RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 PCDHB15Q9Y5E8 787 aa17.93■□□□□ 0.46
CHD1-202ENST00000414220 POLR2AP24928 1970 aaKnown RBP17.93■□□□□ 0.46
CHD1-202ENST00000414220 MAP2K2P36507 400 aa17.92■□□□□ 0.46
CHD1-202ENST00000414220 ZAP70P43403 619 aa17.92■□□□□ 0.46
CHD1-202ENST00000414220 IREB2P48200 963 aaKnown RBP17.92■□□□□ 0.46
CHD1-202ENST00000414220 NAA16Q6N069 864 aaPredicted RBP17.92■□□□□ 0.46
CHD1-202ENST00000414220 CDC42EP5Q6NZY7 148 aa17.92■□□□□ 0.46
CHD1-202ENST00000414220 MROH7-TTC4A0A0A0MT08 1334 aa17.92■□□□□ 0.46
CHD1-202ENST00000414220 UNCXA6NJT0 531 aa17.91■□□□□ 0.46
CHD1-202ENST00000414220 CYP2E1P05181 493 aaPredicted RBP17.91■□□□□ 0.46
CHD1-202ENST00000414220 BTDP43251 543 aa17.91■□□□□ 0.46
CHD1-202ENST00000414220 MAP2K1Q02750 393 aaPredicted RBP17.91■□□□□ 0.46
CHD1-202ENST00000414220 MAP3K12Q12852 859 aa17.91■□□□□ 0.46
CHD1-202ENST00000414220 NOGQ13253 232 aa17.91■□□□□ 0.46
CHD1-202ENST00000414220 NSUN4Q96CB9 384 aaKnown RBP17.91■□□□□ 0.46
CHD1-202ENST00000414220 GCC1Q96CN9 775 aa17.91■□□□□ 0.46
CHD1-202ENST00000414220 BEGAINQ9BUH8 593 aa17.91■□□□□ 0.46
CHD1-202ENST00000414220 RWDD1Q9H446 243 aaPredicted RBP17.91■□□□□ 0.46
CHD1-202ENST00000414220 ANGEL1Q9UNK9 670 aaKnown RBP17.91■□□□□ 0.46
CHD1-202ENST00000414220 GAKO14976 1311 aa17.91■□□□□ 0.46
CHD1-202ENST00000414220 PLCG2P16885 1265 aa17.9■□□□□ 0.46
CHD1-202ENST00000414220 PRKG1Q13976 671 aa17.9■□□□□ 0.46
CHD1-202ENST00000414220 FAM151AQ8WW52 585 aa17.9■□□□□ 0.46
CHD1-202ENST00000414220 AIDAQ96BJ3 306 aa17.9■□□□□ 0.46
CHD1-202ENST00000414220 GPR75-ASB3A0A0A6YYF3 556 aa17.89■□□□□ 0.45
CHD1-202ENST00000414220 UBE2Q2LH0YL09 131 aa17.89■□□□□ 0.45
CHD1-202ENST00000414220 IDH1O75874 414 aaKnown RBP17.89■□□□□ 0.45
CHD1-202ENST00000414220 CACNB3P54284 484 aa17.89■□□□□ 0.45
CHD1-202ENST00000414220 HDAC1Q13547 482 aaPredicted RBP17.89■□□□□ 0.45
CHD1-202ENST00000414220 NBPF12Q5TAG4 269 aaPredicted RBP17.89■□□□□ 0.45
CHD1-202ENST00000414220 DCAF15Q66K64 600 aa17.89■□□□□ 0.45
CHD1-202ENST00000414220 CERS3Q8IU89 383 aa17.89■□□□□ 0.45
CHD1-202ENST00000414220 AOX1Q06278 1338 aa17.89■□□□□ 0.45
CHD1-202ENST00000414220 SMARCA5O60264 1052 aaPredicted RBP17.88■□□□□ 0.45
CHD1-202ENST00000414220 ENTPD3O75355 529 aa17.88■□□□□ 0.45
CHD1-202ENST00000414220 ATP5JP18859 108 aa17.88■□□□□ 0.45
CHD1-202ENST00000414220 REM2Q8IYK8 340 aaPredicted RBP17.88■□□□□ 0.45
CHD1-202ENST00000414220 DNAJC2Q99543 621 aaKnown RBP17.88■□□□□ 0.45
CHD1-202ENST00000414220 IDI2Q9BXS1 227 aa17.88■□□□□ 0.45
CHD1-202ENST00000414220 TMEM39BQ9GZU3 492 aa17.88■□□□□ 0.45
CHD1-202ENST00000414220 ECHDC1Q9NTX5 307 aa17.88■□□□□ 0.45
CHD1-202ENST00000414220 PAPPA2Q9BXP8 1791 aa17.87■□□□□ 0.45
CHD1-202ENST00000414220 ECM29Q5VYK3 1845 aa17.87■□□□□ 0.45
CHD1-202ENST00000414220 TCP10Q12799 353 aa17.87■□□□□ 0.45
CHD1-202ENST00000414220 MAP3K11Q16584 847 aa17.87■□□□□ 0.45
CHD1-202ENST00000414220 ZSCAN29Q8IWY8 852 aaPredicted RBP17.87■□□□□ 0.45
CHD1-202ENST00000414220 EXOC6Q8TAG9 804 aa17.87■□□□□ 0.45
CHD1-202ENST00000414220 SLC10A4Q96EP9 437 aa17.87■□□□□ 0.45
CHD1-202ENST00000414220 MOB2Q70IA6 237 aa17.86■□□□□ 0.45
CHD1-202ENST00000414220 ANKRD13AQ8IZ07 590 aa17.86■□□□□ 0.45
CHD1-202ENST00000414220 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.86■□□□□ 0.45
CHD1-202ENST00000414220 BOLA2Q9H3K6 86 aa17.86■□□□□ 0.45
CHD1-202ENST00000414220 PIH1D3Q9NQM4 214 aaKnown RBP17.86■□□□□ 0.45
CHD1-202ENST00000414220 GOLIM4O00461 696 aa17.85■□□□□ 0.45
CHD1-202ENST00000414220 ERC2O15083 957 aa17.85■□□□□ 0.45
CHD1-202ENST00000414220 SLC10A3P09131 477 aa17.85■□□□□ 0.45
CHD1-202ENST00000414220 CYP7A1P22680 504 aa17.85■□□□□ 0.45
CHD1-202ENST00000414220 LDLRAD1Q5T700 205 aa17.85■□□□□ 0.45
CHD1-202ENST00000414220 ANKRD45Q5TZF3 282 aa17.85■□□□□ 0.45
CHD1-202ENST00000414220 MAGEB6Q8N7X4 407 aa17.85■□□□□ 0.45
CHD1-202ENST00000414220 TEPSINQ96N21 525 aa17.85■□□□□ 0.45
CHD1-202ENST00000414220 RPAP1Q9BWH6 1393 aaPredicted RBP17.85■□□□□ 0.45
CHD1-202ENST00000414220 PAG1Q9NWQ8 432 aa17.85■□□□□ 0.45
CHD1-202ENST00000414220 CSADQ9Y600 493 aa17.85■□□□□ 0.45
CHD1-202ENST00000414220 AOC2O75106 756 aa17.84■□□□□ 0.45
CHD1-202ENST00000414220 USP2O75604 605 aaPredicted RBP17.84■□□□□ 0.45
CHD1-202ENST00000414220 NPM3O75607 178 aaKnown RBP17.84■□□□□ 0.45
CHD1-202ENST00000414220 HSPA1AP0DMV8 641 aaKnown RBP17.84■□□□□ 0.45
CHD1-202ENST00000414220 HSPA1BP0DMV9 641 aaKnown RBP17.84■□□□□ 0.45
CHD1-202ENST00000414220 RGS3P49796 1198 aa17.84■□□□□ 0.45
CHD1-202ENST00000414220 PPP4CP60510 307 aa17.84■□□□□ 0.45
CHD1-202ENST00000414220 PICALMQ13492 652 aa17.84■□□□□ 0.45
CHD1-202ENST00000414220 ZSCAN25Q6NSZ9 544 aa17.84■□□□□ 0.45
CHD1-202ENST00000414220 TEX11Q8IYF3 940 aa17.84■□□□□ 0.45
CHD1-202ENST00000414220 HAUS7Q99871 368 aa17.84■□□□□ 0.45
CHD1-202ENST00000414220 ZNF341Q9BYN7 854 aa17.84■□□□□ 0.45
CHD1-202ENST00000414220 AATFQ9NY61 560 aaKnown RBP eCLIP17.84■□□□□ 0.45
CHD1-202ENST00000414220 CEP350Q5VT06 3117 aa17.83■□□□□ 0.45
CHD1-202ENST00000414220 TTC41PQ6P2S7 1318 aa17.83■□□□□ 0.44
CHD1-202ENST00000414220 MAP3K9P80192 1104 aa17.83■□□□□ 0.44
CHD1-202ENST00000414220 NFIAQ12857 509 aa17.83■□□□□ 0.44
CHD1-202ENST00000414220 ANTXR1Q9H6X2 564 aa17.83■□□□□ 0.44
CHD1-202ENST00000414220 FAM198AQ9UFP1 575 aa17.83■□□□□ 0.44
CHD1-202ENST00000414220 NDUFB9Q9Y6M9 179 aa17.83■□□□□ 0.44
CHD1-202ENST00000414220 CA12O43570 354 aa17.82■□□□□ 0.44
CHD1-202ENST00000414220 RHBDL3P58872 404 aa17.82■□□□□ 0.44
CHD1-202ENST00000414220 KIF23Q02241 960 aaPredicted RBP17.82■□□□□ 0.44
CHD1-202ENST00000414220 LRRFIP1Q32MZ4 808 aaKnown RBP17.82■□□□□ 0.44
CHD1-202ENST00000414220 SLC9C2Q5TAH2 1124 aa17.82■□□□□ 0.44
CHD1-202ENST00000414220 RASAL3Q86YV0 1011 aa17.82■□□□□ 0.44
CHD1-202ENST00000414220 ZNF384Q8TF68 577 aa17.82■□□□□ 0.44
CHD1-202ENST00000414220 CSRNP1Q96S65 589 aa17.82■□□□□ 0.44
CHD1-202ENST00000414220 WBP1LQ9NX94 342 aa17.82■□□□□ 0.44
CHD1-202ENST00000414220 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.82■□□□□ 0.44
CHD1-202ENST00000414220 MYH2Q9UKX2 1941 aa17.81■□□□□ 0.44
CHD1-202ENST00000414220 FAM155AB1AL88 458 aaPredicted RBP17.81■□□□□ 0.44
CHD1-202ENST00000414220 WDHD1O75717 1129 aaPredicted RBP17.81■□□□□ 0.44
CHD1-202ENST00000414220 DHX36Q9H2U1 1008 aaKnown RBP17.81■□□□□ 0.44
CHD1-202ENST00000414220 GLRX3O76003 335 aaKnown RBP17.8■□□□□ 0.44
CHD1-202ENST00000414220 ZBTB48P10074 688 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms