RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 Q6ZUG5 572 aa31.14■■■□□ 2.58
ATPAF1-202ENST00000371937 NOL10Q9BSC4 688 aaKnown RBP31.14■■■□□ 2.58
ATPAF1-202ENST00000371937 C21orf2O43822 256 aa31.13■■■□□ 2.57
ATPAF1-202ENST00000371937 GRIK5Q16478 980 aa31.13■■■□□ 2.57
ATPAF1-202ENST00000371937 SDR42E1Q8WUS8 393 aa31.13■■■□□ 2.57
ATPAF1-202ENST00000371937 NBPF3Q9H094 633 aa31.13■■■□□ 2.57
ATPAF1-202ENST00000371937 RTKN2Q8IZC4 609 aa31.12■■■□□ 2.57
ATPAF1-202ENST00000371937 TPCN1Q9ULQ1 816 aa31.12■■■□□ 2.57
ATPAF1-202ENST00000371937 SNED1Q8TER0 1413 aa31.12■■■□□ 2.57
ATPAF1-202ENST00000371937 MCM5P33992 734 aa31.12■■■□□ 2.57
ATPAF1-202ENST00000371937 CCDC93Q567U6 631 aa31.12■■■□□ 2.57
ATPAF1-202ENST00000371937 TBC1D10CQ8IV04 446 aa31.12■■■□□ 2.57
ATPAF1-202ENST00000371937 ATP8A2Q9NTI2 1148 aa31.12■■■□□ 2.57
ATPAF1-202ENST00000371937 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.12■■■□□ 2.57
ATPAF1-202ENST00000371937 MROH7-TTC4A0A0A0MT08 1334 aa31.11■■■□□ 2.57
ATPAF1-202ENST00000371937 FBXL16Q8N461 479 aa31.11■■■□□ 2.57
ATPAF1-202ENST00000371937 WDR19Q8NEZ3 1342 aa31.11■■■□□ 2.57
ATPAF1-202ENST00000371937 PPP4CP60510 307 aa31.1■■■□□ 2.57
ATPAF1-202ENST00000371937 DIXDC1Q155Q3 683 aa31.1■■■□□ 2.57
ATPAF1-202ENST00000371937 ME3Q16798 604 aa31.1■■■□□ 2.57
ATPAF1-202ENST00000371937 MB21D2Q8IYB1 491 aaPredicted RBP31.1■■■□□ 2.57
ATPAF1-202ENST00000371937 AGXT2Q9BYV1 514 aa31.1■■■□□ 2.57
ATPAF1-202ENST00000371937 CHD4Q14839 1912 aa31.1■■■□□ 2.57
ATPAF1-202ENST00000371937 FBXW7Q969H0 707 aa31.1■■■□□ 2.57
ATPAF1-202ENST00000371937 FAM163AQ96GL9 167 aaPredicted RBP31.1■■■□□ 2.57
ATPAF1-202ENST00000371937 CNNM2Q9H8M5 875 aa31.1■■■□□ 2.57
ATPAF1-202ENST00000371937 KIAA2012Q0VF49 1180 aa31.09■■■□□ 2.57
ATPAF1-202ENST00000371937 PIM2Q9P1W9 311 aa31.09■■■□□ 2.57
ATPAF1-202ENST00000371937 LARGE1O95461 756 aa31.08■■■□□ 2.57
ATPAF1-202ENST00000371937 AKNAD1Q5T1N1 836 aa31.08■■■□□ 2.57
ATPAF1-202ENST00000371937 SOGA3Q5TF21 947 aa31.08■■■□□ 2.57
ATPAF1-202ENST00000371937 DBNDD1Q9H9R9 158 aa31.08■■■□□ 2.57
ATPAF1-202ENST00000371937 ANAPC4Q9UJX5 808 aa31.08■■■□□ 2.57
ATPAF1-202ENST00000371937 NUCB2P80303 420 aa31.08■■■□□ 2.57
ATPAF1-202ENST00000371937 MFSD6Q6ZSS7 791 aa31.08■■■□□ 2.57
ATPAF1-202ENST00000371937 BRF1Q92994 677 aa31.08■■■□□ 2.57
ATPAF1-202ENST00000371937 RNF41Q9H4P4 317 aaPredicted RBP31.08■■■□□ 2.57
ATPAF1-202ENST00000371937 PPARAQ07869 468 aa31.07■■■□□ 2.56
ATPAF1-202ENST00000371937 STAG1Q8WVM7 1258 aa31.07■■■□□ 2.56
ATPAF1-202ENST00000371937 LRRC2Q9BYS8 371 aa31.07■■■□□ 2.56
ATPAF1-202ENST00000371937 PRC1O43663 620 aa31.06■■■□□ 2.56
ATPAF1-202ENST00000371937 CTDSPL2Q05D32 466 aa31.06■■■□□ 2.56
ATPAF1-202ENST00000371937 PSMD1Q99460 953 aa31.06■■■□□ 2.56
ATPAF1-202ENST00000371937 KRT23Q9C075 422 aa31.06■■■□□ 2.56
ATPAF1-202ENST00000371937 MYH2Q9UKX2 1941 aa31.06■■■□□ 2.56
ATPAF1-202ENST00000371937 TIAM2Q8IVF5 1701 aa31.06■■■□□ 2.56
ATPAF1-202ENST00000371937 GPR75-ASB3A0A0A6YYF3 556 aa31.05■■■□□ 2.56
ATPAF1-202ENST00000371937 ECE2O60344 883 aa31.05■■■□□ 2.56
ATPAF1-202ENST00000371937 PLCG2P16885 1265 aa31.05■■■□□ 2.56
ATPAF1-202ENST00000371937 DCP1AQ9NPI6 582 aaPredicted RBP31.05■■■□□ 2.56
ATPAF1-202ENST00000371937 AOC3Q16853 763 aa31.05■■■□□ 2.56
ATPAF1-202ENST00000371937 CCDC83Q8IWF9 413 aa31.05■■■□□ 2.56
ATPAF1-202ENST00000371937 SGIP1Q9BQI5 828 aa31.05■■■□□ 2.56
ATPAF1-202ENST00000371937 MINDY4BA8MYZ0 360 aa31.04■■■□□ 2.56
ATPAF1-202ENST00000371937 FKBP1AP62942 108 aaKnown RBP31.04■■■□□ 2.56
ATPAF1-202ENST00000371937 RAB3GAP1Q15042 981 aa31.04■■■□□ 2.56
ATPAF1-202ENST00000371937 STRIP1Q5VSL9 837 aa31.04■■■□□ 2.56
ATPAF1-202ENST00000371937 CHST3Q7LGC8 479 aa31.04■■■□□ 2.56
ATPAF1-202ENST00000371937 GAKO14976 1311 aa31.04■■■□□ 2.56
ATPAF1-202ENST00000371937 CD2APQ9Y5K6 639 aa31.03■■■□□ 2.56
ATPAF1-202ENST00000371937 PSDA5PKW4 1024 aaPredicted RBP31.03■■■□□ 2.56
ATPAF1-202ENST00000371937 PPIP5K2O43314 1243 aa31.03■■■□□ 2.56
ATPAF1-202ENST00000371937 BTDP43251 543 aa31.03■■■□□ 2.56
ATPAF1-202ENST00000371937 CTR9Q6PD62 1173 aa31.03■■■□□ 2.56
ATPAF1-202ENST00000371937 CERS5Q8N5B7 392 aa31.03■■■□□ 2.56
ATPAF1-202ENST00000371937 SH3RF3Q8TEJ3 882 aaPredicted RBP31.03■■■□□ 2.56
ATPAF1-202ENST00000371937 ARPP21Q9UBL0 812 aaPredicted RBP31.03■■■□□ 2.56
ATPAF1-202ENST00000371937 NEDD4P46934 1319 aa31.03■■■□□ 2.56
ATPAF1-202ENST00000371937 B4E1Z4 1266 aa31.02■■■□□ 2.56
ATPAF1-202ENST00000371937 PCP11498 1178 aaKnown RBP31.02■■■□□ 2.56
ATPAF1-202ENST00000371937 USP5P45974 858 aa31.02■■■□□ 2.56
ATPAF1-202ENST00000371937 VPS33BQ9H267 617 aa31.02■■■□□ 2.56
ATPAF1-202ENST00000371937 SMC3Q9UQE7 1217 aa31.02■■■□□ 2.56
ATPAF1-202ENST00000371937 USP17L12C9JPN9 530 aa31.01■■■□□ 2.56
ATPAF1-202ENST00000371937 USP17L21D6R901 530 aa31.01■■■□□ 2.56
ATPAF1-202ENST00000371937 ANTXR2P58335 489 aa31.01■■■□□ 2.56
ATPAF1-202ENST00000371937 SBK1Q52WX2 424 aa31.01■■■□□ 2.56
ATPAF1-202ENST00000371937 DALRD3Q5D0E6 543 aaKnown RBP31.01■■■□□ 2.56
ATPAF1-202ENST00000371937 NECAB1Q8N987 351 aa31.01■■■□□ 2.56
ATPAF1-202ENST00000371937 TTF2Q9UNY4 1162 aaKnown RBP31.01■■■□□ 2.56
ATPAF1-202ENST00000371937 ZNF274Q96GC6 653 aaPredicted RBP31.01■■■□□ 2.55
ATPAF1-202ENST00000371937 PPP1R1BQ9UD71 204 aaPredicted RBP31.01■■■□□ 2.55
ATPAF1-202ENST00000371937 USP17L3A6NCW0 530 aa31■■■□□ 2.55
ATPAF1-202ENST00000371937 USP17L4A6NCW7 530 aa31■■■□□ 2.55
ATPAF1-202ENST00000371937 EVCP57679 992 aa31■■■□□ 2.55
ATPAF1-202ENST00000371937 NFKBIBQ15653 356 aa31■■■□□ 2.55
ATPAF1-202ENST00000371937 USP17L1Q7RTZ2 530 aa31■■■□□ 2.55
ATPAF1-202ENST00000371937 CHMP4CQ96CF2 233 aa31■■■□□ 2.55
ATPAF1-202ENST00000371937 TMEM87BQ96K49 555 aa31■■■□□ 2.55
ATPAF1-202ENST00000371937 APOBRQ0VD83 1088 aa30.99■■■□□ 2.55
ATPAF1-202ENST00000371937 GTF3C6Q969F1 213 aa30.99■■■□□ 2.55
ATPAF1-202ENST00000371937 BAZ2AQ9UIF9 1905 aaKnown RBP30.98■■■□□ 2.55
ATPAF1-202ENST00000371937 SLC3A2P08195 630 aaKnown RBP30.98■■■□□ 2.55
ATPAF1-202ENST00000371937 CYB5R4Q7L1T6 521 aa30.98■■■□□ 2.55
ATPAF1-202ENST00000371937 TOMM22Q9NS69 142 aa30.98■■■□□ 2.55
ATPAF1-202ENST00000371937 MKRN1Q9UHC7 482 aaKnown RBP30.98■■■□□ 2.55
ATPAF1-202ENST00000371937 PFKFB2O60825 505 aa30.98■■■□□ 2.55
ATPAF1-202ENST00000371937 ST3GAL1Q11201 340 aa30.98■■■□□ 2.55
ATPAF1-202ENST00000371937 STK3Q13188 491 aa30.98■■■□□ 2.55
ATPAF1-202ENST00000371937 DACT2Q5SW24 774 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms