RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 B4E1Z4 1266 aa10.07□□□□□ -0.8
GAPVD1-204ENST00000394083 PUM3Q15397 648 aaKnown RBP10.07□□□□□ -0.8
GAPVD1-204ENST00000394083 LRSAM1Q6UWE0 723 aa10.07□□□□□ -0.8
GAPVD1-204ENST00000394083 LPIN2Q92539 896 aa10.07□□□□□ -0.8
GAPVD1-204ENST00000394083 PHKBQ93100 1093 aa10.07□□□□□ -0.8
GAPVD1-204ENST00000394083 RPS6KA4O75676 772 aa10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 PRR5LQ6MZQ0 368 aa10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 MPNDQ8N594 471 aa10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 ZKSCAN3Q9BRR0 538 aa10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 TEX13AQ9BXU3 409 aaPredicted RBP10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 ANO8Q9HCE9 1232 aaPredicted RBP10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 DDX49Q9Y6V7 483 aaKnown RBP10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 PTPDC1A2A3K4 754 aa10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 NUCB2P80303 420 aa10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 GUCY1B3Q02153 619 aa10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 C17orf53Q8N3J3 647 aaPredicted RBP10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 POLLQ9UGP5 575 aa10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 CERS5Q8N5B7 392 aa10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 MAGEB6Q8N7X4 407 aa10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 TNFRSF25Q93038 417 aa10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 MXD3Q9BW11 206 aa10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 TFCP2L1Q9NZI6 479 aa10.06□□□□□ -0.8
GAPVD1-204ENST00000394083 POLRMTO00411 1230 aaKnown RBP10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 BLOC1S2Q6QNY1 142 aa10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 KIF6Q6ZMV9 814 aa10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 FAM196AQ6ZSG2 479 aa10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 IFNL3Q8IZI9 196 aa10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 UBE3CQ15386 1083 aa10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 IL17AQ16552 155 aa10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 CLEC4GQ6UXB4 293 aa10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 USP49Q70CQ1 688 aa10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 SEPT12Q8IYM1 358 aa10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 AKT1S1Q96B36 256 aa10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 UTP14AQ9BVJ6 771 aaKnown RBP10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 BSDC1Q9NW68 430 aaPredicted RBP10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 CEP126Q9P2H0 1117 aa10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 FIBPO43427 364 aa10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 BICDL1Q6ZP65 573 aa10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 OXER1Q8TDS5 423 aa10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 ZMYM6O95789 1325 aa10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 APOA5Q6Q788 366 aa10.05□□□□□ -0.8
GAPVD1-204ENST00000394083 MROH5Q6ZUA9 1318 aa10.04□□□□□ -0.8
GAPVD1-204ENST00000394083 RC3H1Q5TC82 1133 aaKnown RBP10.04□□□□□ -0.8
GAPVD1-204ENST00000394083 ANKRD18BA2A2Z9 1011 aa10.04□□□□□ -0.8
GAPVD1-204ENST00000394083 FOXN1O15353 648 aa10.04□□□□□ -0.8
GAPVD1-204ENST00000394083 MBD4O95243 580 aa10.04□□□□□ -0.8
GAPVD1-204ENST00000394083 FOSBP53539 338 aa10.04□□□□□ -0.8
GAPVD1-204ENST00000394083 PNPLA7Q6ZV29 1317 aa10.04□□□□□ -0.8
GAPVD1-204ENST00000394083 C11orf57Q6ZUT1 292 aaPredicted RBP10.04□□□□□ -0.8
GAPVD1-204ENST00000394083 DOCK5Q9H7D0 1870 aa10.04□□□□□ -0.8
GAPVD1-204ENST00000394083 M0R2N6 131 aa10.04□□□□□ -0.8
GAPVD1-204ENST00000394083 GNPATO15228 680 aa10.04□□□□□ -0.8
GAPVD1-204ENST00000394083 MCM2P49736 904 aa10.04□□□□□ -0.8
GAPVD1-204ENST00000394083 CTR9Q6PD62 1173 aa10.04□□□□□ -0.8
GAPVD1-204ENST00000394083 CERKQ8TCT0 537 aa10.04□□□□□ -0.8
GAPVD1-204ENST00000394083 NGLY1Q96IV0 654 aa10.04□□□□□ -0.8
GAPVD1-204ENST00000394083 MTRQ99707 1265 aa10.04□□□□□ -0.8
GAPVD1-204ENST00000394083 ELP1O95163 1332 aa10.03□□□□□ -0.8
GAPVD1-204ENST00000394083 JAG1P78504 1218 aa10.03□□□□□ -0.8
GAPVD1-204ENST00000394083 MECOMQ03112 1051 aa10.03□□□□□ -0.8
GAPVD1-204ENST00000394083 IQCB1Q15051 598 aa10.03□□□□□ -0.8
GAPVD1-204ENST00000394083 RNF214Q8ND24 703 aa10.03□□□□□ -0.8
GAPVD1-204ENST00000394083 POLR2AP24928 1970 aaKnown RBP10.03□□□□□ -0.8
GAPVD1-204ENST00000394083 STK11IPQ8N1F8 1099 aa10.03□□□□□ -0.8
GAPVD1-204ENST00000394083 COL11A1P12107 1806 aaPredicted RBP10.03□□□□□ -0.8
GAPVD1-204ENST00000394083 SPATA31A6Q5VVP1 1343 aa10.03□□□□□ -0.8
GAPVD1-204ENST00000394083 CYTH3O43739 400 aa10.03□□□□□ -0.8
GAPVD1-204ENST00000394083 hCG_1642624A0A1W2PR95 340 aa10.02□□□□□ -0.8
GAPVD1-204ENST00000394083 PLCD1P51178 756 aa10.02□□□□□ -0.8
GAPVD1-204ENST00000394083 TROAPQ12815 778 aa10.02□□□□□ -0.8
GAPVD1-204ENST00000394083 CCDC144CPQ8IYA2 1237 aa10.02□□□□□ -0.8
GAPVD1-204ENST00000394083 ZNFX1Q9P2E3 1918 aaKnown RBP10.02□□□□□ -0.8
GAPVD1-204ENST00000394083 ARID5BQ14865 1188 aa10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 ALX1Q15699 326 aa10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 SGMS1Q86VZ5 419 aa10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 ENAHQ8N8S7 591 aaPredicted RBP10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 AK7Q96M32 723 aa10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 ZNF830Q96NB3 372 aaPredicted RBP10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 U3KPZ7 1027 aaPredicted RBP10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 PRC1O43663 620 aa10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 CASC1Q6TDU7 716 aa10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 SLC44A5Q8NCS7 719 aa10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 ZNF274Q96GC6 653 aaPredicted RBP10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 RHBDL3P58872 404 aa10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 DIXDC1Q155Q3 683 aa10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 SHC4Q6S5L8 630 aa10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 FMR1NBQ8N0W7 255 aaPredicted RBP10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 P2RX7Q99572 595 aaKnown RBP10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 CDCA7Q9BWT1 371 aaPredicted RBP10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 NRBP1Q9UHY1 535 aa10.02□□□□□ -0.81
GAPVD1-204ENST00000394083 GPSM2P81274 684 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 MDM2Q00987 491 aaPredicted RBP10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 SBF1O95248 1867 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 PHF14O94880 888 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 NCAPHQ15003 741 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 CCDC144BQ3MJ40 725 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 RCOR1Q9UKL0 485 aa10.01□□□□□ -0.81
GAPVD1-204ENST00000394083 WDR33Q9C0J8 1336 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms