RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ERICH6Q7L0X2 663 aa19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 EDC3Q96F86 508 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 PRMT6Q96LA8 375 aaPredicted RBP19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 FSD1Q9BTV5 496 aa19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 MRIQ9BWK5 157 aa19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 ANTXR1Q9H6X2 564 aa19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 ZNF408Q9H9D4 720 aa19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 MKRN1Q9UHC7 482 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 MAST2Q6P0Q8 1798 aa19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 RFX7Q2KHR2 1363 aa19.97■□□□□ 0.79
TSPAN4-208ENST00000409531 SPDYE2BA6NHP3 402 aa19.97■□□□□ 0.79
TSPAN4-208ENST00000409531 MYO1BO43795 1136 aa19.97■□□□□ 0.79
TSPAN4-208ENST00000409531 SPDYE6P0CI01 402 aa19.97■□□□□ 0.79
TSPAN4-208ENST00000409531 HDLBPQ00341 1268 aaKnown RBP19.97■□□□□ 0.79
TSPAN4-208ENST00000409531 TBC1D9Q6ZT07 1266 aa19.97■□□□□ 0.79
TSPAN4-208ENST00000409531 MAST3O60307 1309 aa19.96■□□□□ 0.79
TSPAN4-208ENST00000409531 RASSF10A6NK89 507 aa19.96■□□□□ 0.79
TSPAN4-208ENST00000409531 IDH1O75874 414 aaKnown RBP19.96■□□□□ 0.79
TSPAN4-208ENST00000409531 PIH1D3Q9NQM4 214 aaKnown RBP19.96■□□□□ 0.79
TSPAN4-208ENST00000409531 RAI14Q9P0K7 980 aa19.96■□□□□ 0.79
TSPAN4-208ENST00000409531 PCDHAC2Q9Y5I4 1007 aa19.96■□□□□ 0.79
TSPAN4-208ENST00000409531 TLL2Q9Y6L7 1015 aa19.96■□□□□ 0.79
TSPAN4-208ENST00000409531 MYH2Q9UKX2 1941 aa19.95■□□□□ 0.78
TSPAN4-208ENST00000409531 HIP1O00291 1037 aa19.95■□□□□ 0.78
TSPAN4-208ENST00000409531 ZFYP08048 801 aaPredicted RBP19.95■□□□□ 0.78
TSPAN4-208ENST00000409531 CRKP46108 304 aa19.95■□□□□ 0.78
TSPAN4-208ENST00000409531 SAPCD2Q86UD0 394 aa19.95■□□□□ 0.78
TSPAN4-208ENST00000409531 DZIP1Q86YF9 867 aaKnown RBP19.95■□□□□ 0.78
TSPAN4-208ENST00000409531 APOBEC3FQ8IUX4 373 aaKnown RBP19.95■□□□□ 0.78
TSPAN4-208ENST00000409531 CDCA5Q96FF9 252 aa19.95■□□□□ 0.78
TSPAN4-208ENST00000409531 SCAF8Q9UPN6 1271 aaKnown RBP19.95■□□□□ 0.78
TSPAN4-208ENST00000409531 CNTNAP1P78357 1384 aa19.94■□□□□ 0.78
TSPAN4-208ENST00000409531 PRDX5P30044 214 aa19.94■□□□□ 0.78
TSPAN4-208ENST00000409531 SLF2Q8IX21 1173 aa19.94■□□□□ 0.78
TSPAN4-208ENST00000409531 TRPM7Q96QT4 1865 aa19.93■□□□□ 0.78
TSPAN4-208ENST00000409531 GSTO1P78417 241 aa19.93■□□□□ 0.78
TSPAN4-208ENST00000409531 C2orf69Q8N8R5 385 aa19.93■□□□□ 0.78
TSPAN4-208ENST00000409531 TEKT1Q969V4 418 aa19.93■□□□□ 0.78
TSPAN4-208ENST00000409531 SLC9C2Q5TAH2 1124 aa19.92■□□□□ 0.78
TSPAN4-208ENST00000409531 CASC1Q6TDU7 716 aa19.92■□□□□ 0.78
TSPAN4-208ENST00000409531 HHIPL1Q96JK4 782 aa19.92■□□□□ 0.78
TSPAN4-208ENST00000409531 GBA2Q9HCG7 927 aaPredicted RBP19.92■□□□□ 0.78
TSPAN4-208ENST00000409531 CLRN2A0PK11 232 aa19.91■□□□□ 0.78
TSPAN4-208ENST00000409531 LDHCP07864 332 aa19.91■□□□□ 0.78
TSPAN4-208ENST00000409531 VEGFBP49765 207 aa19.91■□□□□ 0.78
TSPAN4-208ENST00000409531 UBE3CQ15386 1083 aa19.91■□□□□ 0.78
TSPAN4-208ENST00000409531 PRAMEF18Q5VWM3 479 aa19.91■□□□□ 0.78
TSPAN4-208ENST00000409531 NAA16Q6N069 864 aaPredicted RBP19.91■□□□□ 0.78
TSPAN4-208ENST00000409531 HHIPL2Q6UWX4 724 aa19.91■□□□□ 0.78
TSPAN4-208ENST00000409531 NSUN4Q96CB9 384 aaKnown RBP19.91■□□□□ 0.78
TSPAN4-208ENST00000409531 ZDHHC15Q96MV8 337 aa19.91■□□□□ 0.78
TSPAN4-208ENST00000409531 DEFB129Q9H1M3 183 aa19.91■□□□□ 0.78
TSPAN4-208ENST00000409531 TDRD3Q9H7E2 651 aaKnown RBP19.91■□□□□ 0.78
TSPAN4-208ENST00000409531 DIAPH3Q9NSV4 1193 aa19.91■□□□□ 0.78
TSPAN4-208ENST00000409531 RNF113AO15541 343 aaKnown RBP19.9■□□□□ 0.78
TSPAN4-208ENST00000409531 CDC45O75419 566 aa19.9■□□□□ 0.78
TSPAN4-208ENST00000409531 PDE6AP16499 860 aa19.9■□□□□ 0.78
TSPAN4-208ENST00000409531 ADD2P35612 726 aa19.9■□□□□ 0.78
TSPAN4-208ENST00000409531 MECOMQ03112 1051 aa19.9■□□□□ 0.78
TSPAN4-208ENST00000409531 SPDYE2Q495Y8 402 aa19.9■□□□□ 0.78
TSPAN4-208ENST00000409531 MAGEB6Q8N7X4 407 aa19.9■□□□□ 0.78
TSPAN4-208ENST00000409531 ZNF70Q9UC06 446 aaPredicted RBP19.9■□□□□ 0.78
TSPAN4-208ENST00000409531 ECE1P42892 770 aa19.89■□□□□ 0.77
TSPAN4-208ENST00000409531 HUNKP57058 714 aa19.89■□□□□ 0.77
TSPAN4-208ENST00000409531 FKBP1BP68106 108 aa19.89■□□□□ 0.77
TSPAN4-208ENST00000409531 VEZTQ9HBM0 779 aa19.89■□□□□ 0.77
TSPAN4-208ENST00000409531 PPP2R3BQ9Y5P8 575 aa19.89■□□□□ 0.77
TSPAN4-208ENST00000409531 NF2P35240 595 aa19.88■□□□□ 0.77
TSPAN4-208ENST00000409531 APOBEC3HQ6NTF7 200 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-208ENST00000409531 PAXIP1Q6ZW49 1069 aaPredicted RBP19.88■□□□□ 0.77
TSPAN4-208ENST00000409531 RUFY2Q8WXA3 655 aa19.88■□□□□ 0.77
TSPAN4-208ENST00000409531 WDR33Q9C0J8 1336 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-208ENST00000409531 ZNF532Q9HCE3 1301 aa19.87■□□□□ 0.77
TSPAN4-208ENST00000409531 CYP7A1P22680 504 aa19.87■□□□□ 0.77
TSPAN4-208ENST00000409531 CHMLP26374 656 aa19.87■□□□□ 0.77
TSPAN4-208ENST00000409531 TNFAIP1Q13829 316 aa19.87■□□□□ 0.77
TSPAN4-208ENST00000409531 CYP4F22Q6NT55 531 aa19.87■□□□□ 0.77
TSPAN4-208ENST00000409531 APPBP2Q92624 585 aa19.87■□□□□ 0.77
TSPAN4-208ENST00000409531 FAM163AQ96GL9 167 aaPredicted RBP19.87■□□□□ 0.77
TSPAN4-208ENST00000409531 CAPNS2Q96L46 248 aa19.87■□□□□ 0.77
TSPAN4-208ENST00000409531 NOL10Q9BSC4 688 aaKnown RBP19.87■□□□□ 0.77
TSPAN4-208ENST00000409531 MROH7-TTC4A0A0A0MT08 1334 aa19.86■□□□□ 0.77
TSPAN4-208ENST00000409531 TCRBV5S4A2TA0A5A2 114 aa19.86■□□□□ 0.77
TSPAN4-208ENST00000409531 RASA3Q14644 834 aa19.86■□□□□ 0.77
TSPAN4-208ENST00000409531 DIXDC1Q155Q3 683 aa19.86■□□□□ 0.77
TSPAN4-208ENST00000409531 CERS3Q8IU89 383 aa19.86■□□□□ 0.77
TSPAN4-208ENST00000409531 HELLSQ9NRZ9 838 aa19.86■□□□□ 0.77
TSPAN4-208ENST00000409531 RAD50Q92878 1312 aa19.85■□□□□ 0.77
TSPAN4-208ENST00000409531 SUPT20HL1Q3ZLR7 823 aa19.85■□□□□ 0.77
TSPAN4-208ENST00000409531 ZMYM1Q5SVZ6 1142 aa19.85■□□□□ 0.77
TSPAN4-208ENST00000409531 ZNF384Q8TF68 577 aa19.85■□□□□ 0.77
TSPAN4-208ENST00000409531 GAKO14976 1311 aa19.84■□□□□ 0.77
TSPAN4-208ENST00000409531 EIF5BO60841 1220 aaKnown RBP19.84■□□□□ 0.77
TSPAN4-208ENST00000409531 BAG3O95817 575 aa19.84■□□□□ 0.77
TSPAN4-208ENST00000409531 TNNI2P48788 182 aa19.84■□□□□ 0.77
TSPAN4-208ENST00000409531 MFAP1P55081 439 aaKnown RBP19.84■□□□□ 0.77
TSPAN4-208ENST00000409531 GRM1Q13255 1194 aa19.84■□□□□ 0.77
TSPAN4-208ENST00000409531 NMIQ13287 307 aaPredicted RBP19.84■□□□□ 0.77
TSPAN4-208ENST00000409531 FKBP1CQ5VVH2 108 aa19.84■□□□□ 0.77
TSPAN4-208ENST00000409531 RGMBQ6NW40 437 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms