RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 M0R2C6 588 aa24.78■■□□□ 1.56
SHISA4-201ENST00000362011 EPS15P42566 896 aa24.78■■□□□ 1.56
SHISA4-201ENST00000362011 ANO2Q9NQ90 1003 aa24.78■■□□□ 1.56
SHISA4-201ENST00000362011 KCNQ5Q9NR82 932 aa24.78■■□□□ 1.56
SHISA4-201ENST00000362011 GJA3Q9Y6H8 435 aa24.78■■□□□ 1.56
SHISA4-201ENST00000362011 GSTO1P78417 241 aa24.77■■□□□ 1.56
SHISA4-201ENST00000362011 GRIK5Q16478 980 aa24.77■■□□□ 1.56
SHISA4-201ENST00000362011 DACT2Q5SW24 774 aa24.77■■□□□ 1.56
SHISA4-201ENST00000362011 CCDC129Q6ZRS4 1044 aa24.77■■□□□ 1.56
SHISA4-201ENST00000362011 USP50Q70EL3 339 aaPredicted RBP24.77■■□□□ 1.56
SHISA4-201ENST00000362011 ZNF589Q86UQ0 364 aaPredicted RBP24.77■■□□□ 1.56
SHISA4-201ENST00000362011 BAZ2AQ9UIF9 1905 aaKnown RBP24.77■■□□□ 1.56
SHISA4-201ENST00000362011 HSPA8P11142 646 aaKnown RBP24.76■■□□□ 1.55
SHISA4-201ENST00000362011 LMOD1P29536 600 aaPredicted RBP24.76■■□□□ 1.55
SHISA4-201ENST00000362011 LBX1P52954 281 aa24.76■■□□□ 1.55
SHISA4-201ENST00000362011 CERS5Q8N5B7 392 aa24.76■■□□□ 1.55
SHISA4-201ENST00000362011 PUS7LQ9H0K6 701 aaKnown RBP24.76■■□□□ 1.55
SHISA4-201ENST00000362011 NAV1Q8NEY1 1877 aa24.75■■□□□ 1.55
SHISA4-201ENST00000362011 EPB41L2O43491 1005 aaKnown RBP24.75■■□□□ 1.55
SHISA4-201ENST00000362011 LDHCP07864 332 aa24.75■■□□□ 1.55
SHISA4-201ENST00000362011 MAP2K1Q02750 393 aaPredicted RBP24.75■■□□□ 1.55
SHISA4-201ENST00000362011 ZNF384Q8TF68 577 aa24.75■■□□□ 1.55
SHISA4-201ENST00000362011 GPAA1O43292 621 aa24.74■■□□□ 1.55
SHISA4-201ENST00000362011 SLF2Q8IX21 1173 aa24.74■■□□□ 1.55
SHISA4-201ENST00000362011 MXD3Q9BW11 206 aa24.74■■□□□ 1.55
SHISA4-201ENST00000362011 USP26Q9BXU7 913 aa24.74■■□□□ 1.55
SHISA4-201ENST00000362011 LSG1Q9H089 658 aaKnown RBP24.74■■□□□ 1.55
SHISA4-201ENST00000362011 TSHZ2Q9NRE2 1034 aa24.74■■□□□ 1.55
SHISA4-201ENST00000362011 MYO3BQ8WXR4 1341 aa24.73■■□□□ 1.55
SHISA4-201ENST00000362011 LAMB1P07942 1786 aa24.73■■□□□ 1.55
SHISA4-201ENST00000362011 RAD17O75943 681 aa24.73■■□□□ 1.55
SHISA4-201ENST00000362011 FMR1Q06787 632 aaKnown RBP eCLIP24.73■■□□□ 1.55
SHISA4-201ENST00000362011 CST9Q5W186 159 aa24.73■■□□□ 1.55
SHISA4-201ENST00000362011 ABT1Q9ULW3 272 aaKnown RBP24.73■■□□□ 1.55
SHISA4-201ENST00000362011 MYH1P12882 1939 aa24.72■■□□□ 1.55
SHISA4-201ENST00000362011 MAGEB6P1A0A0J9YX57 407 aa24.72■■□□□ 1.55
SHISA4-201ENST00000362011 MBD4O95243 580 aa24.72■■□□□ 1.55
SHISA4-201ENST00000362011 ADGRA1Q86SQ6 560 aa24.72■■□□□ 1.55
SHISA4-201ENST00000362011 TTF2Q9UNY4 1162 aaKnown RBP24.72■■□□□ 1.55
SHISA4-201ENST00000362011 MROH7-TTC4A0A0A0MT08 1334 aa24.71■■□□□ 1.55
SHISA4-201ENST00000362011 PSMD14O00487 310 aa24.71■■□□□ 1.55
SHISA4-201ENST00000362011 VIL1P09327 827 aaKnown RBP24.71■■□□□ 1.55
SHISA4-201ENST00000362011 PTH1RQ03431 593 aa24.71■■□□□ 1.55
SHISA4-201ENST00000362011 CIAPIN1Q6FI81 312 aa24.71■■□□□ 1.55
SHISA4-201ENST00000362011 RSBN1LQ6PCB5 846 aaPredicted RBP24.71■■□□□ 1.55
SHISA4-201ENST00000362011 C22orf23Q9BZE7 217 aa24.71■■□□□ 1.55
SHISA4-201ENST00000362011 GPRC5DQ9NZD1 345 aa24.71■■□□□ 1.55
SHISA4-201ENST00000362011 F8W031 263 aaPredicted RBP24.7■■□□□ 1.54
SHISA4-201ENST00000362011 CXCL9Q07325 125 aa24.7■■□□□ 1.54
SHISA4-201ENST00000362011 DIXDC1Q155Q3 683 aa24.7■■□□□ 1.54
SHISA4-201ENST00000362011 MIGA1Q8NAN2 632 aa24.7■■□□□ 1.54
SHISA4-201ENST00000362011 NOL10Q9BSC4 688 aaKnown RBP24.7■■□□□ 1.54
SHISA4-201ENST00000362011 MCCP23508 829 aa24.69■■□□□ 1.54
SHISA4-201ENST00000362011 TNIP1Q15025 636 aa24.69■■□□□ 1.54
SHISA4-201ENST00000362011 CAPNS2Q96L46 248 aa24.69■■□□□ 1.54
SHISA4-201ENST00000362011 TBC1D32Q96NH3 1257 aa24.69■■□□□ 1.54
SHISA4-201ENST00000362011 DSCC1Q9BVC3 393 aa24.69■■□□□ 1.54
SHISA4-201ENST00000362011 ARMT1Q9H993 441 aa24.69■■□□□ 1.54
SHISA4-201ENST00000362011 ADARB2Q9NS39 739 aaKnown RBP24.69■■□□□ 1.54
SHISA4-201ENST00000362011 PGAP2Q9UHJ9 254 aa24.69■■□□□ 1.54
SHISA4-201ENST00000362011 TLL2Q9Y6L7 1015 aa24.69■■□□□ 1.54
SHISA4-201ENST00000362011 TRPM7Q96QT4 1865 aa24.69■■□□□ 1.54
SHISA4-201ENST00000362011 GAKO14976 1311 aa24.69■■□□□ 1.54
SHISA4-201ENST00000362011 ECE1P42892 770 aa24.68■■□□□ 1.54
SHISA4-201ENST00000362011 KIAA0825Q8IV33 1275 aa24.68■■□□□ 1.54
SHISA4-201ENST00000362011 LCORLQ8N3X6 602 aa24.68■■□□□ 1.54
SHISA4-201ENST00000362011 MAP4K1Q92918 833 aa24.68■■□□□ 1.54
SHISA4-201ENST00000362011 FAM163AQ96GL9 167 aaPredicted RBP24.68■■□□□ 1.54
SHISA4-201ENST00000362011 STRBPQ96SI9 672 aaKnown RBP24.68■■□□□ 1.54
SHISA4-201ENST00000362011 TRAF5O00463 557 aa24.67■■□□□ 1.54
SHISA4-201ENST00000362011 BAG3O95817 575 aa24.67■■□□□ 1.54
SHISA4-201ENST00000362011 HSPD1P10809 573 aaKnown RBP24.67■■□□□ 1.54
SHISA4-201ENST00000362011 GNAT2P19087 354 aa24.67■■□□□ 1.54
SHISA4-201ENST00000362011 DYNLL1P63167 89 aaKnown RBP24.67■■□□□ 1.54
SHISA4-201ENST00000362011 VPS53Q5VIR6 699 aa24.67■■□□□ 1.54
SHISA4-201ENST00000362011 RIOK1Q9BRS2 568 aaKnown RBP24.67■■□□□ 1.54
SHISA4-201ENST00000362011 AATFQ9NY61 560 aaKnown RBP eCLIP24.67■■□□□ 1.54
SHISA4-201ENST00000362011 RBM25P49756 843 aaKnown RBP24.66■■□□□ 1.54
SHISA4-201ENST00000362011 HDLBPQ00341 1268 aaKnown RBP24.66■■□□□ 1.54
SHISA4-201ENST00000362011 CERS3Q8IU89 383 aa24.66■■□□□ 1.54
SHISA4-201ENST00000362011 AGBL3Q8NEM8 1001 aa24.66■■□□□ 1.54
SHISA4-201ENST00000362011 RBM8AQ9Y5S9 174 aaKnown RBP24.66■■□□□ 1.54
SHISA4-201ENST00000362011 U3KPZ7 1027 aaPredicted RBP24.66■■□□□ 1.54
SHISA4-201ENST00000362011 RPAP1Q9BWH6 1393 aaPredicted RBP24.65■■□□□ 1.54
SHISA4-201ENST00000362011 CYP4F22Q6NT55 531 aa24.65■■□□□ 1.54
SHISA4-201ENST00000362011 HHIPL2Q6UWX4 724 aa24.65■■□□□ 1.54
SHISA4-201ENST00000362011 TEKT1Q969V4 418 aa24.65■■□□□ 1.54
SHISA4-201ENST00000362011 ABHD8Q96I13 439 aa24.65■■□□□ 1.54
SHISA4-201ENST00000362011 MRIQ9BWK5 157 aa24.65■■□□□ 1.54
SHISA4-201ENST00000362011 DAGLAQ9Y4D2 1042 aa24.65■■□□□ 1.54
SHISA4-201ENST00000362011 DDX60LQ5H9U9 1706 aaKnown RBP24.64■■□□□ 1.54
SHISA4-201ENST00000362011 GPR75-ASB3A0A0A6YYF3 556 aa24.64■■□□□ 1.54
SHISA4-201ENST00000362011 BTDP43251 543 aa24.64■■□□□ 1.54
SHISA4-201ENST00000362011 CRKP46108 304 aa24.64■■□□□ 1.54
SHISA4-201ENST00000362011 PPP4CP60510 307 aa24.64■■□□□ 1.54
SHISA4-201ENST00000362011 GMLQ99445 158 aa24.64■■□□□ 1.54
SHISA4-201ENST00000362011 CRNKL1Q9BZJ0 848 aaKnown RBP24.64■■□□□ 1.54
SHISA4-201ENST00000362011 HDAC9Q9UKV0 1011 aa24.64■■□□□ 1.54
SHISA4-201ENST00000362011 SLC4A4Q9Y6R1 1079 aa24.64■■□□□ 1.54
SHISA4-201ENST00000362011 PATL2C9JE40 543 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms