RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 ATP10DQ9P241 1426 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 MARF1Q9Y4F3 1742 aaKnown RBP6.76□□□□□ -1.33
PRDM2-206ENST00000413440 UBE2Q2LH0YL09 131 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 EYA2O00167 538 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 CPLX1O14810 134 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 TOMM70O94826 608 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 CSPP1Q1MSJ5 1256 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 RNF20Q5VTR2 975 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 HOMER1Q86YM7 354 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 TBC1D16Q8TBP0 767 aa6.76□□□□□ -1.33
PRDM2-206ENST00000413440 PUS3Q9BZE2 481 aaKnown RBP6.76□□□□□ -1.33
PRDM2-206ENST00000413440 TRPM3Q9HCF6 1732 aaPredicted RBP6.75□□□□□ -1.33
PRDM2-206ENST00000413440 A0A1B0GUL7 405 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 BTDP43251 543 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 GPC2Q8N158 579 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 RAB11FIP3O75154 756 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 RGPD2P0DJD1 1756 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 DDX11L8A8MPP1 907 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 ADM5C9JUS6 153 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 KMT5BQ4FZB7 885 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 AXDND1Q5T1B0 1012 aaPredicted RBP6.75□□□□□ -1.33
PRDM2-206ENST00000413440 SLC17A8Q8NDX2 589 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 TDRD3Q9H7E2 651 aaKnown RBP6.75□□□□□ -1.33
PRDM2-206ENST00000413440 VAT1LQ9HCJ6 419 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 MINPP1Q9UNW1 487 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 MYO3BQ8WXR4 1341 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 TRAF5O00463 557 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 CRKP46108 304 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 RAET1EQ8TD07 263 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 CSRNP1Q96S65 589 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 GBA2Q9HCG7 927 aaPredicted RBP6.75□□□□□ -1.33
PRDM2-206ENST00000413440 GLTPD2A6NH11 291 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 HMGB1P09429 215 aaKnown RBP6.75□□□□□ -1.33
PRDM2-206ENST00000413440 C1QTNF8P60827 252 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 STK3Q13188 491 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 WRNIP1Q96S55 665 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 SMC3Q9UQE7 1217 aa6.75□□□□□ -1.33
PRDM2-206ENST00000413440 CCDC69A6NI79 296 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 B4DLN1 442 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 IPO7O95373 1038 aaKnown RBP6.74□□□□□ -1.33
PRDM2-206ENST00000413440 MRPL12P52815 198 aaKnown RBP6.74□□□□□ -1.33
PRDM2-206ENST00000413440 SPATA5Q8NB90 893 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 SLC4A9Q96Q91 983 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 LRRC37A3O60309 1634 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 NTSR2O95665 410 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 NBPF7P0C2Y1 421 aaPredicted RBP6.74□□□□□ -1.33
PRDM2-206ENST00000413440 TRIM27P14373 513 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 SLC9C2Q5TAH2 1124 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 CYP4F22Q6NT55 531 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 UBAC1Q9BSL1 405 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 TSPY2A6NKD2 308 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 PABPC4Q13310 644 aaKnown RBP eCLIP6.74□□□□□ -1.33
PRDM2-206ENST00000413440 PTGER2P43116 358 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 CWC27Q6UX04 472 aaKnown RBP6.74□□□□□ -1.33
PRDM2-206ENST00000413440 TBC1D9Q6ZT07 1266 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 USP50Q70EL3 339 aaPredicted RBP6.74□□□□□ -1.33
PRDM2-206ENST00000413440 BRMS1Q9HCU9 246 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 ZNF76P36508 570 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 AAMPQ13685 434 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 TSHZ3Q63HK5 1081 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 ZNF34Q8IZ26 560 aa6.74□□□□□ -1.33
PRDM2-206ENST00000413440 BRWD3Q6RI45 1802 aa6.73□□□□□ -1.33
PRDM2-206ENST00000413440 ZNF541Q9H0D2 1346 aa6.73□□□□□ -1.33
PRDM2-206ENST00000413440 TRPA1O75762 1119 aa6.73□□□□□ -1.33
PRDM2-206ENST00000413440 HOXD10P28358 340 aa6.73□□□□□ -1.33
PRDM2-206ENST00000413440 PDE4BQ07343 736 aa6.73□□□□□ -1.33
PRDM2-206ENST00000413440 BRDTQ58F21 947 aaPredicted RBP6.73□□□□□ -1.33
PRDM2-206ENST00000413440 NCAPG2Q86XI2 1143 aa6.73□□□□□ -1.33
PRDM2-206ENST00000413440 FAM208AQ9UK61 1670 aaKnown RBP6.73□□□□□ -1.33
PRDM2-206ENST00000413440 VIMP08670 466 aaKnown RBP6.73□□□□□ -1.33
PRDM2-206ENST00000413440 NEK4P51957 841 aa6.73□□□□□ -1.33
PRDM2-206ENST00000413440 LRRC45Q96CN5 670 aa6.73□□□□□ -1.33
PRDM2-206ENST00000413440 ZFYVE28Q9HCC9 887 aa6.73□□□□□ -1.33
PRDM2-206ENST00000413440 ARHGEF10LQ9HCE6 1279 aa6.73□□□□□ -1.33
PRDM2-206ENST00000413440 UBN2Q6ZU65 1347 aa6.73□□□□□ -1.33
PRDM2-206ENST00000413440 HMGB3O15347 200 aaKnown RBP6.73□□□□□ -1.33
PRDM2-206ENST00000413440 DGKZQ13574 1117 aa6.73□□□□□ -1.33
PRDM2-206ENST00000413440 PALM3A6NDB9 673 aaPredicted RBP6.73□□□□□ -1.33
PRDM2-206ENST00000413440 KIF4AO95239 1232 aa6.73□□□□□ -1.33
PRDM2-206ENST00000413440 CCDC173Q0VFZ6 552 aa6.73□□□□□ -1.33
PRDM2-206ENST00000413440 TM4SF1P30408 202 aa6.72□□□□□ -1.33
PRDM2-206ENST00000413440 MAP2K1Q02750 393 aaPredicted RBP6.72□□□□□ -1.33
PRDM2-206ENST00000413440 PODNQ7Z5L7 613 aa6.72□□□□□ -1.33
PRDM2-206ENST00000413440 GOPCQ9HD26 462 aa6.72□□□□□ -1.33
PRDM2-206ENST00000413440 TNNQ9UQP3 1299 aa6.72□□□□□ -1.33
PRDM2-206ENST00000413440 ADCY9O60503 1353 aa6.72□□□□□ -1.33
PRDM2-206ENST00000413440 TTC16Q8NEE8 873 aa6.72□□□□□ -1.33
PRDM2-206ENST00000413440 TTLL11Q8NHH1 800 aa6.72□□□□□ -1.33
PRDM2-206ENST00000413440 DPF3Q92784 378 aa6.72□□□□□ -1.33
PRDM2-206ENST00000413440 SPATA32Q96LK8 384 aa6.72□□□□□ -1.33
PRDM2-206ENST00000413440 ARMT1Q9H993 441 aa6.72□□□□□ -1.33
PRDM2-206ENST00000413440 SNAP23O00161 211 aa6.72□□□□□ -1.33
PRDM2-206ENST00000413440 HIP1O00291 1037 aa6.72□□□□□ -1.33
PRDM2-206ENST00000413440 TAF1CQ15572 869 aaPredicted RBP6.72□□□□□ -1.33
PRDM2-206ENST00000413440 SPOUT1Q5T280 376 aaKnown RBP6.72□□□□□ -1.33
PRDM2-206ENST00000413440 TTC6Q86TZ1 520 aa6.72□□□□□ -1.33
PRDM2-206ENST00000413440 BICD2Q8TD16 824 aa6.72□□□□□ -1.33
PRDM2-206ENST00000413440 CD209Q9NNX6 404 aa6.72□□□□□ -1.33
PRDM2-206ENST00000413440 RPS12P25398 132 aaKnown RBP6.72□□□□□ -1.33
PRDM2-206ENST00000413440 CDR1P51861 262 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms