RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 HIP1O00291 1037 aa10.11□□□□□ -0.79
RTN4-206ENST00000394611 ENC1O14682 589 aa10.11□□□□□ -0.79
RTN4-206ENST00000394611 ECM2O94769 699 aaPredicted RBP10.11□□□□□ -0.79
RTN4-206ENST00000394611 IFIT1P09914 478 aaKnown RBP10.11□□□□□ -0.79
RTN4-206ENST00000394611 PROSER3Q2NL68 480 aa10.11□□□□□ -0.79
RTN4-206ENST00000394611 ZNF772Q68DY9 489 aaPredicted RBP10.11□□□□□ -0.79
RTN4-206ENST00000394611 KIAA1328Q86T90 577 aa10.11□□□□□ -0.79
RTN4-206ENST00000394611 CEP57Q86XR8 500 aa10.11□□□□□ -0.79
RTN4-206ENST00000394611 SLC26A6Q9BXS9 759 aa10.11□□□□□ -0.79
RTN4-206ENST00000394611 GOLPH3LQ9H4A5 285 aa10.11□□□□□ -0.79
RTN4-206ENST00000394611 FANCLQ9NW38 375 aa10.11□□□□□ -0.79
RTN4-206ENST00000394611 GLI3P10071 1580 aa10.11□□□□□ -0.79
RTN4-206ENST00000394611 RBM6P78332 1123 aaKnown RBP10.11□□□□□ -0.79
RTN4-206ENST00000394611 TTC39AQ5SRH9 613 aa10.11□□□□□ -0.79
RTN4-206ENST00000394611 POTEAQ6S8J7 498 aa10.11□□□□□ -0.79
RTN4-206ENST00000394611 CCDC150Q8NCX0 1101 aa10.11□□□□□ -0.79
RTN4-206ENST00000394611 ANKRD7Q92527 254 aa10.11□□□□□ -0.79
RTN4-206ENST00000394611 BAG1Q99933 345 aaPredicted RBP10.11□□□□□ -0.79
RTN4-206ENST00000394611 DHX58Q96C10 678 aa10.1□□□□□ -0.79
RTN4-206ENST00000394611 ZNF594Q96JF6 807 aaPredicted RBP10.1□□□□□ -0.79
RTN4-206ENST00000394611 FAN1Q9Y2M0 1017 aa10.1□□□□□ -0.79
RTN4-206ENST00000394611 MYO1CO00159 1063 aa10.1□□□□□ -0.79
RTN4-206ENST00000394611 ZNF202O95125 648 aa10.1□□□□□ -0.79
RTN4-206ENST00000394611 SCRN1Q12765 414 aa10.1□□□□□ -0.79
RTN4-206ENST00000394611 PLEKHO1Q53GL0 409 aaPredicted RBP10.1□□□□□ -0.79
RTN4-206ENST00000394611 ACBD3Q9H3P7 528 aa10.1□□□□□ -0.79
RTN4-206ENST00000394611 CBFA2T2O43439 604 aa10.1□□□□□ -0.79
RTN4-206ENST00000394611 ETF1P62495 437 aaKnown RBP10.1□□□□□ -0.79
RTN4-206ENST00000394611 SMYD4Q8IYR2 804 aaPredicted RBP10.1□□□□□ -0.79
RTN4-206ENST00000394611 PCDHA7Q9UN72 937 aa10.1□□□□□ -0.79
RTN4-206ENST00000394611 LOC102724159A0A0B4J2E5 919 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 CTAGE5O15320 804 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 KIAA0754O94854 1291 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 KRT32Q14532 448 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 PWP2Q15269 919 aaKnown RBP10.09□□□□□ -0.79
RTN4-206ENST00000394611 FILIP1LQ4L180 1135 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 GSPT2Q8IYD1 628 aaKnown RBP10.09□□□□□ -0.79
RTN4-206ENST00000394611 ZCRB1Q8TBF4 217 aaKnown RBP10.09□□□□□ -0.79
RTN4-206ENST00000394611 GOLGA1Q92805 767 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 VPS16Q9H269 839 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 THRAP3Q9Y2W1 955 aaKnown RBP10.09□□□□□ -0.79
RTN4-206ENST00000394611 CASP1P29466 404 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 KCTD19Q17RG1 926 aaPredicted RBP10.09□□□□□ -0.79
RTN4-206ENST00000394611 SUCLG2Q96I99 432 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 TTC41PQ6P2S7 1318 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 DISP2A7MBM2 1401 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 TCHHQ07283 1943 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 A0A0G2JLW4 131 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 MINDY4BA8MYZ0 360 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 CCP110O43303 1012 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 CHMP4BP1P59074 171 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 ATP2B2Q01814 1243 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 BARGINQ6ZT62 677 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 COPS6Q7L5N1 327 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 ALG1Q9BT22 464 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 RRP15Q9Y3B9 282 aaKnown RBP10.09□□□□□ -0.79
RTN4-206ENST00000394611 OVOS2A0A0G2JMS6 1433 aa10.09□□□□□ -0.79
RTN4-206ENST00000394611 CYP27B1O15528 508 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 EIF5P55010 431 aaKnown RBP10.08□□□□□ -0.8
RTN4-206ENST00000394611 ODF2Q5BJF6 829 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 FAM182BQ5T319 152 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 UIMC1Q96RL1 719 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 HDAC5Q9UQL6 1122 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 NFE2L3Q9Y4A8 694 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 SAMM50Q9Y512 469 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 DLG5Q8TDM6 1919 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 EXOC5O00471 708 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 N4BP3O15049 544 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 DDB1Q16531 1140 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 CCDC181Q5TID7 509 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 LMBR1LQ6UX01 489 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 ANKRD20A12PQ8NF67 263 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 TDRD7Q8NHU6 1098 aaKnown RBP10.08□□□□□ -0.8
RTN4-206ENST00000394611 LCMT1Q9UIC8 334 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 MACROD2A1Z1Q3 448 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 DHX16O60231 1041 aaKnown RBP10.08□□□□□ -0.8
RTN4-206ENST00000394611 MTF1Q14872 753 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 CCDC70Q6NSX1 233 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 PI4K2BQ8TCG2 481 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 XAGE3Q8WTP9 111 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 PARD6BQ9BYG5 372 aa10.08□□□□□ -0.8
RTN4-206ENST00000394611 PARP4Q9UKK3 1724 aaKnown RBP10.08□□□□□ -0.8
RTN4-206ENST00000394611 AMOTQ4VCS5 1084 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 SAMD1Q6SPF0 538 aaPredicted RBP10.07□□□□□ -0.8
RTN4-206ENST00000394611 TAX1BP1Q86VP1 789 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 SEPT12Q8IYM1 358 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 DPF2Q92785 391 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 SLF1Q9BQI6 1058 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 ZSCAN16Q9H4T2 348 aaPredicted RBP10.07□□□□□ -0.8
RTN4-206ENST00000394611 ZSWIM6Q9HCJ5 1215 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 U3KPZ7 1027 aaPredicted RBP10.07□□□□□ -0.8
RTN4-206ENST00000394611 WNK3Q9BYP7 1800 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 GRM8O00222 908 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 N4BP1O75113 896 aaKnown RBP10.07□□□□□ -0.8
RTN4-206ENST00000394611 GPTP24298 496 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 ATP1A2P50993 1020 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 CCDC102BQ68D86 513 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 JMYQ8N9B5 988 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 IL17REQ8NFR9 667 aa10.07□□□□□ -0.8
RTN4-206ENST00000394611 ADD1P35611 737 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms