RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 GSG1L2A8MUP6 293 aa29.01■■■□□ 2.24
LRFN4-202ENST00000393952 BAG3O95817 575 aa29.01■■■□□ 2.24
LRFN4-202ENST00000393952 HHIPL2Q6UWX4 724 aa29.01■■■□□ 2.24
LRFN4-202ENST00000393952 EPB41L4AQ9HCS5 686 aaPredicted RBP29.01■■■□□ 2.24
LRFN4-202ENST00000393952 ZNF541Q9H0D2 1346 aa29.01■■■□□ 2.23
LRFN4-202ENST00000393952 HDLBPQ00341 1268 aaKnown RBP29.01■■■□□ 2.23
LRFN4-202ENST00000393952 CREB3L3Q68CJ9 461 aa29.01■■■□□ 2.23
LRFN4-202ENST00000393952 AGBL3Q8NEM8 1001 aa29.01■■■□□ 2.23
LRFN4-202ENST00000393952 SH3RF3Q8TEJ3 882 aaPredicted RBP29.01■■■□□ 2.23
LRFN4-202ENST00000393952 SDR42E1Q8WUS8 393 aa29.01■■■□□ 2.23
LRFN4-202ENST00000393952 FGAP02671 866 aa29■■■□□ 2.23
LRFN4-202ENST00000393952 KIF2CQ99661 725 aa29■■■□□ 2.23
LRFN4-202ENST00000393952 MRIQ9BWK5 157 aa29■■■□□ 2.23
LRFN4-202ENST00000393952 CRNKL1Q9BZJ0 848 aaKnown RBP29■■■□□ 2.23
LRFN4-202ENST00000393952 RNF181Q9P0P0 153 aa29■■■□□ 2.23
LRFN4-202ENST00000393952 TIAM2Q8IVF5 1701 aa29■■■□□ 2.23
LRFN4-202ENST00000393952 SLC27A2O14975 620 aa28.99■■■□□ 2.23
LRFN4-202ENST00000393952 RASEFQ8IZ41 740 aa28.99■■■□□ 2.23
LRFN4-202ENST00000393952 IFNL3Q8IZI9 196 aa28.99■■■□□ 2.23
LRFN4-202ENST00000393952 CDK5RAP2Q96SN8 1893 aa28.98■■■□□ 2.23
LRFN4-202ENST00000393952 ALX1Q15699 326 aa28.98■■■□□ 2.23
LRFN4-202ENST00000393952 KCNB2Q92953 911 aa28.98■■■□□ 2.23
LRFN4-202ENST00000393952 SERPINA10Q9UK55 444 aa28.98■■■□□ 2.23
LRFN4-202ENST00000393952 PCDHAC2Q9Y5I4 1007 aa28.98■■■□□ 2.23
LRFN4-202ENST00000393952 SNX14Q9Y5W7 946 aa28.98■■■□□ 2.23
LRFN4-202ENST00000393952 RPAP1Q9BWH6 1393 aaPredicted RBP28.98■■■□□ 2.23
LRFN4-202ENST00000393952 RHBDL3P58872 404 aa28.97■■■□□ 2.23
LRFN4-202ENST00000393952 ZDHHC15Q96MV8 337 aa28.97■■■□□ 2.23
LRFN4-202ENST00000393952 CTNNA3Q9UI47 895 aa28.97■■■□□ 2.23
LRFN4-202ENST00000393952 GJA3Q9Y6H8 435 aa28.97■■■□□ 2.23
LRFN4-202ENST00000393952 GRIN3BO60391 1043 aa28.96■■■□□ 2.23
LRFN4-202ENST00000393952 ANAPC15P60006 121 aa28.96■■■□□ 2.23
LRFN4-202ENST00000393952 C9orf131Q5VYM1 1079 aa28.96■■■□□ 2.23
LRFN4-202ENST00000393952 APOBEC3HQ6NTF7 200 aaKnown RBP28.96■■■□□ 2.23
LRFN4-202ENST00000393952 CERS3Q8IU89 383 aa28.96■■■□□ 2.23
LRFN4-202ENST00000393952 NACAP1Q9BZK3 213 aa28.96■■■□□ 2.23
LRFN4-202ENST00000393952 TAF6LQ9Y6J9 622 aa28.96■■■□□ 2.23
LRFN4-202ENST00000393952 BAZ2AQ9UIF9 1905 aaKnown RBP28.96■■■□□ 2.23
LRFN4-202ENST00000393952 CYP21A2P08686 494 aa28.96■■■□□ 2.23
LRFN4-202ENST00000393952 PLCG2P16885 1265 aa28.96■■■□□ 2.23
LRFN4-202ENST00000393952 RBM5P52756 815 aaKnown RBP eCLIP28.96■■■□□ 2.23
LRFN4-202ENST00000393952 RNF20Q5VTR2 975 aa28.96■■■□□ 2.23
LRFN4-202ENST00000393952 NAPBQ9H115 298 aa28.96■■■□□ 2.23
LRFN4-202ENST00000393952 HDAC9Q9UKV0 1011 aa28.96■■■□□ 2.23
LRFN4-202ENST00000393952 USP17L8P0C7I0 530 aa28.95■■■□□ 2.22
LRFN4-202ENST00000393952 TDO2P48775 406 aa28.95■■■□□ 2.22
LRFN4-202ENST00000393952 CFAP100Q494V2 611 aa28.95■■■□□ 2.22
LRFN4-202ENST00000393952 TEX11Q8IYF3 940 aa28.95■■■□□ 2.22
LRFN4-202ENST00000393952 ZMYM6O95789 1325 aa28.95■■■□□ 2.22
LRFN4-202ENST00000393952 LAMA4Q16363 1823 aa28.94■■■□□ 2.22
LRFN4-202ENST00000393952 ECM29Q5VYK3 1845 aa28.93■■■□□ 2.22
LRFN4-202ENST00000393952 ZKSCAN1P17029 563 aaPredicted RBP28.93■■■□□ 2.22
LRFN4-202ENST00000393952 RPS12P25398 132 aaKnown RBP28.93■■■□□ 2.22
LRFN4-202ENST00000393952 GMPSP49915 693 aaPredicted RBP28.93■■■□□ 2.22
LRFN4-202ENST00000393952 HAND2P61296 217 aa28.93■■■□□ 2.22
LRFN4-202ENST00000393952 CDC42EP5Q6NZY7 148 aa28.93■■■□□ 2.22
LRFN4-202ENST00000393952 OGFOD1Q8N543 542 aa28.93■■■□□ 2.22
LRFN4-202ENST00000393952 IL17RAQ96F46 866 aa28.93■■■□□ 2.22
LRFN4-202ENST00000393952 USP40Q9NVE5 1235 aa28.93■■■□□ 2.22
LRFN4-202ENST00000393952 USP5P45974 858 aa28.92■■■□□ 2.22
LRFN4-202ENST00000393952 TGFBRAP1Q8WUH2 860 aa28.92■■■□□ 2.22
LRFN4-202ENST00000393952 DCP1AQ9NPI6 582 aaPredicted RBP28.92■■■□□ 2.22
LRFN4-202ENST00000393952 ATP8A2Q9NTI2 1148 aa28.92■■■□□ 2.22
LRFN4-202ENST00000393952 FOCADQ5VW36 1801 aa28.92■■■□□ 2.22
LRFN4-202ENST00000393952 NAV1Q8NEY1 1877 aa28.92■■■□□ 2.22
LRFN4-202ENST00000393952 UTRNP46939 3433 aa28.92■■■□□ 2.22
LRFN4-202ENST00000393952 SHTN1A0MZ66 631 aa28.92■■■□□ 2.22
LRFN4-202ENST00000393952 IMMTQ16891 758 aaKnown RBP28.92■■■□□ 2.22
LRFN4-202ENST00000393952 GIMAP6Q6P9H5 292 aa28.92■■■□□ 2.22
LRFN4-202ENST00000393952 TSGA10IPQ3SY00 556 aa28.9■■■□□ 2.22
LRFN4-202ENST00000393952 MAPKAPK5Q8IW41 473 aa28.9■■■□□ 2.22
LRFN4-202ENST00000393952 PRMT6Q96LA8 375 aaPredicted RBP28.9■■■□□ 2.22
LRFN4-202ENST00000393952 ZNF213O14771 459 aa28.89■■■□□ 2.22
LRFN4-202ENST00000393952 DLGAP5Q15398 846 aa28.89■■■□□ 2.22
LRFN4-202ENST00000393952 ADCK5Q3MIX3 580 aa28.89■■■□□ 2.22
LRFN4-202ENST00000393952 GPC2Q8N158 579 aa28.89■■■□□ 2.22
LRFN4-202ENST00000393952 DPF2Q92785 391 aa28.89■■■□□ 2.22
LRFN4-202ENST00000393952 DDRGK1Q96HY6 314 aa28.89■■■□□ 2.22
LRFN4-202ENST00000393952 MKRN1Q9UHC7 482 aaKnown RBP28.89■■■□□ 2.22
LRFN4-202ENST00000393952 ZNF280AP59817 542 aaPredicted RBP28.88■■■□□ 2.21
LRFN4-202ENST00000393952 NBPF3Q9H094 633 aa28.88■■■□□ 2.21
LRFN4-202ENST00000393952 SPDYE2BA6NHP3 402 aa28.88■■■□□ 2.21
LRFN4-202ENST00000393952 WDHD1O75717 1129 aaPredicted RBP28.88■■■□□ 2.21
LRFN4-202ENST00000393952 SPDYE6P0CI01 402 aa28.88■■■□□ 2.21
LRFN4-202ENST00000393952 RABEP1Q15276 862 aa28.88■■■□□ 2.21
LRFN4-202ENST00000393952 CTR9Q6PD62 1173 aa28.88■■■□□ 2.21
LRFN4-202ENST00000393952 STOX1Q6ZVD7 989 aa28.88■■■□□ 2.21
LRFN4-202ENST00000393952 JAKMIP1Q96N16 626 aaKnown RBP28.88■■■□□ 2.21
LRFN4-202ENST00000393952 LAMB1P07942 1786 aa28.87■■■□□ 2.21
LRFN4-202ENST00000393952 DDX60LQ5H9U9 1706 aaKnown RBP28.87■■■□□ 2.21
LRFN4-202ENST00000393952 FLT1P17948 1338 aa28.87■■■□□ 2.21
LRFN4-202ENST00000393952 ANP32AP39687 249 aaKnown RBP28.87■■■□□ 2.21
LRFN4-202ENST00000393952 MICALL2Q8IY33 904 aa28.87■■■□□ 2.21
LRFN4-202ENST00000393952 TDRD3Q9H7E2 651 aaKnown RBP28.87■■■□□ 2.21
LRFN4-202ENST00000393952 MCM9Q9NXL9 1143 aa28.87■■■□□ 2.21
LRFN4-202ENST00000393952 CYP2D7A0A087X1C5 515 aa28.86■■■□□ 2.21
LRFN4-202ENST00000393952 MINDY4BA8MYZ0 360 aa28.86■■■□□ 2.21
LRFN4-202ENST00000393952 USP17L12C9JPN9 530 aa28.86■■■□□ 2.21
LRFN4-202ENST00000393952 USP17L21D6R901 530 aa28.86■■■□□ 2.21
LRFN4-202ENST00000393952 MTMR14Q8NCE2 650 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 1667.7 ms