3□□□□□ -0.6
CD44-206ENST00000415148 FANCCQ00597 558 aa11.3□□□□□ -0.6
CD44-206ENST00000415148 SCARF1Q14162 830 aa11.3□□□□□ -0.6
CD44-206ENST00000415148 ALG1Q9BT22 464 aa11.3□□□□□ -0.6
CD44-206ENST00000415148 DENND2AQ9ULE3 1009 aa11.3□□□□□ -0.6
CD44-206ENST00000415148 RIPOR2Q9Y4F9 1068 aa11.3□□□□□ -0.6
CD44-206ENST00000415148 FHOD1Q9Y613 1164 aa11.3□□□□□ -0.6
CD44-206ENST00000415148 WDHD1O75717 1129 aaPredicted RBP11.3□□□□□ -0.6
CD44-206ENST00000415148 METAP2P50579 478 aaKnown RBP eCLIP11.3□□□□□ -0.6
CD44-206ENST00000415148 ALX1Q15699 326 aa11.3□□□□□ -0.6
CD44-206ENST00000415148 DDX17Q92841 729 aaKnown RBP11.3□□□□□ -0.6
CD44-206ENST00000415148 SH2B2O14492 632 aaPredicted RBP11.29□□□□□ -0.6
CD44-206ENST00000415148 CUTAO60888 179 aa11.29□□□□□ -0.6
CD44-206ENST00000415148 FAM193AP78312 1265 aa11.29□□□□□ -0.6
CD44-206ENST00000415148 PTPAQ15257 358 aa11.29□□□□□ -0.6
CD44-206ENST00000415148 KIF6Q6ZMV9 814 aa11.29□□□□□ -0.6
CD44-206ENST00000415148 AIFM3Q96NN9 605 aa11.29□□□□□ -0.6
CD44-206ENST00000415148 MAP3K15Q6ZN16 1313 aa11.29□□□□□ -0.6
CD44-206ENST00000415148 IL2RBP14784 551 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 MYL5Q02045 173 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 RESP18Q5W5W9 173 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 KRT40Q6A162 431 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 SGMS1Q86VZ5 419 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 FCHSD1Q86WN1 690 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 MAP3K14Q99558 947 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 TMX1Q9H3N1 280 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 STK36Q9NRP7 1315 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 TMEM232C9JQI7 657 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 SEC31AO94979 1220 aaKnown RBP11.28□□□□□ -0.6
CD44-206ENST00000415148 MARCKSP29966 332 aaPredicted RBP11.28□□□□□ -0.6
CD44-206ENST00000415148 MCAMP43121 646 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 PLA2G4AP47712 749 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 METTL24Q5JXM2 366 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 APOA5Q6Q788 366 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 TOM1L2Q6ZVM7 507 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 VPS37DQ86XT2 251 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 NOL10Q9BSC4 688 aaKnown RBP11.28□□□□□ -0.6
CD44-206ENST00000415148 CARD10Q9BWT7 1032 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 NBPF3Q9H094 633 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 HOOK1Q9UJC3 728 aaKnown RBP11.28□□□□□ -0.6
CD44-206ENST00000415148 AKAP11Q9UKA4 1901 aa11.28□□□□□ -0.6
CD44-206ENST00000415148 UQCRFS1P1P0C7P4 283 aa11.27□□□□□ -0.6
CD44-206ENST00000415148 LIFRP42702 1097 aa11.27□□□□□ -0.6
CD44-206ENST00000415148 TRIM29Q14134 588 aa11.27□□□□□ -0.6
CD44-206ENST00000415148 SLC9C2Q5TAH2 1124 aa11.27□□□□□ -0.6
CD44-206ENST00000415148 CCDC102BQ68D86 513 aa11.27□□□□□ -0.6
CD44-206ENST00000415148 TRIM65Q6PJ69 517 aa11.27□□□□□ -0.6
CD44-206ENST00000415148 SHC4Q6S5L8 630 aa11.27□□□□□ -0.6
CD44-206ENST00000415148 OLFM4Q6UX06 510 aa11.27□□□□□ -0.6
CD44-206ENST00000415148 LDHAL6AQ6ZMR3 332 aa11.27□□□□□ -0.6
CD44-206ENST00000415148 CYB5R4Q7L1T6 521 aa11.27□□□□□ -0.6
CD44-206ENST00000415148 IGDCC4Q8TDY8 1250 aa11.27□□□□□ -0.6
CD44-206ENST00000415148 WASF1Q92558 559 aa11.27□□□□□ -0.6
CD44-206ENST00000415148 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.27□□□□□ -0.6
CD44-206ENST00000415148 RIC1Q4ADV7 1423 aa11.27□□□□□ -0.6
CD44-206ENST00000415148 PHLPP2Q6ZVD8 1323 aa11.27□□□□□ -0.6
CD44-206ENST00000415148 ANKRD18BA2A2Z9 1011 aa11.27□□□□□ -0.61
CD44-206ENST00000415148 ZBTB43O43298 467 aa11.27□□□□□ -0.61
CD44-206ENST00000415148 IARSP41252 1262 aaKnown RBP11.27□□□□□ -0.61
CD44-206ENST00000415148 UBASH3AP57075 661 aa11.27□□□□□ -0.61
CD44-206ENST00000415148 GNL2Q13823 731 aaKnown RBP11.27□□□□□ -0.61
CD44-206ENST00000415148 NTRK3Q16288 839 aa11.27□□□□□ -0.61
CD44-206ENST00000415148 ARHGAP29Q52LW3 1261 aa11.27□□□□□ -0.61
CD44-206ENST00000415148 HSP90AA4PQ58FG1 418 aa11.27□□□□□ -0.61
CD44-206ENST00000415148 GIGYF2Q6Y7W6 1299 aaKnown RBP11.27□□□□□ -0.61
CD44-206ENST00000415148 FAM89AQ96GI7 184 aa11.27□□□□□ -0.61
CD44-206ENST00000415148 SRRTQ9BXP5 876 aaKnown RBP11.27□□□□□ -0.61
CD44-206ENST00000415148 TMEM51Q9NW97 253 aa11.27□□□□□ -0.61
CD44-206ENST00000415148 DNAI1Q9UI46 699 aa11.27□□□□□ -0.61
CD44-206ENST00000415148 NID2Q14112 1375 aa11.27□□□□□ -0.61
CD44-206ENST00000415148 SHANK3Q9BYB0 1731 aa11.27□□□□□ -0.61
CD44-206ENST00000415148 UBE2Q2LH0YL09 131 aa11.26□□□□□ -0.61
CD44-206ENST00000415148 ARID4AP29374 1257 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms