RNA–Protein interactions for RNA: ENST00000359972.6

APAF1-203, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 7,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-203ENST00000359972 SLF1Q9BQI6 1058 aa16.91■□□□□ 0.3
APAF1-203ENST00000359972 FAM204AQ9H8W3 233 aa16.91■□□□□ 0.3
APAF1-203ENST00000359972 KLHL14Q9P2G3 628 aa16.91■□□□□ 0.3
APAF1-203ENST00000359972 GAS8O95995 478 aa16.91■□□□□ 0.3
APAF1-203ENST00000359972 IFIT5Q13325 482 aaKnown RBP16.91■□□□□ 0.3
APAF1-203ENST00000359972 IMPACTQ9P2X3 320 aa16.91■□□□□ 0.3
APAF1-203ENST00000359972 MAPK8IP1Q9UQF2 711 aa16.91■□□□□ 0.3
APAF1-203ENST00000359972 PTPRCP08575 1304 aa16.91■□□□□ 0.3
APAF1-203ENST00000359972 JARID2Q92833 1246 aaPredicted RBP16.91■□□□□ 0.3
APAF1-203ENST00000359972 MTMR3Q13615 1198 aa16.9■□□□□ 0.3
APAF1-203ENST00000359972 IFIT1BQ5T764 474 aaKnown RBP16.9■□□□□ 0.3
APAF1-203ENST00000359972 ASIC3Q9UHC3 531 aa16.9■□□□□ 0.3
APAF1-203ENST00000359972 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.9■□□□□ 0.3
APAF1-203ENST00000359972 ELP1O95163 1332 aa16.9■□□□□ 0.3
APAF1-203ENST00000359972 PTPDC1A2A3K4 754 aa16.9■□□□□ 0.3
APAF1-203ENST00000359972 SERPINB6P35237 376 aa16.9■□□□□ 0.3
APAF1-203ENST00000359972 BIRC2Q13490 618 aa16.9■□□□□ 0.3
APAF1-203ENST00000359972 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
APAF1-203ENST00000359972 ZNF500O60304 480 aaPredicted RBP16.9■□□□□ 0.3
APAF1-203ENST00000359972 SPATS2Q86XZ4 545 aaKnown RBP16.9■□□□□ 0.3
APAF1-203ENST00000359972 RGS16O15492 202 aaPredicted RBP16.9■□□□□ 0.3
APAF1-203ENST00000359972 RANBP1P43487 201 aa16.9■□□□□ 0.3
APAF1-203ENST00000359972 CFAP61Q8NHU2 1237 aa16.9■□□□□ 0.3
APAF1-203ENST00000359972 CLSTN2Q9H4D0 955 aa16.9■□□□□ 0.3
APAF1-203ENST00000359972 FAN1Q9Y2M0 1017 aa16.9■□□□□ 0.3
APAF1-203ENST00000359972 MAP3K2Q9Y2U5 619 aa16.9■□□□□ 0.3
APAF1-203ENST00000359972 TRIM75PA6NK02 468 aa16.9■□□□□ 0.3
APAF1-203ENST00000359972 PPP2R5CQ13362 524 aa16.9■□□□□ 0.3
APAF1-203ENST00000359972 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.9■□□□□ 0.3
APAF1-203ENST00000359972 FAM212AQ96EL1 285 aa16.9■□□□□ 0.3
APAF1-203ENST00000359972 ERMNQ8TAM6 284 aa16.89■□□□□ 0.29
APAF1-203ENST00000359972 ZC4H2Q9NQZ6 224 aa16.89■□□□□ 0.29
APAF1-203ENST00000359972 RXRAP19793 462 aa16.89■□□□□ 0.29
APAF1-203ENST00000359972 NMIQ13287 307 aaPredicted RBP16.89■□□□□ 0.29
APAF1-203ENST00000359972 Q9H521 79 aa16.89■□□□□ 0.29
APAF1-203ENST00000359972 ANLNQ9NQW6 1124 aa16.89■□□□□ 0.29
APAF1-203ENST00000359972 LARSQ9P2J5 1176 aaKnown RBP16.89■□□□□ 0.29
APAF1-203ENST00000359972 POLD1P28340 1107 aa16.89■□□□□ 0.29
APAF1-203ENST00000359972 PPP1R1BQ9UD71 204 aaPredicted RBP16.89■□□□□ 0.29
APAF1-203ENST00000359972 KRT5P13647 590 aa16.89■□□□□ 0.29
APAF1-203ENST00000359972 KRT9P35527 623 aa16.89■□□□□ 0.29
APAF1-203ENST00000359972 KRT2P35908 639 aa16.89■□□□□ 0.29
APAF1-203ENST00000359972 TBC1D8BQ0IIM8 1120 aa16.89■□□□□ 0.29
APAF1-203ENST00000359972 FAM71BQ8TC56 605 aa16.89■□□□□ 0.29
APAF1-203ENST00000359972 TBC1D8O95759 1140 aa16.89■□□□□ 0.29
APAF1-203ENST00000359972 ASIC2Q16515 512 aa16.89■□□□□ 0.29
APAF1-203ENST00000359972 CPA1P15085 419 aa16.88■□□□□ 0.29
APAF1-203ENST00000359972 ADKP55263 362 aaKnown RBP16.88■□□□□ 0.29
APAF1-203ENST00000359972 PHEXP78562 749 aa16.88■□□□□ 0.29
APAF1-203ENST00000359972 TCP11Q8WWU5 503 aa16.88■□□□□ 0.29
APAF1-203ENST00000359972 TRIM14Q14142 442 aa16.88■□□□□ 0.29
APAF1-203ENST00000359972 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.88■□□□□ 0.29
APAF1-203ENST00000359972 IRX4P78413 519 aa16.88■□□□□ 0.29
APAF1-203ENST00000359972 KCTD16Q68DU8 428 aa16.88■□□□□ 0.29
APAF1-203ENST00000359972 SYNRGQ9UMZ2 1314 aa16.88■□□□□ 0.29
APAF1-203ENST00000359972 TROVE2P10155 538 aaKnown RBP eCLIP16.88■□□□□ 0.29
APAF1-203ENST00000359972 LRMPQ12912 555 aa16.88■□□□□ 0.29
APAF1-203ENST00000359972 PPP2R5DQ14738 602 aa16.88■□□□□ 0.29
APAF1-203ENST00000359972 CFAP221Q4G0U5 840 aa16.88■□□□□ 0.29
APAF1-203ENST00000359972 PDZD8Q8NEN9 1154 aa16.88■□□□□ 0.29
APAF1-203ENST00000359972 SPDL1Q96EA4 605 aa16.88■□□□□ 0.29
APAF1-203ENST00000359972 TAF11Q15544 211 aa16.87■□□□□ 0.29
APAF1-203ENST00000359972 TOM1L2Q6ZVM7 507 aa16.87■□□□□ 0.29
APAF1-203ENST00000359972 ANKIB1Q9P2G1 1089 aa16.87■□□□□ 0.29
APAF1-203ENST00000359972 PDE4BQ07343 736 aa16.87■□□□□ 0.29
APAF1-203ENST00000359972 RHPN1Q8TCX5 695 aa16.87■□□□□ 0.29
APAF1-203ENST00000359972 RAD50Q92878 1312 aa16.87■□□□□ 0.29
APAF1-203ENST00000359972 DTNBO60941 627 aa16.87■□□□□ 0.29
APAF1-203ENST00000359972 APOEP02649 317 aa16.87■□□□□ 0.29
APAF1-203ENST00000359972 INPP1P49441 399 aa16.87■□□□□ 0.29
APAF1-203ENST00000359972 HVCN1Q96D96 273 aa16.87■□□□□ 0.29
APAF1-203ENST00000359972 CALM1P0DP23 149 aa16.87■□□□□ 0.29
APAF1-203ENST00000359972 CALM2P0DP24 149 aa16.87■□□□□ 0.29
APAF1-203ENST00000359972 CALM3P0DP25 149 aa16.87■□□□□ 0.29
APAF1-203ENST00000359972 RPGRQ92834 1020 aaKnown RBP16.87■□□□□ 0.29
APAF1-203ENST00000359972 BICC1Q9H694 974 aaKnown RBP16.87■□□□□ 0.29
APAF1-203ENST00000359972 NCOA2Q15596 1464 aa16.87■□□□□ 0.29
APAF1-203ENST00000359972 TNFAIP3P21580 790 aa16.87■□□□□ 0.29
APAF1-203ENST00000359972 CCDC13Q8IYE1 715 aa16.87■□□□□ 0.29
APAF1-203ENST00000359972 ARHGAP6O43182 974 aa16.86■□□□□ 0.29
APAF1-203ENST00000359972 TSC22D3Q99576 134 aa16.86■□□□□ 0.29
APAF1-203ENST00000359972 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.86■□□□□ 0.29
APAF1-203ENST00000359972 LOC102724159A0A0B4J2E5 919 aa16.86■□□□□ 0.29
APAF1-203ENST00000359972 PDE6BP35913 854 aa16.86■□□□□ 0.29
APAF1-203ENST00000359972 PWP2Q15269 919 aaKnown RBP16.86■□□□□ 0.29
APAF1-203ENST00000359972 USP37Q86T82 979 aa16.86■□□□□ 0.29
APAF1-203ENST00000359972 UBL4BQ8N7F7 174 aa16.86■□□□□ 0.29
APAF1-203ENST00000359972 VPS37BQ9H9H4 285 aa16.86■□□□□ 0.29
APAF1-203ENST00000359972 USHBP1Q8N6Y0 703 aa16.86■□□□□ 0.29
APAF1-203ENST00000359972 VWA3AA6NCI4 1184 aa16.86■□□□□ 0.29
APAF1-203ENST00000359972 CCDC105Q8IYK2 499 aa16.86■□□□□ 0.29
APAF1-203ENST00000359972 DESI2Q9BSY9 194 aa16.86■□□□□ 0.29
APAF1-203ENST00000359972 CREB3L3Q68CJ9 461 aa16.85■□□□□ 0.29
APAF1-203ENST00000359972 MCTP2Q6DN12 878 aa16.85■□□□□ 0.29
APAF1-203ENST00000359972 INTS4Q96HW7 963 aaKnown RBP16.85■□□□□ 0.29
APAF1-203ENST00000359972 CSRNP2Q9H175 543 aa16.85■□□□□ 0.29
APAF1-203ENST00000359972 EFCAB8A8MWE9 144 aa16.85■□□□□ 0.29
APAF1-203ENST00000359972 MCMDC2Q4G0Z9 681 aa16.85■□□□□ 0.29
APAF1-203ENST00000359972 USP26Q9BXU7 913 aa16.85■□□□□ 0.29
APAF1-203ENST00000359972 LMBRD1Q9NUN5 540 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms