RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 HMMRO75330 724 aa10.31□□□□□ -0.76
BRCC3-205ENST00000399026 FRAT2O75474 233 aaPredicted RBP10.31□□□□□ -0.76
BRCC3-205ENST00000399026 TIMM10P62072 90 aa10.31□□□□□ -0.76
BRCC3-205ENST00000399026 E2F4Q16254 413 aa10.31□□□□□ -0.76
BRCC3-205ENST00000399026 KIF4BQ2VIQ3 1234 aa10.31□□□□□ -0.76
BRCC3-205ENST00000399026 MAP1SQ66K74 1059 aaPredicted RBP10.31□□□□□ -0.76
BRCC3-205ENST00000399026 LDHDQ86WU2 507 aa10.31□□□□□ -0.76
BRCC3-205ENST00000399026 RPAP2Q8IXW5 612 aaPredicted RBP10.31□□□□□ -0.76
BRCC3-205ENST00000399026 SMC1BQ8NDV3 1235 aa10.31□□□□□ -0.76
BRCC3-205ENST00000399026 AGBL3Q8NEM8 1001 aa10.31□□□□□ -0.76
BRCC3-205ENST00000399026 TDRD7Q8NHU6 1098 aaKnown RBP10.31□□□□□ -0.76
BRCC3-205ENST00000399026 DPF2Q92785 391 aa10.31□□□□□ -0.76
BRCC3-205ENST00000399026 XAGE2Q96GT9 111 aa10.31□□□□□ -0.76
BRCC3-205ENST00000399026 NEUROD6Q96NK8 337 aa10.31□□□□□ -0.76
BRCC3-205ENST00000399026 GMLQ99445 158 aa10.31□□□□□ -0.76
BRCC3-205ENST00000399026 TLR7Q9NYK1 1049 aaKnown RBP10.31□□□□□ -0.76
BRCC3-205ENST00000399026 HCSTQ9UBK5 93 aa10.31□□□□□ -0.76
BRCC3-205ENST00000399026 ASTN2O75129 1339 aaPredicted RBP10.31□□□□□ -0.76
BRCC3-205ENST00000399026 MYO3BQ8WXR4 1341 aa10.31□□□□□ -0.76
BRCC3-205ENST00000399026 H7C1D1 291 aa10.3□□□□□ -0.76
BRCC3-205ENST00000399026 USP17L8P0C7I0 530 aa10.3□□□□□ -0.76
BRCC3-205ENST00000399026 HIRAP54198 1017 aaPredicted RBP10.3□□□□□ -0.76
BRCC3-205ENST00000399026 GRIK5Q16478 980 aa10.3□□□□□ -0.76
BRCC3-205ENST00000399026 TNNI3KQ59H18 835 aa10.3□□□□□ -0.76
BRCC3-205ENST00000399026 MFSD14BQ5SR56 506 aa10.3□□□□□ -0.76
BRCC3-205ENST00000399026 CCDC102BQ68D86 513 aa10.3□□□□□ -0.76
BRCC3-205ENST00000399026 USP50Q70EL3 339 aaPredicted RBP10.3□□□□□ -0.76
BRCC3-205ENST00000399026 PNMA8AQ86V59 439 aaPredicted RBP10.3□□□□□ -0.76
BRCC3-205ENST00000399026 EXOC6Q8TAG9 804 aa10.3□□□□□ -0.76
BRCC3-205ENST00000399026 IL1RAPL2Q9NP60 686 aa10.3□□□□□ -0.76
BRCC3-205ENST00000399026 AKAP2Q9Y2D5 859 aa10.3□□□□□ -0.76
BRCC3-205ENST00000399026 NOP58Q9Y2X3 529 aaKnown RBP10.3□□□□□ -0.76
BRCC3-205ENST00000399026 FPGT-TNNI3KV9GXZ4 949 aa10.3□□□□□ -0.76
BRCC3-205ENST00000399026 FAM205AQ6ZU69 1335 aa10.3□□□□□ -0.76
BRCC3-205ENST00000399026 COL9A1P20849 921 aa10.29□□□□□ -0.76
BRCC3-205ENST00000399026 ZNF280AP59817 542 aaPredicted RBP10.29□□□□□ -0.76
BRCC3-205ENST00000399026 PI16Q6UXB8 463 aa10.29□□□□□ -0.76
BRCC3-205ENST00000399026 KCTD12Q96CX2 325 aaKnown RBP10.29□□□□□ -0.76
BRCC3-205ENST00000399026 EPAS1Q99814 870 aa10.29□□□□□ -0.76
BRCC3-205ENST00000399026 DBNDD2Q9BQY9 259 aa10.29□□□□□ -0.76
BRCC3-205ENST00000399026 MYOZ2Q9NPC6 264 aa10.29□□□□□ -0.76
BRCC3-205ENST00000399026 WDR70Q9NW82 654 aa10.29□□□□□ -0.76
BRCC3-205ENST00000399026 GGA3Q9NZ52 723 aa10.29□□□□□ -0.76
BRCC3-205ENST00000399026 PCDHB15Q9Y5E8 787 aa10.29□□□□□ -0.76
BRCC3-205ENST00000399026 PCDHAC2Q9Y5I4 1007 aa10.29□□□□□ -0.76
BRCC3-205ENST00000399026 TRPM7Q96QT4 1865 aa10.29□□□□□ -0.76
BRCC3-205ENST00000399026 MYO5AQ9Y4I1 1855 aaKnown RBP10.29□□□□□ -0.76
BRCC3-205ENST00000399026 AKAP11Q9UKA4 1901 aa10.29□□□□□ -0.76
BRCC3-205ENST00000399026 FMR1Q06787 632 aaKnown RBP eCLIP10.28□□□□□ -0.76
BRCC3-205ENST00000399026 FSTL1Q12841 308 aa10.28□□□□□ -0.76
BRCC3-205ENST00000399026 RASGRF1Q13972 1273 aa10.28□□□□□ -0.76
BRCC3-205ENST00000399026 GORABQ5T7V8 394 aa10.28□□□□□ -0.76
BRCC3-205ENST00000399026 AACSQ86V21 672 aa10.28□□□□□ -0.76
BRCC3-205ENST00000399026 ERC1Q8IUD2 1116 aa10.28□□□□□ -0.76
BRCC3-205ENST00000399026 RHPN1Q8TCX5 695 aa10.28□□□□□ -0.76
BRCC3-205ENST00000399026 DDX12PQ92771 950 aa10.28□□□□□ -0.76
BRCC3-205ENST00000399026 CCDC8Q9H0W5 538 aaPredicted RBP10.28□□□□□ -0.76
BRCC3-205ENST00000399026 DBNLQ9UJU6 430 aaKnown RBP10.28□□□□□ -0.76
BRCC3-205ENST00000399026 SCAF8Q9UPN6 1271 aaKnown RBP10.28□□□□□ -0.76
BRCC3-205ENST00000399026 AOX1Q06278 1338 aa10.28□□□□□ -0.76
BRCC3-205ENST00000399026 DOCK2Q92608 1830 aa10.28□□□□□ -0.76
BRCC3-205ENST00000399026 POLR2AP24928 1970 aaKnown RBP10.27□□□□□ -0.77
BRCC3-205ENST00000399026 PPP1R3GB7ZBB8 358 aa10.27□□□□□ -0.77
BRCC3-205ENST00000399026 ADM5C9JUS6 153 aa10.27□□□□□ -0.77
BRCC3-205ENST00000399026 TRAF5O00463 557 aa10.27□□□□□ -0.77
BRCC3-205ENST00000399026 SMARCA5O60264 1052 aaPredicted RBP10.27□□□□□ -0.77
BRCC3-205ENST00000399026 HTRA3P83110 453 aa10.27□□□□□ -0.77
BRCC3-205ENST00000399026 SCARF1Q14162 830 aa10.27□□□□□ -0.77
BRCC3-205ENST00000399026 NBPF9Q3BBW0 867 aa10.27□□□□□ -0.77
BRCC3-205ENST00000399026 TTC39AQ5SRH9 613 aa10.27□□□□□ -0.77
BRCC3-205ENST00000399026 C6orf132Q5T0Z8 1188 aa10.27□□□□□ -0.77
BRCC3-205ENST00000399026 DLK2Q6UY11 383 aa10.27□□□□□ -0.77
BRCC3-205ENST00000399026 EAF2Q96CJ1 260 aaPredicted RBP10.27□□□□□ -0.77
BRCC3-205ENST00000399026 GLIS2Q9BZE0 524 aaPredicted RBP10.27□□□□□ -0.77
BRCC3-205ENST00000399026 GPR108Q9NPR9 543 aa10.27□□□□□ -0.77
BRCC3-205ENST00000399026 GNL3LQ9NVN8 582 aaKnown RBP10.27□□□□□ -0.77
BRCC3-205ENST00000399026 HDAC9Q9UKV0 1011 aa10.27□□□□□ -0.77
BRCC3-205ENST00000399026 TTF2Q9UNY4 1162 aaKnown RBP10.27□□□□□ -0.77
BRCC3-205ENST00000399026 ARID4AP29374 1257 aaPredicted RBP10.26□□□□□ -0.77
BRCC3-205ENST00000399026 PRDX5P30044 214 aa10.26□□□□□ -0.77
BRCC3-205ENST00000399026 MCAMP43121 646 aa10.26□□□□□ -0.77
BRCC3-205ENST00000399026 RBM5P52756 815 aaKnown RBP eCLIP10.26□□□□□ -0.77
BRCC3-205ENST00000399026 FKBP1AP62942 108 aaKnown RBP10.26□□□□□ -0.77
BRCC3-205ENST00000399026 CFAP100Q494V2 611 aa10.26□□□□□ -0.77
BRCC3-205ENST00000399026 HSP90AB4PQ58FF6 505 aa10.26□□□□□ -0.77
BRCC3-205ENST00000399026 ANGEL2Q5VTE6 544 aaKnown RBP10.26□□□□□ -0.77
BRCC3-205ENST00000399026 CNTROBQ8N137 903 aa10.26□□□□□ -0.77
BRCC3-205ENST00000399026 OGFOD1Q8N543 542 aa10.26□□□□□ -0.77
BRCC3-205ENST00000399026 TBC1D22AQ8WUA7 517 aa10.26□□□□□ -0.77
BRCC3-205ENST00000399026 KIF1BPQ96EK5 621 aa10.26□□□□□ -0.77
BRCC3-205ENST00000399026 DENND2AQ9ULE3 1009 aa10.26□□□□□ -0.77
BRCC3-205ENST00000399026 MYH2Q9UKX2 1941 aa10.26□□□□□ -0.77
BRCC3-205ENST00000399026 PASKQ96RG2 1323 aa10.26□□□□□ -0.77
BRCC3-205ENST00000399026 CLRN2A0PK11 232 aa10.25□□□□□ -0.77
BRCC3-205ENST00000399026 SPDYE16A6NNV3 312 aaPredicted RBP10.25□□□□□ -0.77
BRCC3-205ENST00000399026 WNT10BO00744 389 aa10.25□□□□□ -0.77
BRCC3-205ENST00000399026 HSPA6P17066 643 aa10.25□□□□□ -0.77
BRCC3-205ENST00000399026 TSHZ2Q9NRE2 1034 aa10.25□□□□□ -0.77
BRCC3-205ENST00000399026 SNRKQ9NRH2 765 aa10.25□□□□□ -0.77
BRCC3-205ENST00000399026 HMG20BQ9P0W2 317 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms