RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 ESPNB1AK53 854 aa22.89■■□□□ 1.26
CDC42BPB-201ENST00000361246 TTF2Q9UNY4 1162 aaKnown RBP22.89■■□□□ 1.26
CDC42BPB-201ENST00000361246 IFI16Q16666 785 aaKnown RBP22.89■■□□□ 1.26
CDC42BPB-201ENST00000361246 KIAA0825Q8IV33 1275 aa22.89■■□□□ 1.26
CDC42BPB-201ENST00000361246 KARSQ15046 597 aaKnown RBP22.89■■□□□ 1.25
CDC42BPB-201ENST00000361246 CSADQ9Y600 493 aa22.89■■□□□ 1.25
CDC42BPB-201ENST00000361246 MTERF4Q7Z6M4 381 aaKnown RBP22.89■■□□□ 1.25
CDC42BPB-201ENST00000361246 DACT1Q9NYF0 836 aa22.89■■□□□ 1.25
CDC42BPB-201ENST00000361246 STRN3Q13033 797 aa22.89■■□□□ 1.25
CDC42BPB-201ENST00000361246 BIRC2Q13490 618 aa22.89■■□□□ 1.25
CDC42BPB-201ENST00000361246 ZSCAN23Q3MJ62 389 aa22.89■■□□□ 1.25
CDC42BPB-201ENST00000361246 NEK11Q8NG66 645 aa22.89■■□□□ 1.25
CDC42BPB-201ENST00000361246 MRPS27Q92552 414 aaKnown RBP22.89■■□□□ 1.25
CDC42BPB-201ENST00000361246 FRMD4BQ9Y2L6 1034 aa22.89■■□□□ 1.25
CDC42BPB-201ENST00000361246 SPTLC2O15270 562 aa22.88■■□□□ 1.25
CDC42BPB-201ENST00000361246 PPP1R21Q6ZMI0 780 aa22.88■■□□□ 1.25
CDC42BPB-201ENST00000361246 SLC52A2Q9HAB3 445 aa22.88■■□□□ 1.25
CDC42BPB-201ENST00000361246 NCOA5Q9HCD5 579 aaKnown RBP22.88■■□□□ 1.25
CDC42BPB-201ENST00000361246 AGTPBP1Q9UPW5 1226 aa22.88■■□□□ 1.25
CDC42BPB-201ENST00000361246 MXRA7P84157 204 aa22.88■■□□□ 1.25
CDC42BPB-201ENST00000361246 DBNDD2Q9BQY9 259 aa22.88■■□□□ 1.25
CDC42BPB-201ENST00000361246 TTLL3Q9Y4R7 772 aa22.88■■□□□ 1.25
CDC42BPB-201ENST00000361246 IL16Q14005 1332 aa22.88■■□□□ 1.25
CDC42BPB-201ENST00000361246 IQCGQ9H095 443 aaKnown RBP22.88■■□□□ 1.25
CDC42BPB-201ENST00000361246 TTC12Q9H892 705 aaPredicted RBP22.88■■□□□ 1.25
CDC42BPB-201ENST00000361246 SLC1A4P43007 532 aa22.87■■□□□ 1.25
CDC42BPB-201ENST00000361246 UNC13AQ9UPW8 1703 aa22.87■■□□□ 1.25
CDC42BPB-201ENST00000361246 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.87■■□□□ 1.257e-7■■□□□ 13.2
CDC42BPB-201ENST00000361246 UAP1Q16222 522 aaPredicted RBP22.87■■□□□ 1.25
CDC42BPB-201ENST00000361246 CMTR1Q8N1G2 835 aaKnown RBP22.87■■□□□ 1.25
CDC42BPB-201ENST00000361246 CLSTN2Q9H4D0 955 aa22.87■■□□□ 1.25
CDC42BPB-201ENST00000361246 V9GY48 417 aaPredicted RBP22.87■■□□□ 1.25
CDC42BPB-201ENST00000361246 PSMC4P43686 418 aa22.87■■□□□ 1.25
CDC42BPB-201ENST00000361246 TRPC3Q13507 836 aa22.87■■□□□ 1.25
CDC42BPB-201ENST00000361246 RAB3IL1Q8TBN0 382 aa22.87■■□□□ 1.25
CDC42BPB-201ENST00000361246 METTL22Q9BUU2 404 aaPredicted RBP22.87■■□□□ 1.25
CDC42BPB-201ENST00000361246 BICRAQ9NZM4 1560 aa22.87■■□□□ 1.25
CDC42BPB-201ENST00000361246 RNASE9P60153 205 aaKnown RBP22.87■■□□□ 1.25
CDC42BPB-201ENST00000361246 DAPK3O43293 454 aa22.86■■□□□ 1.25
CDC42BPB-201ENST00000361246 LPXNO60711 386 aa22.86■■□□□ 1.25
CDC42BPB-201ENST00000361246 TRPM2O94759 1503 aa22.86■■□□□ 1.25
CDC42BPB-201ENST00000361246 CCDC175P0C221 793 aa22.86■■□□□ 1.25
CDC42BPB-201ENST00000361246 M0QZ92 97 aa22.86■■□□□ 1.25
CDC42BPB-201ENST00000361246 DCPSQ96C86 337 aaKnown RBP22.86■■□□□ 1.25
CDC42BPB-201ENST00000361246 TNNI3KQ59H18 835 aa22.86■■□□□ 1.25
CDC42BPB-201ENST00000361246 PPP1R9BQ96SB3 815 aa22.86■■□□□ 1.25
CDC42BPB-201ENST00000361246 FPGT-TNNI3KV9GXZ4 949 aa22.86■■□□□ 1.25
CDC42BPB-201ENST00000361246 WDR44Q5JSH3 913 aa22.86■■□□□ 1.25
CDC42BPB-201ENST00000361246 ALDH1B1P30837 517 aa22.85■■□□□ 1.25
CDC42BPB-201ENST00000361246 AZI2Q9H6S1 392 aa22.85■■□□□ 1.25
CDC42BPB-201ENST00000361246 RBM28Q9NW13 759 aaKnown RBP22.85■■□□□ 1.25
CDC42BPB-201ENST00000361246 CTTNBP2Q8WZ74 1663 aa22.85■■□□□ 1.25
CDC42BPB-201ENST00000361246 NCAPG2Q86XI2 1143 aa22.85■■□□□ 1.25
CDC42BPB-201ENST00000361246 IFT74Q96LB3 600 aa22.85■■□□□ 1.25
CDC42BPB-201ENST00000361246 RUFY3Q7L099 469 aa22.85■■□□□ 1.25
CDC42BPB-201ENST00000361246 SELENOOQ9BVL4 669 aa22.85■■□□□ 1.25
CDC42BPB-201ENST00000361246 CLRN2A0PK11 232 aa22.85■■□□□ 1.25
CDC42BPB-201ENST00000361246 SV2BQ7L1I2 683 aa22.85■■□□□ 1.25
CDC42BPB-201ENST00000361246 DYMQ7RTS9 669 aa22.85■■□□□ 1.25
CDC42BPB-201ENST00000361246 RPRD2Q5VT52 1461 aaKnown RBP22.84■■□□□ 1.25
CDC42BPB-201ENST00000361246 TESPA1A2RU30 521 aaPredicted RBP22.84■■□□□ 1.25
CDC42BPB-201ENST00000361246 TRAF5O00463 557 aa22.84■■□□□ 1.25
CDC42BPB-201ENST00000361246 CYLC1P35663 651 aaPredicted RBP22.84■■□□□ 1.25
CDC42BPB-201ENST00000361246 ODF2LQ9ULJ1 636 aa22.84■■□□□ 1.25
CDC42BPB-201ENST00000361246 PHKBQ93100 1093 aa22.84■■□□□ 1.25
CDC42BPB-201ENST00000361246 A0A1B0GVL5 298 aa22.84■■□□□ 1.25
CDC42BPB-201ENST00000361246 VAMP4O75379 141 aa22.84■■□□□ 1.25
CDC42BPB-201ENST00000361246 IGBP1P78318 339 aa22.84■■□□□ 1.25
CDC42BPB-201ENST00000361246 PARP10Q53GL7 1025 aa22.84■■□□□ 1.25
CDC42BPB-201ENST00000361246 MCM3P25205 808 aa22.84■■□□□ 1.25
CDC42BPB-201ENST00000361246 SUCLG2Q96I99 432 aa22.84■■□□□ 1.25
CDC42BPB-201ENST00000361246 RALGAPBQ86X10 1494 aa22.84■■□□□ 1.25
CDC42BPB-201ENST00000361246 HSF2BPO75031 334 aa22.84■■□□□ 1.25
CDC42BPB-201ENST00000361246 GSDMDP57764 484 aa22.84■■□□□ 1.25
CDC42BPB-201ENST00000361246 FAM227BQ96M60 508 aa22.84■■□□□ 1.25
CDC42BPB-201ENST00000361246 GUCA1BQ9UMX6 200 aa22.83■■□□□ 1.25
CDC42BPB-201ENST00000361246 KIF21AQ7Z4S6 1674 aa22.83■■□□□ 1.25
CDC42BPB-201ENST00000361246 SUPT20HQ8NEM7 779 aa22.83■■□□□ 1.25
CDC42BPB-201ENST00000361246 FAM200AQ8TCP9 573 aa22.83■■□□□ 1.25
CDC42BPB-201ENST00000361246 CARD14Q9BXL6 1004 aa22.83■■□□□ 1.25
CDC42BPB-201ENST00000361246 DDX21Q9NR30 783 aaKnown RBP eCLIP22.83■■□□□ 1.25
CDC42BPB-201ENST00000361246 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.83■■□□□ 1.25
CDC42BPB-201ENST00000361246 GPAA1O43292 621 aa22.83■■□□□ 1.25
CDC42BPB-201ENST00000361246 SESTD1Q86VW0 696 aa22.83■■□□□ 1.25
CDC42BPB-201ENST00000361246 DDX23Q9BUQ8 820 aaKnown RBP22.83■■□□□ 1.25
CDC42BPB-201ENST00000361246 RLBP1P12271 317 aa22.83■■□□□ 1.24
CDC42BPB-201ENST00000361246 PDE6BP35913 854 aa22.83■■□□□ 1.24
CDC42BPB-201ENST00000361246 ZAP70P43403 619 aa22.83■■□□□ 1.24
CDC42BPB-201ENST00000361246 ARHGEF35A5YM69 484 aa22.83■■□□□ 1.24
CDC42BPB-201ENST00000361246 KIF22Q14807 665 aa22.83■■□□□ 1.24
CDC42BPB-201ENST00000361246 UTP14CQ5TAP6 766 aaKnown RBP22.83■■□□□ 1.24
CDC42BPB-201ENST00000361246 SELENOSQ9BQE4 189 aa22.83■■□□□ 1.24
CDC42BPB-201ENST00000361246 Q3C1V9 767 aa22.82■■□□□ 1.24
CDC42BPB-201ENST00000361246 KMT5BQ4FZB7 885 aa22.82■■□□□ 1.24
CDC42BPB-201ENST00000361246 SPATA5Q8NB90 893 aa22.82■■□□□ 1.24
CDC42BPB-201ENST00000361246 RDH13Q8NBN7 331 aa22.82■■□□□ 1.24
CDC42BPB-201ENST00000361246 ATP6V0A2Q9Y487 856 aa22.82■■□□□ 1.24
CDC42BPB-201ENST00000361246 OTUD7BQ6GQQ9 843 aa22.82■■□□□ 1.24
CDC42BPB-201ENST00000361246 LZTFL1Q9NQ48 299 aa22.82■■□□□ 1.24
CDC42BPB-201ENST00000361246 BMP15O95972 392 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms