RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 MAGEB6Q8N7X4 407 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 SAMM50Q9Y512 469 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 PCK1P35558 622 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 ADKP55263 362 aaKnown RBP9.7□□□□□ -0.86
CTNND1-205ENST00000399050 OTUD7BQ6GQQ9 843 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 ZKSCAN3Q9BRR0 538 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 STIM2Q9P246 746 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 PEG3Q9GZU2 1588 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 MAP3K5Q99683 1374 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 E7EVH7 732 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 ATP2A1O14983 1001 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 MAP3K9P80192 1104 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 ME3Q16798 604 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 CD109Q6YHK3 1445 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 LMNTD2Q8IXW0 634 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 UTP11Q9Y3A2 253 aaKnown RBP9.7□□□□□ -0.86
CTNND1-205ENST00000399050 EFCAB8A8MWE9 144 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 GNAT2P19087 354 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 CCDC63Q8NA47 563 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 SREK1Q8WXA9 508 aaKnown RBP9.7□□□□□ -0.86
CTNND1-205ENST00000399050 C6orf50Q9HD87 102 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 MAPK8IP1Q9UQF2 711 aa9.7□□□□□ -0.86
CTNND1-205ENST00000399050 ATP5DP30049 168 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 PPFIA1Q13136 1202 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 PAK1Q13153 545 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 POSTNQ15063 836 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 SND1Q7KZF4 910 aaKnown RBP eCLIP9.69□□□□□ -0.86
CTNND1-205ENST00000399050 BICD1Q96G01 975 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 CHAMP1Q96JM3 812 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 DNMT1P26358 1616 aaKnown RBP9.69□□□□□ -0.86
CTNND1-205ENST00000399050 EEF2P13639 858 aaKnown RBP9.69□□□□□ -0.86
CTNND1-205ENST00000399050 PNOCQ13519 176 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 RILPL1Q5EBL4 403 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 KRT79Q5XKE5 535 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 PPFIBP2Q8ND30 876 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 GOLGA5Q8TBA6 731 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 STMN2Q93045 179 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 SLF1Q9BQI6 1058 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 TEX13AQ9BXU3 409 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-205ENST00000399050 NFE2L3Q9Y4A8 694 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 LDHCP07864 332 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 RAPGEF1Q13905 1077 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 NAA16Q6N069 864 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-205ENST00000399050 NKIRAS1Q9NYS0 192 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 IQSEC3Q9UPP2 1182 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-205ENST00000399050 NPC1L1Q9UHC9 1359 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 FANCAO15360 1455 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 SEL1L2Q5TEA6 688 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 NOX5Q96PH1 765 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 RBM28Q9NW13 759 aaKnown RBP9.69□□□□□ -0.86
CTNND1-205ENST00000399050 PNMA6EA0A0J9YXQ4 647 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 NUTM2BA6NNL0 878 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-205ENST00000399050 NUTM2EB1AL46 878 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-205ENST00000399050 CALCOCO2Q13137 446 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 GDAP1L1Q96MZ0 367 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 TAB2Q9NYJ8 693 aa9.69□□□□□ -0.86
CTNND1-205ENST00000399050 CEP85LQ5SZL2 805 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 KIAA1524Q8TCG1 905 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 CABS1Q96KC9 395 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 MTUS1Q9ULD2 1270 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 CAPN7Q9Y6W3 813 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 CCDC152Q4G0S7 254 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 APBB1IPQ7Z5R6 666 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-205ENST00000399050 NUP58Q9BVL2 599 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 PDE4DQ08499 809 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 TRMT44Q8IYL2 757 aaKnown RBP9.68□□□□□ -0.86
CTNND1-205ENST00000399050 ANTXR1Q9H6X2 564 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 PPP2R2CQ9Y2T4 447 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 B4E1Z4 1266 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 GNGT1P63211 74 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 GSTO1P78417 241 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 PAK2Q13177 524 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 DCAF17Q5H9S7 520 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-205ENST00000399050 MIGA1Q8NAN2 632 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 WDR66Q8TBY9 1149 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 PSMB7Q99436 277 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 NAP1L3Q99457 506 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-205ENST00000399050 CIB2O75838 187 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 WHAMMP3Q1A5X7 153 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 RUFY4Q6ZNE9 571 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 RRP36Q96EU6 259 aaKnown RBP9.68□□□□□ -0.86
CTNND1-205ENST00000399050 PUS7Q96PZ0 661 aaKnown RBP9.68□□□□□ -0.86
CTNND1-205ENST00000399050 LAMC3Q9Y6N6 1575 aa9.68□□□□□ -0.86
CTNND1-205ENST00000399050 KRT9P35527 623 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 SV2BQ7L1I2 683 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 ATP6V0A2Q9Y487 856 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 DEXIO95424 95 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 CDC25BP30305 580 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 ASIC2Q16515 512 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 TNNI3KQ59H18 835 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 LRRC45Q96CN5 670 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 MYCBPQ99417 103 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-205ENST00000399050 FERMT1Q9BQL6 677 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 SYNCQ9H7C4 482 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 NRBP1Q9UHY1 535 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 FPGT-TNNI3KV9GXZ4 949 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 KDM5AP29375 1690 aaKnown RBP9.67□□□□□ -0.86
CTNND1-205ENST00000399050 GIGYF1O75420 1035 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-205ENST00000399050 KLHL7Q8IXQ5 586 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 CSGALNACT2Q8N6G5 542 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms