RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 JAKMIP3Q5VZ66 844 aa6.52□□□□□ -1.36
RFFL-202ENST00000394597 FERMT3Q86UX7 667 aa6.52□□□□□ -1.36
RFFL-202ENST00000394597 TMTC2Q8N394 836 aa6.52□□□□□ -1.36
RFFL-202ENST00000394597 NECAB1Q8N987 351 aa6.52□□□□□ -1.36
RFFL-202ENST00000394597 JMYQ8N9B5 988 aa6.52□□□□□ -1.36
RFFL-202ENST00000394597 GPT2Q8TD30 523 aa6.52□□□□□ -1.36
RFFL-202ENST00000394597 INTS4Q96HW7 963 aaKnown RBP6.52□□□□□ -1.36
RFFL-202ENST00000394597 SPATA32Q96LK8 384 aa6.52□□□□□ -1.36
RFFL-202ENST00000394597 TLR7Q9NYK1 1049 aaKnown RBP6.52□□□□□ -1.36
RFFL-202ENST00000394597 ZNF215Q9UL58 517 aaPredicted RBP6.52□□□□□ -1.36
RFFL-202ENST00000394597 JRKLQ9Y4A0 524 aa6.52□□□□□ -1.36
RFFL-202ENST00000394597 COL5A2P05997 1499 aaPredicted RBP6.52□□□□□ -1.37
RFFL-202ENST00000394597 NF2P35240 595 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 LRRC2Q9BYS8 371 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 PXDNLA1KZ92 1463 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 SHTN1A0MZ66 631 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 GOLGA8AA7E2F4 631 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 LDHBP07195 334 aaKnown RBP6.52□□□□□ -1.37
RFFL-202ENST00000394597 RAD51AP2Q09MP3 1159 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 IKQ13123 557 aaPredicted RBP6.52□□□□□ -1.37
RFFL-202ENST00000394597 DHX8Q14562 1220 aaKnown RBP6.52□□□□□ -1.37
RFFL-202ENST00000394597 CCDC102BQ68D86 513 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 GBP6Q6ZN66 633 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 MIGA1Q8NAN2 632 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 RGS22Q8NE09 1264 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 C8orf76Q96K31 380 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 EYA3Q99504 573 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 GGA1Q9UJY5 639 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 CDHR2Q9BYE9 1310 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 KLF18A0A0U1RQI7 1052 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 GPAA1O43292 621 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 CHRNDQ07001 517 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 E2F4Q16254 413 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 ERFEQ4G0M1 354 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 CATIPQ7Z7H3 387 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 NLGN1Q8N2Q7 840 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 CTCFLQ8NI51 663 aaPredicted RBP6.52□□□□□ -1.37
RFFL-202ENST00000394597 PI4K2BQ8TCG2 481 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 ESR2Q92731 530 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 NARFQ9UHQ1 456 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 PYCARDQ9ULZ3 195 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 CNPY2Q9Y2B0 182 aa6.52□□□□□ -1.37
RFFL-202ENST00000394597 PLEKHG2Q9H7P9 1386 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 PXDNQ92626 1479 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 KDM6AO15550 1401 aaPredicted RBP6.51□□□□□ -1.37
RFFL-202ENST00000394597 PRC1O43663 620 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 UFL1O94874 794 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 MBD4O95243 580 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 ME1P48163 572 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 SSRP1Q08945 709 aaKnown RBP6.51□□□□□ -1.37
RFFL-202ENST00000394597 NCBP1Q09161 790 aaKnown RBP6.51□□□□□ -1.37
RFFL-202ENST00000394597 CEP57L1Q8IYX8 460 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 ZNF710Q8N1W2 664 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 PLCD4Q9BRC7 762 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 TM6SF1Q9BZW5 370 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 SEC31BQ9NQW1 1179 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 VPS18Q9P253 973 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 BCCIPQ9P287 314 aaKnown RBP eCLIP6.51□□□□□ -1.37
RFFL-202ENST00000394597 DNAI1Q9UI46 699 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 PIK3C2AO00443 1686 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.51□□□□□ -1.37
RFFL-202ENST00000394597 TSPY2A6NKD2 308 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 RIMBP2O15034 1052 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 RPS6KB1P23443 525 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 ADORA1P30542 326 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 METAP2P50579 478 aaKnown RBP eCLIP6.51□□□□□ -1.37
RFFL-202ENST00000394597 FOXO4P98177 505 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 PKP1Q13835 747 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 UBE4AQ14139 1066 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 WTAPQ15007 396 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 RABL6Q3YEC7 729 aaPredicted RBP6.51□□□□□ -1.37
RFFL-202ENST00000394597 SYT10Q6XYQ8 523 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 CRACR2BQ8N4Y2 399 aaPredicted RBP6.51□□□□□ -1.37
RFFL-202ENST00000394597 WDR66Q8TBY9 1149 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 KIAA1524Q8TCG1 905 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 DSCC1Q9BVC3 393 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 SCAND2PQ9GZW5 306 aaPredicted RBP6.51□□□□□ -1.37
RFFL-202ENST00000394597 SRP68Q9UHB9 627 aaKnown RBP6.51□□□□□ -1.37
RFFL-202ENST00000394597 A0A0D9SFI3 127 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 MYO1CO00159 1063 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 MYCNP04198 464 aaPredicted RBP6.51□□□□□ -1.37
RFFL-202ENST00000394597 CPA1P15085 419 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 ALDH1B1P30837 517 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 IARSP41252 1262 aaKnown RBP6.51□□□□□ -1.37
RFFL-202ENST00000394597 EIF5P55010 431 aaKnown RBP6.51□□□□□ -1.37
RFFL-202ENST00000394597 RBM6P78332 1123 aaKnown RBP6.51□□□□□ -1.37
RFFL-202ENST00000394597 PTH1RQ03431 593 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 TICAM2Q86XR7 235 aa6.51□□□□□ -1.37
RFFL-202ENST00000394597 ORC3Q9UBD5 711 aaPredicted RBP6.51□□□□□ -1.37
RFFL-202ENST00000394597 ZNF532Q9HCE3 1301 aa6.5□□□□□ -1.37
RFFL-202ENST00000394597 ZSCAN22P10073 491 aaPredicted RBP6.5□□□□□ -1.37
RFFL-202ENST00000394597 PLCG2P16885 1265 aa6.5□□□□□ -1.37
RFFL-202ENST00000394597 OAS2P29728 719 aaKnown RBP6.5□□□□□ -1.37
RFFL-202ENST00000394597 DDIT3P35638 169 aa6.5□□□□□ -1.37
RFFL-202ENST00000394597 BCAMP50895 628 aa6.5□□□□□ -1.37
RFFL-202ENST00000394597 GSDMDP57764 484 aa6.5□□□□□ -1.37
RFFL-202ENST00000394597 ANO6Q4KMQ2 910 aa6.5□□□□□ -1.37
RFFL-202ENST00000394597 SOGA3Q5TF21 947 aa6.5□□□□□ -1.37
RFFL-202ENST00000394597 LRCH2Q5VUJ6 765 aa6.5□□□□□ -1.37
RFFL-202ENST00000394597 CHAMP1Q96JM3 812 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms