RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 CCDC102AQ96A19 550 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 COPRSQ9NQ92 184 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 MAST3O60307 1309 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 RNMTO43148 476 aaKnown RBP11.07□□□□□ -0.64
LRRC40-201ENST00000370952 RFX5P48382 616 aaPredicted RBP11.07□□□□□ -0.64
LRRC40-201ENST00000370952 NEXNQ0ZGT2 675 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 SLC39A14Q15043 492 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 AKAP4Q5JQC9 854 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 PAXIP1Q6ZW49 1069 aaPredicted RBP11.07□□□□□ -0.64
LRRC40-201ENST00000370952 HDXQ7Z353 690 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 BRAPQ7Z569 592 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 GOLGA6L1Q8N7Z2 621 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 DSCC1Q9BVC3 393 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 C19orf44Q9H6X5 657 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 PAG1Q9NWQ8 432 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 AKAP2Q9Y2D5 859 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 EIF3CLB5ME19 914 aaKnown RBP11.07□□□□□ -0.64
LRRC40-201ENST00000370952 RXRAP19793 462 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 TIMM10P62072 90 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 FMR1Q06787 632 aaKnown RBP eCLIP11.07□□□□□ -0.64
LRRC40-201ENST00000370952 TTC31Q49AM3 519 aaPredicted RBP11.07□□□□□ -0.64
LRRC40-201ENST00000370952 SPECC1LQ69YQ0 1117 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 UBE3BQ7Z3V4 1068 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 CNNM3Q8NE01 707 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 XAGE3Q8WTP9 111 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 EIF3CQ99613 913 aaKnown RBP11.07□□□□□ -0.64
LRRC40-201ENST00000370952 DDX21Q9NR30 783 aaKnown RBP eCLIP11.07□□□□□ -0.64
LRRC40-201ENST00000370952 HPS5Q9UPZ3 1129 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 AMOTL2Q9Y2J4 779 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 NFE2L3Q9Y4A8 694 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 PALLDQ8WX93 1383 aa11.07□□□□□ -0.64
LRRC40-201ENST00000370952 A0A1B0GUL7 405 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 M0R2C6 588 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 IVLP07476 585 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 VSNL1P62760 191 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 SLC39A6Q13433 755 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 PDIA6Q15084 440 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 HSP90AB3PQ58FF7 597 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 ESF1Q9H501 851 aaKnown RBP11.06□□□□□ -0.64
LRRC40-201ENST00000370952 HPSEQ9Y251 543 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 SLIT1O75093 1534 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 MRC1P22897 1456 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 MARF1Q9Y4F3 1742 aaKnown RBP11.06□□□□□ -0.64
LRRC40-201ENST00000370952 PRC1O43663 620 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 CYB5RLQ6IPT4 315 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 COPS6Q7L5N1 327 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 DRC1Q96MC2 740 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 SAMSN1Q9NSI8 373 aaKnown RBP11.06□□□□□ -0.64
LRRC40-201ENST00000370952 L1RE1Q9UN81 338 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 PXDNQ92626 1479 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 ANKARQ7Z5J8 1434 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 TMEM2Q9UHN6 1383 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 MYH8P13535 1937 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 ATP5J2-PTCD1G3V325 749 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 PTCD1O75127 700 aaKnown RBP11.06□□□□□ -0.64
LRRC40-201ENST00000370952 CCDC175P0C221 793 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 KIF4BQ2VIQ3 1234 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 NOM1Q5C9Z4 860 aaKnown RBP11.06□□□□□ -0.64
LRRC40-201ENST00000370952 C1orf141Q5JVX7 400 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 ZNF569Q5MCW4 686 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 ZMYM1Q5SVZ6 1142 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 RAD9BQ6WBX8 426 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 HELLSQ9NRZ9 838 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 RNF216Q9NWF9 866 aaPredicted RBP11.06□□□□□ -0.64
LRRC40-201ENST00000370952 CDC23Q9UJX2 597 aa11.06□□□□□ -0.64
LRRC40-201ENST00000370952 LTN1O94822 1766 aa11.05□□□□□ -0.64
LRRC40-201ENST00000370952 RFX7Q2KHR2 1363 aa11.05□□□□□ -0.64
LRRC40-201ENST00000370952 EIF3JO75822 258 aaKnown RBP11.05□□□□□ -0.64
LRRC40-201ENST00000370952 MAGEA9P43362 315 aa11.05□□□□□ -0.64
LRRC40-201ENST00000370952 CASP8Q14790 479 aa11.05□□□□□ -0.64
LRRC40-201ENST00000370952 LRRC31Q6UY01 552 aa11.05□□□□□ -0.64
LRRC40-201ENST00000370952 VPS37DQ86XT2 251 aa11.05□□□□□ -0.64
LRRC40-201ENST00000370952 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.05□□□□□ -0.64
LRRC40-201ENST00000370952 TEX13AQ9BXU3 409 aaPredicted RBP11.05□□□□□ -0.64
LRRC40-201ENST00000370952 JRKLQ9Y4A0 524 aa11.05□□□□□ -0.64
LRRC40-201ENST00000370952 TEX33O43247 280 aa11.05□□□□□ -0.64
LRRC40-201ENST00000370952 ABL1P00519 1130 aa11.05□□□□□ -0.64
LRRC40-201ENST00000370952 PRR29P0C7W0 189 aa11.05□□□□□ -0.64
LRRC40-201ENST00000370952 PLEKHO1Q53GL0 409 aaPredicted RBP11.05□□□□□ -0.64
LRRC40-201ENST00000370952 TAF7LQ5H9L4 462 aa11.05□□□□□ -0.64
LRRC40-201ENST00000370952 CCDC102BQ68D86 513 aa11.05□□□□□ -0.64
LRRC40-201ENST00000370952 GRAMD1CQ8IYS0 662 aa11.05□□□□□ -0.64
LRRC40-201ENST00000370952 RGS22Q8NE09 1264 aa11.05□□□□□ -0.64
LRRC40-201ENST00000370952 ERLIN1O75477 346 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 PTPAQ15257 358 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 HNRNPLLQ8WVV9 542 aaKnown RBP11.04□□□□□ -0.64
LRRC40-201ENST00000370952 CDC5LQ99459 802 aaKnown RBP11.04□□□□□ -0.64
LRRC40-201ENST00000370952 FAM204AQ9H8W3 233 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 RAI14Q9P0K7 980 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 RAB21Q9UL25 225 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 KCNH3Q9ULD8 1083 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 DENND2AQ9ULE3 1009 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 ADGRG1Q9Y653 693 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 TSPOAP1O95153 1857 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 LRRIQ3A6PVS8 624 aaPredicted RBP11.04□□□□□ -0.64
LRRC40-201ENST00000370952 KIF5CO60282 957 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 SART3Q15020 963 aaKnown RBP11.04□□□□□ -0.64
LRRC40-201ENST00000370952 HSP90B2PQ58FF3 399 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 RESP18Q5W5W9 173 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 CTR9Q6PD62 1173 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms