RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 NR1I2O75469 434 aa19.71■□□□□ 0.75
PHF1-202ENST00000374516 ONECUT3O60422 494 aaPredicted RBP19.71■□□□□ 0.75
PHF1-202ENST00000374516 MAP3K12Q12852 859 aa19.71■□□□□ 0.75
PHF1-202ENST00000374516 AIDAQ96BJ3 306 aa19.71■□□□□ 0.75
PHF1-202ENST00000374516 BSDC1Q9NW68 430 aaPredicted RBP19.71■□□□□ 0.75
PHF1-202ENST00000374516 MINPP1Q9UNW1 487 aa19.71■□□□□ 0.75
PHF1-202ENST00000374516 LAMA4Q16363 1823 aa19.71■□□□□ 0.75
PHF1-202ENST00000374516 SLC10A5Q5PT55 438 aa19.7■□□□□ 0.74
PHF1-202ENST00000374516 FAM196AQ6ZSG2 479 aa19.7■□□□□ 0.74
PHF1-202ENST00000374516 CACTINQ8WUQ7 758 aaKnown RBP19.7■□□□□ 0.74
PHF1-202ENST00000374516 PGBD1Q96JS3 809 aa19.7■□□□□ 0.74
PHF1-202ENST00000374516 NLRP3Q96P20 1036 aa19.7■□□□□ 0.74
PHF1-202ENST00000374516 NCOA5Q9HCD5 579 aaKnown RBP19.7■□□□□ 0.74
PHF1-202ENST00000374516 LRRC4BQ9NT99 713 aa19.7■□□□□ 0.74
PHF1-202ENST00000374516 CLIP2Q9UDT6 1046 aa19.7■□□□□ 0.74
PHF1-202ENST00000374516 DENND2AQ9ULE3 1009 aa19.7■□□□□ 0.74
PHF1-202ENST00000374516 MYH7P12883 1935 aa19.7■□□□□ 0.74
PHF1-202ENST00000374516 RFC4P35249 363 aa19.7■□□□□ 0.74
PHF1-202ENST00000374516 AGXT2Q9BYV1 514 aa19.7■□□□□ 0.74
PHF1-202ENST00000374516 NYXQ9GZU5 481 aa19.7■□□□□ 0.74
PHF1-202ENST00000374516 DNAJC25Q9H1X3 360 aa19.7■□□□□ 0.74
PHF1-202ENST00000374516 QTRT2Q9H974 415 aaKnown RBP19.7■□□□□ 0.74
PHF1-202ENST00000374516 NHSQ6T4R5 1651 aa19.69■□□□□ 0.74
PHF1-202ENST00000374516 NPHP1O15259 732 aa19.69■□□□□ 0.74
PHF1-202ENST00000374516 PFKFB2O60825 505 aa19.69■□□□□ 0.74
PHF1-202ENST00000374516 TRAPPC3LQ5T215 181 aa19.69■□□□□ 0.74
PHF1-202ENST00000374516 TPTE2Q6XPS3 522 aa19.69■□□□□ 0.74
PHF1-202ENST00000374516 STRBPQ96SI9 672 aaKnown RBP19.69■□□□□ 0.74
PHF1-202ENST00000374516 TPD52L1Q16890 204 aaPredicted RBP19.69■□□□□ 0.74
PHF1-202ENST00000374516 CCDC112Q8NEF3 446 aa19.69■□□□□ 0.74
PHF1-202ENST00000374516 NBPF3Q9H094 633 aa19.69■□□□□ 0.74
PHF1-202ENST00000374516 ARMT1Q9H993 441 aa19.68■□□□□ 0.74
PHF1-202ENST00000374516 LRP2BPQ9P2M1 347 aa19.68■□□□□ 0.74
PHF1-202ENST00000374516 LAMB2P55268 1798 aa19.68■□□□□ 0.74
PHF1-202ENST00000374516 PRC1O43663 620 aa19.68■□□□□ 0.74
PHF1-202ENST00000374516 MBD4O95243 580 aa19.68■□□□□ 0.74
PHF1-202ENST00000374516 CAVIN2O95810 425 aa19.68■□□□□ 0.74
PHF1-202ENST00000374516 PDIA3P30101 505 aaKnown RBP19.68■□□□□ 0.74
PHF1-202ENST00000374516 RPS8P62241 208 aaKnown RBP19.68■□□□□ 0.74
PHF1-202ENST00000374516 CCDC144BQ3MJ40 725 aa19.68■□□□□ 0.74
PHF1-202ENST00000374516 CCDC144CPQ8IYA2 1237 aa19.68■□□□□ 0.74
PHF1-202ENST00000374516 NKX2-3Q8TAU0 364 aa19.68■□□□□ 0.74
PHF1-202ENST00000374516 BICD2Q8TD16 824 aa19.68■□□□□ 0.74
PHF1-202ENST00000374516 ABCF2Q9UG63 623 aa19.68■□□□□ 0.74
PHF1-202ENST00000374516 ATRNO75882 1429 aa19.67■□□□□ 0.74
PHF1-202ENST00000374516 CTDNEP1O95476 244 aa19.67■□□□□ 0.74
PHF1-202ENST00000374516 NAA30Q147X3 362 aaPredicted RBP19.67■□□□□ 0.74
PHF1-202ENST00000374516 RALYLQ86SE5 291 aaKnown RBP19.67■□□□□ 0.74
PHF1-202ENST00000374516 NCOA7Q8NI08 942 aa19.67■□□□□ 0.74
PHF1-202ENST00000374516 ARAP2Q8WZ64 1704 aa19.67■□□□□ 0.74
PHF1-202ENST00000374516 RGL2O15211 777 aa19.67■□□□□ 0.74
PHF1-202ENST00000374516 CDC25BP30305 580 aa19.67■□□□□ 0.74
PHF1-202ENST00000374516 FOSBP53539 338 aa19.67■□□□□ 0.74
PHF1-202ENST00000374516 MB21D2Q8IYB1 491 aaPredicted RBP19.67■□□□□ 0.74
PHF1-202ENST00000374516 MIGA1Q8NAN2 632 aa19.67■□□□□ 0.74
PHF1-202ENST00000374516 CGNQ9P2M7 1197 aaKnown RBP19.67■□□□□ 0.74
PHF1-202ENST00000374516 SCN7AQ01118 1682 aa19.66■□□□□ 0.74
PHF1-202ENST00000374516 IGSF3O75054 1194 aa19.66■□□□□ 0.74
PHF1-202ENST00000374516 ANTXR2P58335 489 aa19.66■□□□□ 0.74
PHF1-202ENST00000374516 VPS37DQ86XT2 251 aa19.66■□□□□ 0.74
PHF1-202ENST00000374516 TBC1D10CQ8IV04 446 aa19.66■□□□□ 0.74
PHF1-202ENST00000374516 NSUN7Q8NE18 718 aaKnown RBP19.66■□□□□ 0.74
PHF1-202ENST00000374516 BCL11BQ9C0K0 894 aaPredicted RBP19.66■□□□□ 0.74
PHF1-202ENST00000374516 INCENPQ9NQS7 918 aa19.66■□□□□ 0.74
PHF1-202ENST00000374516 PRKAB2O43741 272 aa19.65■□□□□ 0.74
PHF1-202ENST00000374516 KLRK1P26718 216 aa19.65■□□□□ 0.74
PHF1-202ENST00000374516 UBE4AQ14139 1066 aa19.65■□□□□ 0.74
PHF1-202ENST00000374516 RAB11FIP4Q86YS3 637 aa19.65■□□□□ 0.74
PHF1-202ENST00000374516 LRRC8AQ8IWT6 810 aa19.65■□□□□ 0.74
PHF1-202ENST00000374516 CEP135Q66GS9 1140 aa19.65■□□□□ 0.74
PHF1-202ENST00000374516 DDX41Q9UJV9 622 aaKnown RBP19.65■□□□□ 0.74
PHF1-202ENST00000374516 PTPDC1A2A3K4 754 aa19.64■□□□□ 0.74
PHF1-202ENST00000374516 IQCB1Q15051 598 aa19.64■□□□□ 0.74
PHF1-202ENST00000374516 CAVIN4Q5BKX8 364 aa19.64■□□□□ 0.74
PHF1-202ENST00000374516 IFNL3Q8IZI9 196 aa19.64■□□□□ 0.74
PHF1-202ENST00000374516 SMARCC2Q8TAQ2 1214 aa19.64■□□□□ 0.74
PHF1-202ENST00000374516 ZNF274Q96GC6 653 aaPredicted RBP19.64■□□□□ 0.74
PHF1-202ENST00000374516 FAM84BQ96KN1 310 aaPredicted RBP19.64■□□□□ 0.74
PHF1-202ENST00000374516 EPB41L4AQ9HCS5 686 aaPredicted RBP19.64■□□□□ 0.74
PHF1-202ENST00000374516 PATL2C9JE40 543 aaKnown RBP19.64■□□□□ 0.73
PHF1-202ENST00000374516 TRDNQ13061 729 aa19.64■□□□□ 0.73
PHF1-202ENST00000374516 SLC51AQ86UW1 340 aa19.64■□□□□ 0.73
PHF1-202ENST00000374516 LCORLQ8N3X6 602 aa19.64■□□□□ 0.73
PHF1-202ENST00000374516 ZNF804BA4D1E1 1349 aa19.64■□□□□ 0.73
PHF1-202ENST00000374516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.63■□□□□ 0.73
PHF1-202ENST00000374516 H3BQV1 296 aa19.63■□□□□ 0.73
PHF1-202ENST00000374516 RESTQ13127 1097 aa19.63■□□□□ 0.73
PHF1-202ENST00000374516 NFIXQ14938 502 aa19.63■□□□□ 0.73
PHF1-202ENST00000374516 IFFO2Q5TF58 517 aa19.63■□□□□ 0.73
PHF1-202ENST00000374516 SARM1Q6SZW1 724 aa19.63■□□□□ 0.73
PHF1-202ENST00000374516 ADGRA1Q86SQ6 560 aa19.63■□□□□ 0.73
PHF1-202ENST00000374516 LLPHQ9BRT6 129 aaKnown RBP19.63■□□□□ 0.73
PHF1-202ENST00000374516 GNL3LQ9NVN8 582 aaKnown RBP19.63■□□□□ 0.73
PHF1-202ENST00000374516 RAI14Q9P0K7 980 aa19.63■□□□□ 0.73
PHF1-202ENST00000374516 KLF18A0A0U1RQI7 1052 aa19.63■□□□□ 0.73
PHF1-202ENST00000374516 GOLGA6L19H0YKK7 550 aa19.63■□□□□ 0.73
PHF1-202ENST00000374516 TM4SF1P30408 202 aa19.63■□□□□ 0.73
PHF1-202ENST00000374516 RBM6P78332 1123 aaKnown RBP19.63■□□□□ 0.73
PHF1-202ENST00000374516 ZNF592Q92610 1267 aa19.63■□□□□ 0.73
PHF1-202ENST00000374516 NAPBQ9H115 298 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms