RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 CTU1Q7Z7A3 348 aaKnown RBP8.2□□□□□ -1.1
RNU1-55P-201ENST00000365510 SPATA5Q8NB90 893 aa8.2□□□□□ -1.1
RNU1-55P-201ENST00000365510 FAM84BQ96KN1 310 aaPredicted RBP8.2□□□□□ -1.1
RNU1-55P-201ENST00000365510 FSD1Q9BTV5 496 aa8.2□□□□□ -1.1
RNU1-55P-201ENST00000365510 PAG1Q9NWQ8 432 aa8.2□□□□□ -1.1
RNU1-55P-201ENST00000365510 DENND2AQ9ULE3 1009 aa8.2□□□□□ -1.1
RNU1-55P-201ENST00000365510 PDS5AQ29RF7 1337 aaKnown RBP8.2□□□□□ -1.1
RNU1-55P-201ENST00000365510 IRS2Q9Y4H2 1338 aa8.2□□□□□ -1.1
RNU1-55P-201ENST00000365510 USP17L3A6NCW0 530 aa8.19□□□□□ -1.1
RNU1-55P-201ENST00000365510 USP17L4A6NCW7 530 aa8.19□□□□□ -1.1
RNU1-55P-201ENST00000365510 HIP1O00291 1037 aa8.19□□□□□ -1.1
RNU1-55P-201ENST00000365510 GOLIM4O00461 696 aa8.19□□□□□ -1.1
RNU1-55P-201ENST00000365510 ZBTB22O15209 634 aa8.19□□□□□ -1.1
RNU1-55P-201ENST00000365510 EIF5BO60841 1220 aaKnown RBP8.19□□□□□ -1.1
RNU1-55P-201ENST00000365510 ECM2O94769 699 aaPredicted RBP8.19□□□□□ -1.1
RNU1-55P-201ENST00000365510 RPS12P25398 132 aaKnown RBP8.19□□□□□ -1.1
RNU1-55P-201ENST00000365510 DACT2Q5SW24 774 aa8.19□□□□□ -1.1
RNU1-55P-201ENST00000365510 USP17L1Q7RTZ2 530 aa8.19□□□□□ -1.1
RNU1-55P-201ENST00000365510 TICAM2Q86XR7 235 aa8.19□□□□□ -1.1
RNU1-55P-201ENST00000365510 CLMNQ96JQ2 1002 aa8.19□□□□□ -1.1
RNU1-55P-201ENST00000365510 COA1Q9GZY4 146 aa8.19□□□□□ -1.1
RNU1-55P-201ENST00000365510 HDAC9Q9UKV0 1011 aa8.19□□□□□ -1.1
RNU1-55P-201ENST00000365510 COL1A1P02452 1464 aaPredicted RBP8.19□□□□□ -1.1
RNU1-55P-201ENST00000365510 POTEFA5A3E0 1075 aa8.18□□□□□ -1.1
RNU1-55P-201ENST00000365510 F8W031 263 aaPredicted RBP8.18□□□□□ -1.1
RNU1-55P-201ENST00000365510 GPR25O00155 361 aa8.18□□□□□ -1.1
RNU1-55P-201ENST00000365510 WNT10BO00744 389 aa8.18□□□□□ -1.1
RNU1-55P-201ENST00000365510 ZAP70P43403 619 aa8.18□□□□□ -1.1
RNU1-55P-201ENST00000365510 PI16Q6UXB8 463 aa8.18□□□□□ -1.1
RNU1-55P-201ENST00000365510 TBC1D9Q6ZT07 1266 aa8.18□□□□□ -1.1
RNU1-55P-201ENST00000365510 KIAA0825Q8IV33 1275 aa8.18□□□□□ -1.1
RNU1-55P-201ENST00000365510 ZGPATQ8N5A5 531 aaKnown RBP8.18□□□□□ -1.1
RNU1-55P-201ENST00000365510 KBTBD3Q8NAB2 608 aa8.18□□□□□ -1.1
RNU1-55P-201ENST00000365510 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.18□□□□□ -1.1
RNU1-55P-201ENST00000365510 SNRKQ9NRH2 765 aa8.18□□□□□ -1.1
RNU1-55P-201ENST00000365510 DIAPH3Q9NSV4 1193 aa8.18□□□□□ -1.1
RNU1-55P-201ENST00000365510 HMG20BQ9P0W2 317 aa8.18□□□□□ -1.1
RNU1-55P-201ENST00000365510 IQSEC3Q9UPP2 1182 aaPredicted RBP8.18□□□□□ -1.1
RNU1-55P-201ENST00000365510 NDUFB9Q9Y6M9 179 aa8.18□□□□□ -1.1
RNU1-55P-201ENST00000365510 AK9Q5TCS8 1911 aa8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 MYH13Q9UKX3 1938 aa8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 IDH1O75874 414 aaKnown RBP8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 MYCP01106 439 aaPredicted RBP8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 ZFYP08048 801 aaPredicted RBP8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 IL1R1P14778 569 aa8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 GTF2IP78347 998 aa8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 MAP3K12Q12852 859 aa8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 CHAF1AQ13111 956 aaPredicted RBP8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 C8orf34Q49A92 452 aa8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 ZSCAN25Q6NSZ9 544 aa8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 CERS5Q8N5B7 392 aa8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 AGBL3Q8NEM8 1001 aa8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 TDRD7Q8NHU6 1098 aaKnown RBP8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 WDR66Q8TBY9 1149 aa8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 TBC1D22AQ8WUA7 517 aa8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 RUFY2Q8WXA3 655 aa8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 EDC3Q96F86 508 aaKnown RBP8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 CD209Q9NNX6 404 aa8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 SAGE1Q9NXZ1 904 aa8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 ANGEL1Q9UNK9 670 aaKnown RBP8.17□□□□□ -1.1
RNU1-55P-201ENST00000365510 CLRN2A0PK11 232 aa8.16□□□□□ -1.1
RNU1-55P-201ENST00000365510 IGSF3O75054 1194 aa8.16□□□□□ -1.1
RNU1-55P-201ENST00000365510 CYP2E1P05181 493 aaPredicted RBP8.16□□□□□ -1.1
RNU1-55P-201ENST00000365510 CHMLP26374 656 aa8.16□□□□□ -1.1
RNU1-55P-201ENST00000365510 GJA5P36382 358 aa8.16□□□□□ -1.1
RNU1-55P-201ENST00000365510 TM4SF4P48230 202 aa8.16□□□□□ -1.1
RNU1-55P-201ENST00000365510 SPTY2D1Q68D10 685 aaPredicted RBP8.16□□□□□ -1.1
RNU1-55P-201ENST00000365510 TTLL5Q6EMB2 1281 aa8.16□□□□□ -1.1
RNU1-55P-201ENST00000365510 PODNQ7Z5L7 613 aa8.16□□□□□ -1.1
RNU1-55P-201ENST00000365510 CDAN1Q8IWY9 1227 aa8.16□□□□□ -1.1
RNU1-55P-201ENST00000365510 RAD50Q92878 1312 aa8.16□□□□□ -1.1
RNU1-55P-201ENST00000365510 ANTXR1Q9H6X2 564 aa8.16□□□□□ -1.1
RNU1-55P-201ENST00000365510 SALL1Q9NSC2 1324 aa8.16□□□□□ -1.1
RNU1-55P-201ENST00000365510 LRP2BPQ9P2M1 347 aa8.16□□□□□ -1.1
RNU1-55P-201ENST00000365510 ABCF2Q9UG63 623 aa8.16□□□□□ -1.1
RNU1-55P-201ENST00000365510 MAST2Q6P0Q8 1798 aa8.15□□□□□ -1.1
RNU1-55P-201ENST00000365510 IGF2BP3O00425 579 aaKnown RBP eCLIP8.15□□□□□ -1.1
RNU1-55P-201ENST00000365510 RNF113AO15541 343 aaKnown RBP8.15□□□□□ -1.1
RNU1-55P-201ENST00000365510 EN2P19622 333 aaPredicted RBP8.15□□□□□ -1.1
RNU1-55P-201ENST00000365510 MFSD14BQ5SR56 506 aa8.15□□□□□ -1.1
RNU1-55P-201ENST00000365510 NBPF12Q5TAG4 269 aaPredicted RBP8.15□□□□□ -1.1
RNU1-55P-201ENST00000365510 SPRYD7Q5W111 196 aa8.15□□□□□ -1.1
RNU1-55P-201ENST00000365510 TMED8Q6PL24 325 aaPredicted RBP8.15□□□□□ -1.1
RNU1-55P-201ENST00000365510 ERICH6Q7L0X2 663 aa8.15□□□□□ -1.1
RNU1-55P-201ENST00000365510 CNKSR2Q8WXI2 1034 aa8.15□□□□□ -1.1
RNU1-55P-201ENST00000365510 PRMT6Q96LA8 375 aaPredicted RBP8.15□□□□□ -1.1
RNU1-55P-201ENST00000365510 UPF2Q9HAU5 1272 aaKnown RBP8.15□□□□□ -1.1
RNU1-55P-201ENST00000365510 PIH1D3Q9NQM4 214 aaKnown RBP8.15□□□□□ -1.1
RNU1-55P-201ENST00000365510 RAI14Q9P0K7 980 aa8.15□□□□□ -1.1
RNU1-55P-201ENST00000365510 SUGT1Q9Y2Z0 365 aa8.15□□□□□ -1.1
RNU1-55P-201ENST00000365510 DOCK2Q92608 1830 aa8.15□□□□□ -1.11
RNU1-55P-201ENST00000365510 KIAA0100Q14667 2235 aaKnown RBP8.14□□□□□ -1.11
RNU1-55P-201ENST00000365510 MAST3O60307 1309 aa8.14□□□□□ -1.11
RNU1-55P-201ENST00000365510 FAM205AQ6ZU69 1335 aa8.14□□□□□ -1.11
RNU1-55P-201ENST00000365510 FKTNO75072 461 aa8.14□□□□□ -1.11
RNU1-55P-201ENST00000365510 REC8O95072 547 aa8.14□□□□□ -1.11
RNU1-55P-201ENST00000365510 LDHBP07195 334 aaKnown RBP8.14□□□□□ -1.11
RNU1-55P-201ENST00000365510 PDE6AP16499 860 aa8.14□□□□□ -1.11
RNU1-55P-201ENST00000365510 ADD2P35612 726 aa8.14□□□□□ -1.11
RNU1-55P-201ENST00000365510 MFAP1P55081 439 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms