RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 KANSL2Q9H9L4 492 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 CD248Q9HCU0 757 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 IP6K2Q9UHH9 426 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 KNDC1Q76NI1 1749 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 NAIPQ13075 1403 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 ANKRD50Q9ULJ7 1429 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 TRIM64CA6NLI5 447 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 NRG2O14511 850 aaPredicted RBP4.69□□□□□ -1.66
CLHC1-201ENST00000401408 SCGB1D2O95969 90 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 FOSL1P15407 271 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 NAT1P18440 290 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 PPM1FP49593 454 aaPredicted RBP4.69□□□□□ -1.66
CLHC1-201ENST00000401408 PRELPP51888 382 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 ZNF131P52739 623 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 EPHB1P54762 984 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 RACK1P63244 317 aaKnown RBP4.69□□□□□ -1.66
CLHC1-201ENST00000401408 NFX1Q12986 1120 aaKnown RBP4.69□□□□□ -1.66
CLHC1-201ENST00000401408 TTF1Q15361 905 aaPredicted RBP4.69□□□□□ -1.66
CLHC1-201ENST00000401408 NBPF8Q3BBV2 869 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 ZC3H12AQ5D1E8 599 aaKnown RBP4.69□□□□□ -1.66
CLHC1-201ENST00000401408 ESCO1Q5FWF5 840 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 ARSHQ5FYA8 562 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 NBPF14Q5TI25 921 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 ERAP2Q6P179 960 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 CPXCR1Q8N123 301 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 CABLES1Q8TDN4 633 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 SH3TC2Q8TF17 1288 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 FRS2Q8WU20 508 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 GPR101Q96P66 508 aaPredicted RBP4.69□□□□□ -1.66
CLHC1-201ENST00000401408 DUSP9Q99956 384 aaKnown RBP4.69□□□□□ -1.66
CLHC1-201ENST00000401408 HMX1Q9NP08 348 aaPredicted RBP4.69□□□□□ -1.66
CLHC1-201ENST00000401408 KMT5AQ9NQR1 393 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 NRXN1Q9ULB1 1477 aa4.69□□□□□ -1.66
CLHC1-201ENST00000401408 IFT172Q9UG01 1749 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 PRRT4C9JH25 899 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 HRO43593 1189 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 C21orf2O43822 256 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 DIAPH1O60610 1272 aaKnown RBP4.68□□□□□ -1.66
CLHC1-201ENST00000401408 PIK3CAP42336 1068 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 ARHGAP4P98171 946 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 ECM1Q16610 540 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 ARSIQ5FYB1 569 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 SPECC1Q5M775 1068 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 TMC4Q7Z404 712 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 ZNF654Q8IZM8 581 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 MYO1HQ8N1T3 1032 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 ACRBPQ8NEB7 543 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 PPHLN1Q8NEY8 458 aaKnown RBP4.68□□□□□ -1.66
CLHC1-201ENST00000401408 APPBP2Q92624 585 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 PAIP2Q9BPZ3 127 aaKnown RBP4.68□□□□□ -1.66
CLHC1-201ENST00000401408 SRRTQ9BXP5 876 aaKnown RBP4.68□□□□□ -1.66
CLHC1-201ENST00000401408 LUZP4Q9P127 313 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 DDX41Q9UJV9 622 aaKnown RBP4.68□□□□□ -1.66
CLHC1-201ENST00000401408 ZNF652Q9Y2D9 606 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 SPATA31A1Q5TZJ5 1347 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 USP17L3A6NCW0 530 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 USP17L4A6NCW7 530 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 PLSCR1O15162 318 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 ORC4O43929 436 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 ADCY9O60503 1353 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 NAT2P11245 290 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 ITGAEP38570 1179 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 CLTCL1P53675 1640 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 PAPPAQ13219 1627 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 E2F5Q15329 346 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 XP32Q5T750 250 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 ANO1Q5XXA6 986 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 USP17L2Q6R6M4 530 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 USP17L1Q7RTZ2 530 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 ANKRD42Q8N9B4 389 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 C1orf216Q8TAB5 229 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 SKA1Q96BD8 255 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 SELENOOQ9BVL4 669 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 LGR6Q9HBX8 967 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 GPHNQ9NQX3 736 aaPredicted RBP4.68□□□□□ -1.66
CLHC1-201ENST00000401408 TMEM63CQ9P1W3 806 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 GTF2A1LQ9UNN4 478 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 DAAM1Q9Y4D1 1078 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 PPLO60437 1756 aa4.68□□□□□ -1.66
CLHC1-201ENST00000401408 QSER1Q2KHR3 1735 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 ARHGEF10O15013 1369 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 SHTN1A0MZ66 631 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 GOLGA6L22H0YM25 854 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 PIK3CDO00329 1044 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 IPO5O00410 1097 aaKnown RBP4.67□□□□□ -1.66
CLHC1-201ENST00000401408 LDHBP07195 334 aaKnown RBP4.67□□□□□ -1.66
CLHC1-201ENST00000401408 TPM2P07951 284 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 NAP1L1P55209 391 aaKnown RBP4.67□□□□□ -1.66
CLHC1-201ENST00000401408 MORC3Q14149 939 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 HLTFQ14527 1009 aaKnown RBP eCLIP4.67□□□□□ -1.66
CLHC1-201ENST00000401408 COL13A1Q5TAT6 717 aaPredicted RBP4.67□□□□□ -1.66
CLHC1-201ENST00000401408 TAF3Q5VWG9 929 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 LMBRD2Q68DH5 695 aaPredicted RBP4.67□□□□□ -1.66
CLHC1-201ENST00000401408 DPY19L2Q6NUT2 758 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 NYAP1Q6ZVC0 841 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 KRT28Q7Z3Y7 464 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 PODNQ7Z5L7 613 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 KIAA0907Q7Z7F0 614 aaPredicted RBP4.67□□□□□ -1.66
CLHC1-201ENST00000401408 SPICE1Q8N0Z3 855 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 PAWRQ96IZ0 340 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms