RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CENPBP07199 599 aaPredicted RBP27.22■■□□□ 1.95
PTCD3-203ENST00000409783 BTDP43251 543 aa27.22■■□□□ 1.95
PTCD3-203ENST00000409783 RHBDL3P58872 404 aa27.22■■□□□ 1.95
PTCD3-203ENST00000409783 NUCB1Q02818 461 aa27.22■■□□□ 1.95
PTCD3-203ENST00000409783 TNFAIP1Q13829 316 aa27.22■■□□□ 1.95
PTCD3-203ENST00000409783 TTF1Q15361 905 aaPredicted RBP27.22■■□□□ 1.95
PTCD3-203ENST00000409783 B4GALNT3Q6L9W6 998 aa27.22■■□□□ 1.95
PTCD3-203ENST00000409783 NAA16Q6N069 864 aaPredicted RBP27.22■■□□□ 1.95
PTCD3-203ENST00000409783 ADGRA1Q86SQ6 560 aa27.22■■□□□ 1.95
PTCD3-203ENST00000409783 USP40Q9NVE5 1235 aa27.22■■□□□ 1.95
PTCD3-203ENST00000409783 PAG1Q9NWQ8 432 aa27.22■■□□□ 1.95
PTCD3-203ENST00000409783 SSC5DA1L4H1 1573 aa27.22■■□□□ 1.95
PTCD3-203ENST00000409783 RFX7Q2KHR2 1363 aa27.22■■□□□ 1.95
PTCD3-203ENST00000409783 DNAJC5GQ8N7S2 189 aa27.21■■□□□ 1.95
PTCD3-203ENST00000409783 PI4K2BQ8TCG2 481 aa27.21■■□□□ 1.95
PTCD3-203ENST00000409783 GPATCH3Q96I76 525 aa27.21■■□□□ 1.95
PTCD3-203ENST00000409783 TEPSINQ96N21 525 aa27.21■■□□□ 1.95
PTCD3-203ENST00000409783 TLL2Q9Y6L7 1015 aa27.21■■□□□ 1.95
PTCD3-203ENST00000409783 MX1P20591 662 aa27.2■■□□□ 1.94
PTCD3-203ENST00000409783 NFIAQ12857 509 aa27.2■■□□□ 1.94
PTCD3-203ENST00000409783 FAM83AQ86UY5 434 aa27.2■■□□□ 1.94
PTCD3-203ENST00000409783 LNPKQ9C0E8 428 aa27.2■■□□□ 1.94
PTCD3-203ENST00000409783 GBA2Q9HCG7 927 aaPredicted RBP27.2■■□□□ 1.94
PTCD3-203ENST00000409783 TMOD2Q9NZR1 351 aa27.2■■□□□ 1.94
PTCD3-203ENST00000409783 MYH7P12883 1935 aa27.2■■□□□ 1.94
PTCD3-203ENST00000409783 PAPPA2Q9BXP8 1791 aa27.2■■□□□ 1.94
PTCD3-203ENST00000409783 SAPCD2Q86UD0 394 aa27.19■■□□□ 1.94
PTCD3-203ENST00000409783 CHD1LQ86WJ1 897 aa27.19■■□□□ 1.94
PTCD3-203ENST00000409783 CDAN1Q8IWY9 1227 aa27.19■■□□□ 1.94
PTCD3-203ENST00000409783 TMEM39BQ9GZU3 492 aa27.19■■□□□ 1.94
PTCD3-203ENST00000409783 ZBTB47Q9UFB7 747 aaPredicted RBP27.19■■□□□ 1.94
PTCD3-203ENST00000409783 FAM198AQ9UFP1 575 aa27.19■■□□□ 1.94
PTCD3-203ENST00000409783 STAP2Q9UGK3 403 aa27.19■■□□□ 1.94
PTCD3-203ENST00000409783 CEP350Q5VT06 3117 aa27.19■■□□□ 1.94
PTCD3-203ENST00000409783 WDHD1O75717 1129 aaPredicted RBP27.18■■□□□ 1.94
PTCD3-203ENST00000409783 TNNI2P48788 182 aa27.18■■□□□ 1.94
PTCD3-203ENST00000409783 MAP3K12Q12852 859 aa27.18■■□□□ 1.94
PTCD3-203ENST00000409783 NBPF12Q5TAG4 269 aaPredicted RBP27.18■■□□□ 1.94
PTCD3-203ENST00000409783 MAGEB6Q8N7X4 407 aa27.18■■□□□ 1.94
PTCD3-203ENST00000409783 IDI2Q9BXS1 227 aa27.18■■□□□ 1.94
PTCD3-203ENST00000409783 CDK5RAP2Q96SN8 1893 aa27.18■■□□□ 1.94
PTCD3-203ENST00000409783 RASSF10A6NK89 507 aa27.17■■□□□ 1.94
PTCD3-203ENST00000409783 CYP7A1P22680 504 aa27.17■■□□□ 1.94
PTCD3-203ENST00000409783 PPP4CP60510 307 aa27.17■■□□□ 1.94
PTCD3-203ENST00000409783 TMED8Q6PL24 325 aaPredicted RBP27.17■■□□□ 1.94
PTCD3-203ENST00000409783 PDE6AP16499 860 aa27.16■■□□□ 1.94
PTCD3-203ENST00000409783 PDE1AP54750 535 aa27.16■■□□□ 1.94
PTCD3-203ENST00000409783 C2orf69Q8N8R5 385 aa27.16■■□□□ 1.94
PTCD3-203ENST00000409783 ABT1Q9ULW3 272 aaKnown RBP27.16■■□□□ 1.94
PTCD3-203ENST00000409783 RPAP1Q9BWH6 1393 aaPredicted RBP27.16■■□□□ 1.94
PTCD3-203ENST00000409783 TCRBV5S4A2TA0A5A2 114 aa27.15■■□□□ 1.94
PTCD3-203ENST00000409783 GLRX3O76003 335 aaKnown RBP27.15■■□□□ 1.94
PTCD3-203ENST00000409783 MAP4K4O95819 1239 aaPredicted RBP27.15■■□□□ 1.94
PTCD3-203ENST00000409783 MOB2Q70IA6 237 aa27.15■■□□□ 1.94
PTCD3-203ENST00000409783 FAM151AQ8WW52 585 aa27.15■■□□□ 1.94
PTCD3-203ENST00000409783 DDX4Q9NQI0 724 aaKnown RBP27.15■■□□□ 1.94
PTCD3-203ENST00000409783 AATFQ9NY61 560 aaKnown RBP eCLIP27.15■■□□□ 1.94
PTCD3-203ENST00000409783 FOCADQ5VW36 1801 aa27.15■■□□□ 1.94
PTCD3-203ENST00000409783 ERC2O15083 957 aa27.14■■□□□ 1.94
PTCD3-203ENST00000409783 RGS3P49796 1198 aa27.14■■□□□ 1.94
PTCD3-203ENST00000409783 FKBP1BP68106 108 aa27.14■■□□□ 1.94
PTCD3-203ENST00000409783 SLC9C2Q5TAH2 1124 aa27.14■■□□□ 1.94
PTCD3-203ENST00000409783 ZFPM1Q8IX07 1006 aa27.14■■□□□ 1.94
PTCD3-203ENST00000409783 NF2P35240 595 aa27.13■■□□□ 1.93
PTCD3-203ENST00000409783 SUPT20HL1Q3ZLR7 823 aa27.13■■□□□ 1.93
PTCD3-203ENST00000409783 SH3RF3Q8TEJ3 882 aaPredicted RBP27.13■■□□□ 1.93
PTCD3-203ENST00000409783 MKRN1Q9UHC7 482 aaKnown RBP27.13■■□□□ 1.93
PTCD3-203ENST00000409783 ENTPD3O75355 529 aa27.12■■□□□ 1.93
PTCD3-203ENST00000409783 NPM3O75607 178 aaKnown RBP27.12■■□□□ 1.93
PTCD3-203ENST00000409783 BAG3O95817 575 aa27.12■■□□□ 1.93
PTCD3-203ENST00000409783 CHGBP05060 677 aa27.12■■□□□ 1.93
PTCD3-203ENST00000409783 ADD2P35612 726 aa27.12■■□□□ 1.93
PTCD3-203ENST00000409783 DYNLL1P63167 89 aaKnown RBP27.12■■□□□ 1.93
PTCD3-203ENST00000409783 TCP10Q12799 353 aa27.12■■□□□ 1.93
PTCD3-203ENST00000409783 DEFB115Q30KQ5 88 aa27.12■■□□□ 1.93
PTCD3-203ENST00000409783 PLEKHM2Q8IWE5 1019 aa27.12■■□□□ 1.93
PTCD3-203ENST00000409783 KLRG1Q96E93 195 aa27.12■■□□□ 1.93
PTCD3-203ENST00000409783 HHIPL1Q96JK4 782 aa27.12■■□□□ 1.93
PTCD3-203ENST00000409783 FZD1Q9UP38 647 aa27.12■■□□□ 1.93
PTCD3-203ENST00000409783 ZNF532Q9HCE3 1301 aa27.12■■□□□ 1.93
PTCD3-203ENST00000409783 HUNKP57058 714 aa27.11■■□□□ 1.93
PTCD3-203ENST00000409783 SLFNL1Q499Z3 407 aa27.11■■□□□ 1.93
PTCD3-203ENST00000409783 KBTBD3Q8NAB2 608 aa27.11■■□□□ 1.93
PTCD3-203ENST00000409783 MIGA1Q8NAN2 632 aa27.11■■□□□ 1.93
PTCD3-203ENST00000409783 NOL10Q9BSC4 688 aaKnown RBP27.11■■□□□ 1.93
PTCD3-203ENST00000409783 AK9Q5TCS8 1911 aa27.1■■□□□ 1.93
PTCD3-203ENST00000409783 MAP3K11Q16584 847 aa27.1■■□□□ 1.93
PTCD3-203ENST00000409783 SH3BP5LQ7L8J4 393 aa27.1■■□□□ 1.93
PTCD3-203ENST00000409783 TEX11Q8IYF3 940 aa27.1■■□□□ 1.93
PTCD3-203ENST00000409783 RIOK1Q9BRS2 568 aaKnown RBP27.1■■□□□ 1.93
PTCD3-203ENST00000409783 UBE2Q2LH0YL09 131 aa27.09■■□□□ 1.93
PTCD3-203ENST00000409783 PLCG2P16885 1265 aa27.09■■□□□ 1.93
PTCD3-203ENST00000409783 PDE4AP27815 886 aa27.09■■□□□ 1.93
PTCD3-203ENST00000409783 PRKG1Q13976 671 aa27.09■■□□□ 1.93
PTCD3-203ENST00000409783 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.09■■□□□ 1.932e-7■■■■□ 22
PTCD3-203ENST00000409783 OSBPL3Q9H4L5 887 aa27.09■■□□□ 1.93
PTCD3-203ENST00000409783 OTOFQ9HC10 1997 aa27.08■■□□□ 1.93
PTCD3-203ENST00000409783 USP2O75604 605 aaPredicted RBP27.08■■□□□ 1.93
PTCD3-203ENST00000409783 PICALMQ13492 652 aa27.08■■□□□ 1.93
PTCD3-203ENST00000409783 UBE3CQ15386 1083 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms