RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ZNF70Q9UC06 446 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-202ENST00000374676 AK9Q5TCS8 1911 aa13.76□□□□□ -0.21
HSPG2-202ENST00000374676 ASTN2O75129 1339 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-202ENST00000374676 TCRBV5S4A2TA0A5A2 114 aa13.75□□□□□ -0.21
HSPG2-202ENST00000374676 BAG3O95817 575 aa13.75□□□□□ -0.21
HSPG2-202ENST00000374676 ZFYP08048 801 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-202ENST00000374676 ADD2P35612 726 aa13.75□□□□□ -0.21
HSPG2-202ENST00000374676 BTDP43251 543 aa13.75□□□□□ -0.21
HSPG2-202ENST00000374676 FSTL1Q12841 308 aa13.75□□□□□ -0.21
HSPG2-202ENST00000374676 TTC22Q5TAA0 569 aa13.75□□□□□ -0.21
HSPG2-202ENST00000374676 MAP1SQ66K74 1059 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-202ENST00000374676 CDC42EP5Q6NZY7 148 aa13.75□□□□□ -0.21
HSPG2-202ENST00000374676 CDC37L1Q7L3B6 337 aa13.75□□□□□ -0.21
HSPG2-202ENST00000374676 CERS3Q8IU89 383 aa13.75□□□□□ -0.21
HSPG2-202ENST00000374676 CNTROBQ8N137 903 aa13.75□□□□□ -0.21
HSPG2-202ENST00000374676 USP40Q9NVE5 1235 aa13.75□□□□□ -0.21
HSPG2-202ENST00000374676 GGA3Q9NZ52 723 aa13.75□□□□□ -0.21
HSPG2-202ENST00000374676 ZNF532Q9HCE3 1301 aa13.74□□□□□ -0.21
HSPG2-202ENST00000374676 RNF113AO15541 343 aaKnown RBP13.74□□□□□ -0.21
HSPG2-202ENST00000374676 ITGBL1O95965 494 aaPredicted RBP13.74□□□□□ -0.21
HSPG2-202ENST00000374676 PLCG2P16885 1265 aa13.74□□□□□ -0.21
HSPG2-202ENST00000374676 ADGRA1Q86SQ6 560 aa13.74□□□□□ -0.21
HSPG2-202ENST00000374676 APOBEC3FQ8IUX4 373 aaKnown RBP13.74□□□□□ -0.21
HSPG2-202ENST00000374676 NOL10Q9BSC4 688 aaKnown RBP13.74□□□□□ -0.21
HSPG2-202ENST00000374676 FSD1Q9BTV5 496 aa13.74□□□□□ -0.21
HSPG2-202ENST00000374676 CLRN2A0PK11 232 aa13.73□□□□□ -0.21
HSPG2-202ENST00000374676 TRIM6-TRIM34B2RNG4 842 aa13.73□□□□□ -0.21
HSPG2-202ENST00000374676 NPM3O75607 178 aaKnown RBP13.73□□□□□ -0.21
HSPG2-202ENST00000374676 RHBDL3P58872 404 aa13.73□□□□□ -0.21
HSPG2-202ENST00000374676 TNFAIP1Q13829 316 aa13.73□□□□□ -0.21
HSPG2-202ENST00000374676 KRT26Q7Z3Y9 468 aa13.73□□□□□ -0.21
HSPG2-202ENST00000374676 SULF1Q8IWU6 871 aa13.73□□□□□ -0.21
HSPG2-202ENST00000374676 TMOD2Q9NZR1 351 aa13.73□□□□□ -0.21
HSPG2-202ENST00000374676 RFX7Q2KHR2 1363 aa13.72□□□□□ -0.21
HSPG2-202ENST00000374676 TNNI2P48788 182 aa13.72□□□□□ -0.21
HSPG2-202ENST00000374676 USP48Q86UV5 1035 aa13.72□□□□□ -0.21
HSPG2-202ENST00000374676 FAM83AQ86UY5 434 aa13.72□□□□□ -0.21
HSPG2-202ENST00000374676 IDI2Q9BXS1 227 aa13.72□□□□□ -0.21
HSPG2-202ENST00000374676 VEZTQ9HBM0 779 aa13.72□□□□□ -0.21
HSPG2-202ENST00000374676 AATFQ9NY61 560 aaKnown RBP eCLIP13.72□□□□□ -0.21
HSPG2-202ENST00000374676 PPP2R3BQ9Y5P8 575 aa13.72□□□□□ -0.21
HSPG2-202ENST00000374676 CDK5RAP2Q96SN8 1893 aa13.72□□□□□ -0.21
HSPG2-202ENST00000374676 MAGEB6P1A0A0J9YX57 407 aa13.71□□□□□ -0.21
HSPG2-202ENST00000374676 WDHD1O75717 1129 aaPredicted RBP13.71□□□□□ -0.21
HSPG2-202ENST00000374676 GSPT1P15170 499 aaKnown RBP13.71□□□□□ -0.21
HSPG2-202ENST00000374676 MIGA1Q8NAN2 632 aa13.71□□□□□ -0.21
HSPG2-202ENST00000374676 APPBP2Q92624 585 aa13.71□□□□□ -0.21
HSPG2-202ENST00000374676 RILPL2Q969X0 211 aa13.71□□□□□ -0.21
HSPG2-202ENST00000374676 RIOK1Q9BRS2 568 aaKnown RBP13.71□□□□□ -0.21
HSPG2-202ENST00000374676 GLIS2Q9BZE0 524 aaPredicted RBP13.71□□□□□ -0.21
HSPG2-202ENST00000374676 DEFB129Q9H1M3 183 aa13.71□□□□□ -0.21
HSPG2-202ENST00000374676 TRPM7Q96QT4 1865 aa13.71□□□□□ -0.21
HSPG2-202ENST00000374676 PASKQ96RG2 1323 aa13.7□□□□□ -0.22
HSPG2-202ENST00000374676 FOCADQ5VW36 1801 aa13.7□□□□□ -0.22
HSPG2-202ENST00000374676 TCP10L2B9ZVM9 353 aa13.7□□□□□ -0.22
HSPG2-202ENST00000374676 ENTPD3O75355 529 aa13.7□□□□□ -0.22
HSPG2-202ENST00000374676 CHGBP05060 677 aa13.7□□□□□ -0.22
HSPG2-202ENST00000374676 SDSP20132 328 aa13.7□□□□□ -0.22
HSPG2-202ENST00000374676 RGS3P49796 1198 aa13.7□□□□□ -0.22
HSPG2-202ENST00000374676 CACNB3P54284 484 aa13.7□□□□□ -0.22
HSPG2-202ENST00000374676 DYNLL1P63167 89 aaKnown RBP13.7□□□□□ -0.22
HSPG2-202ENST00000374676 NFIAQ12857 509 aa13.7□□□□□ -0.22
HSPG2-202ENST00000374676 RASA3Q14644 834 aa13.7□□□□□ -0.22
HSPG2-202ENST00000374676 SLFNL1Q499Z3 407 aa13.7□□□□□ -0.22
HSPG2-202ENST00000374676 ZMYM1Q5SVZ6 1142 aa13.7□□□□□ -0.22
HSPG2-202ENST00000374676 SKAP1Q86WV1 359 aa13.7□□□□□ -0.22
HSPG2-202ENST00000374676 TEX11Q8IYF3 940 aa13.7□□□□□ -0.22
HSPG2-202ENST00000374676 SH3RF3Q8TEJ3 882 aaPredicted RBP13.7□□□□□ -0.22
HSPG2-202ENST00000374676 FAM151AQ8WW52 585 aa13.7□□□□□ -0.22
HSPG2-202ENST00000374676 PUS7LQ9H0K6 701 aaKnown RBP13.7□□□□□ -0.22
HSPG2-202ENST00000374676 FAM198AQ9UFP1 575 aa13.7□□□□□ -0.22
HSPG2-202ENST00000374676 ADM5C9JUS6 153 aa13.69□□□□□ -0.22
HSPG2-202ENST00000374676 HIP1O00291 1037 aa13.69□□□□□ -0.22
HSPG2-202ENST00000374676 OSBP2Q969R2 916 aa13.69□□□□□ -0.22
HSPG2-202ENST00000374676 SCAF8Q9UPN6 1271 aaKnown RBP13.69□□□□□ -0.22
HSPG2-202ENST00000374676 CNTNAP1P78357 1384 aa13.69□□□□□ -0.22
HSPG2-202ENST00000374676 TRAF5O00463 557 aa13.68□□□□□ -0.22
HSPG2-202ENST00000374676 BMP2KLQ5H9B9 411 aa13.68□□□□□ -0.22
HSPG2-202ENST00000374676 AIDAQ96BJ3 306 aa13.68□□□□□ -0.22
HSPG2-202ENST00000374676 CDCA5Q96FF9 252 aa13.68□□□□□ -0.22
HSPG2-202ENST00000374676 TEPSINQ96N21 525 aa13.68□□□□□ -0.22
HSPG2-202ENST00000374676 STRBPQ96SI9 672 aaKnown RBP13.68□□□□□ -0.22
HSPG2-202ENST00000374676 DDX4Q9NQI0 724 aaKnown RBP13.68□□□□□ -0.22
HSPG2-202ENST00000374676 HELLSQ9NRZ9 838 aa13.68□□□□□ -0.22
HSPG2-202ENST00000374676 RPAP1Q9BWH6 1393 aaPredicted RBP13.68□□□□□ -0.22
HSPG2-202ENST00000374676 MYH1P12882 1939 aa13.67□□□□□ -0.22
HSPG2-202ENST00000374676 MBD4O95243 580 aa13.67□□□□□ -0.22
HSPG2-202ENST00000374676 SUPT20HL1Q3ZLR7 823 aa13.67□□□□□ -0.22
HSPG2-202ENST00000374676 DLK2Q6UY11 383 aa13.67□□□□□ -0.22
HSPG2-202ENST00000374676 LCORLQ8N3X6 602 aa13.67□□□□□ -0.22
HSPG2-202ENST00000374676 TGFBRAP1Q8WUH2 860 aa13.67□□□□□ -0.22
HSPG2-202ENST00000374676 CRNKL1Q9BZJ0 848 aaKnown RBP13.67□□□□□ -0.22
HSPG2-202ENST00000374676 TMEM39BQ9GZU3 492 aa13.67□□□□□ -0.22
HSPG2-202ENST00000374676 ARMT1Q9H993 441 aa13.67□□□□□ -0.22
HSPG2-202ENST00000374676 GTF3C3Q9Y5Q9 886 aa13.67□□□□□ -0.22
HSPG2-202ENST00000374676 M0R2C6 588 aa13.66□□□□□ -0.22
HSPG2-202ENST00000374676 GNAT2P19087 354 aa13.66□□□□□ -0.22
HSPG2-202ENST00000374676 C1QTNF8P60827 252 aa13.66□□□□□ -0.22
HSPG2-202ENST00000374676 FMR1Q06787 632 aaKnown RBP eCLIP13.66□□□□□ -0.22
HSPG2-202ENST00000374676 TCP10Q12799 353 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms