RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 LSG1Q9H089 658 aaKnown RBP26.35■■□□□ 1.81
EPCAM-202ENST00000405271 GAKO14976 1311 aa26.35■■□□□ 1.81
EPCAM-202ENST00000405271 MAGEB6P1A0A0J9YX57 407 aa26.34■■□□□ 1.81
EPCAM-202ENST00000405271 LMOD1P29536 600 aaPredicted RBP26.34■■□□□ 1.81
EPCAM-202ENST00000405271 EPS15P42566 896 aa26.34■■□□□ 1.81
EPCAM-202ENST00000405271 EAPPQ56P03 285 aaPredicted RBP26.34■■□□□ 1.81
EPCAM-202ENST00000405271 CHADLQ6NUI6 762 aa26.34■■□□□ 1.81
EPCAM-202ENST00000405271 PNMA8AQ86V59 439 aaPredicted RBP26.34■■□□□ 1.81
EPCAM-202ENST00000405271 LDHDQ86WU2 507 aa26.34■■□□□ 1.81
EPCAM-202ENST00000405271 CERS3Q8IU89 383 aa26.34■■□□□ 1.81
EPCAM-202ENST00000405271 FAM163AQ96GL9 167 aaPredicted RBP26.34■■□□□ 1.81
EPCAM-202ENST00000405271 MBD4O95243 580 aa26.34■■□□□ 1.81
EPCAM-202ENST00000405271 HDLBPQ00341 1268 aaKnown RBP26.34■■□□□ 1.81
EPCAM-202ENST00000405271 AGBL3Q8NEM8 1001 aa26.34■■□□□ 1.81
EPCAM-202ENST00000405271 NOL10Q9BSC4 688 aaKnown RBP26.34■■□□□ 1.81
EPCAM-202ENST00000405271 SCN4AP35499 1836 aa26.33■■□□□ 1.81
EPCAM-202ENST00000405271 DIXDC1Q155Q3 683 aa26.33■■□□□ 1.81
EPCAM-202ENST00000405271 DSCC1Q9BVC3 393 aa26.33■■□□□ 1.81
EPCAM-202ENST00000405271 USP26Q9BXU7 913 aa26.33■■□□□ 1.81
EPCAM-202ENST00000405271 GPRC5DQ9NZD1 345 aa26.33■■□□□ 1.81
EPCAM-202ENST00000405271 GNAT2P19087 354 aa26.32■■□□□ 1.8
EPCAM-202ENST00000405271 GMPSP49915 693 aaPredicted RBP26.32■■□□□ 1.8
EPCAM-202ENST00000405271 HHIPL2Q6UWX4 724 aa26.32■■□□□ 1.8
EPCAM-202ENST00000405271 KIAA0825Q8IV33 1275 aa26.32■■□□□ 1.8
EPCAM-202ENST00000405271 MIGA1Q8NAN2 632 aa26.32■■□□□ 1.8
EPCAM-202ENST00000405271 RIOK1Q9BRS2 568 aaKnown RBP26.32■■□□□ 1.8
EPCAM-202ENST00000405271 MRIQ9BWK5 157 aa26.32■■□□□ 1.8
EPCAM-202ENST00000405271 RPAP1Q9BWH6 1393 aaPredicted RBP26.31■■□□□ 1.8
EPCAM-202ENST00000405271 F8W031 263 aaPredicted RBP26.31■■□□□ 1.8
EPCAM-202ENST00000405271 TEKT1Q969V4 418 aa26.31■■□□□ 1.8
EPCAM-202ENST00000405271 STRBPQ96SI9 672 aaKnown RBP26.31■■□□□ 1.8
EPCAM-202ENST00000405271 GMLQ99445 158 aa26.31■■□□□ 1.8
EPCAM-202ENST00000405271 BAG3O95817 575 aa26.3■■□□□ 1.8
EPCAM-202ENST00000405271 RPS12P25398 132 aaKnown RBP26.3■■□□□ 1.8
EPCAM-202ENST00000405271 LCORLQ8N3X6 602 aa26.3■■□□□ 1.8
EPCAM-202ENST00000405271 ARMT1Q9H993 441 aa26.3■■□□□ 1.8
EPCAM-202ENST00000405271 CLEC11AQ9Y240 323 aa26.3■■□□□ 1.8
EPCAM-202ENST00000405271 MYH8P13535 1937 aa26.3■■□□□ 1.8
EPCAM-202ENST00000405271 GPR75-ASB3A0A0A6YYF3 556 aa26.29■■□□□ 1.8
EPCAM-202ENST00000405271 MCCP23508 829 aa26.29■■□□□ 1.8
EPCAM-202ENST00000405271 MMP14P50281 582 aa26.29■■□□□ 1.8
EPCAM-202ENST00000405271 PPP4CP60510 307 aa26.29■■□□□ 1.8
EPCAM-202ENST00000405271 PTH1RQ03431 593 aa26.29■■□□□ 1.8
EPCAM-202ENST00000405271 MAP4K1Q92918 833 aa26.29■■□□□ 1.8
EPCAM-202ENST00000405271 C22orf23Q9BZE7 217 aa26.29■■□□□ 1.8
EPCAM-202ENST00000405271 AATFQ9NY61 560 aaKnown RBP eCLIP26.29■■□□□ 1.8
EPCAM-202ENST00000405271 DAGLAQ9Y4D2 1042 aa26.29■■□□□ 1.8
EPCAM-202ENST00000405271 HSPD1P10809 573 aaKnown RBP26.29■■□□□ 1.8
EPCAM-202ENST00000405271 PLCG2P16885 1265 aa26.29■■□□□ 1.8
EPCAM-202ENST00000405271 TBC1D32Q96NH3 1257 aa26.29■■□□□ 1.8
EPCAM-202ENST00000405271 SERPINA10Q9UK55 444 aa26.29■■□□□ 1.8
EPCAM-202ENST00000405271 HDAC9Q9UKV0 1011 aa26.29■■□□□ 1.8
EPCAM-202ENST00000405271 ZBTB12Q9Y330 459 aaPredicted RBP26.29■■□□□ 1.8
EPCAM-202ENST00000405271 BTDP43251 543 aa26.28■■□□□ 1.8
EPCAM-202ENST00000405271 CRKP46108 304 aa26.28■■□□□ 1.8
EPCAM-202ENST00000405271 HTRA3P83110 453 aa26.28■■□□□ 1.8
EPCAM-202ENST00000405271 U3KPZ7 1027 aaPredicted RBP26.28■■□□□ 1.8
EPCAM-202ENST00000405271 ZMYM6O95789 1325 aa26.28■■□□□ 1.8
EPCAM-202ENST00000405271 RBM25P49756 843 aaKnown RBP26.27■■□□□ 1.8
EPCAM-202ENST00000405271 DYNLL1P63167 89 aaKnown RBP26.27■■□□□ 1.8
EPCAM-202ENST00000405271 VPS53Q5VIR6 699 aa26.27■■□□□ 1.8
EPCAM-202ENST00000405271 USP50Q70EL3 339 aaPredicted RBP26.27■■□□□ 1.8
EPCAM-202ENST00000405271 ZDHHC15Q96MV8 337 aa26.27■■□□□ 1.8
EPCAM-202ENST00000405271 CRNKL1Q9BZJ0 848 aaKnown RBP26.27■■□□□ 1.8
EPCAM-202ENST00000405271 ADARB2Q9NS39 739 aaKnown RBP26.26■■□□□ 1.79
EPCAM-202ENST00000405271 CNOT7Q9UIV1 285 aaKnown RBP26.26■■□□□ 1.79
EPCAM-202ENST00000405271 RBM8AQ9Y5S9 174 aaKnown RBP26.26■■□□□ 1.79
EPCAM-202ENST00000405271 ITGBL1O95965 494 aaPredicted RBP26.25■■□□□ 1.79
EPCAM-202ENST00000405271 OGFOD1Q8N543 542 aa26.25■■□□□ 1.79
EPCAM-202ENST00000405271 DNAJC5GQ8N7S2 189 aa26.25■■□□□ 1.79
EPCAM-202ENST00000405271 DPF2Q92785 391 aa26.25■■□□□ 1.79
EPCAM-202ENST00000405271 SLC4A4Q9Y6R1 1079 aa26.25■■□□□ 1.79
EPCAM-202ENST00000405271 FOXP2O15409 715 aa26.24■■□□□ 1.79
EPCAM-202ENST00000405271 USP17L8P0C7I0 530 aa26.24■■□□□ 1.79
EPCAM-202ENST00000405271 HSPA4P34932 840 aa26.24■■□□□ 1.79
EPCAM-202ENST00000405271 MAP1SQ66K74 1059 aaPredicted RBP26.24■■□□□ 1.79
EPCAM-202ENST00000405271 PATL2C9JE40 543 aaKnown RBP26.24■■□□□ 1.79
EPCAM-202ENST00000405271 NACAP1Q9BZK3 213 aa26.24■■□□□ 1.79
EPCAM-202ENST00000405271 TSHZ2Q9NRE2 1034 aa26.24■■□□□ 1.79
EPCAM-202ENST00000405271 CTNNA3Q9UI47 895 aa26.24■■□□□ 1.79
EPCAM-202ENST00000405271 SHTN1A0MZ66 631 aa26.23■■□□□ 1.79
EPCAM-202ENST00000405271 NECTIN1Q15223 517 aa26.23■■□□□ 1.79
EPCAM-202ENST00000405271 ALX1Q15699 326 aa26.23■■□□□ 1.79
EPCAM-202ENST00000405271 GSG1L2A8MUP6 293 aa26.22■■□□□ 1.79
EPCAM-202ENST00000405271 RNF20Q5VTR2 975 aa26.22■■□□□ 1.79
EPCAM-202ENST00000405271 GIMAP6Q6P9H5 292 aa26.22■■□□□ 1.79
EPCAM-202ENST00000405271 MICALL2Q8IY33 904 aa26.22■■□□□ 1.79
EPCAM-202ENST00000405271 PASKQ96RG2 1323 aa26.21■■□□□ 1.79
EPCAM-202ENST00000405271 H7C1D1 291 aa26.21■■□□□ 1.79
EPCAM-202ENST00000405271 APPP05067 770 aa26.21■■□□□ 1.79
EPCAM-202ENST00000405271 RBM5P52756 815 aaKnown RBP eCLIP26.21■■□□□ 1.79
EPCAM-202ENST00000405271 RHBDL3P58872 404 aa26.21■■□□□ 1.79
EPCAM-202ENST00000405271 CFAP100Q494V2 611 aa26.21■■□□□ 1.79
EPCAM-202ENST00000405271 SH3RF3Q8TEJ3 882 aaPredicted RBP26.21■■□□□ 1.79
EPCAM-202ENST00000405271 ATP8A2Q9NTI2 1148 aa26.21■■□□□ 1.79
EPCAM-202ENST00000405271 PRKAB2O43741 272 aa26.2■■□□□ 1.79
EPCAM-202ENST00000405271 HIRAP54198 1017 aaPredicted RBP26.2■■□□□ 1.79
EPCAM-202ENST00000405271 ANAPC15P60006 121 aa26.2■■□□□ 1.79
EPCAM-202ENST00000405271 APOBEC3HQ6NTF7 200 aaKnown RBP26.2■■□□□ 1.79
EPCAM-202ENST00000405271 IFNL3Q8IZI9 196 aa26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms