RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 ADAM21Q9UKJ8 722 aa11.42□□□□□ -0.58
RNF40-202ENST00000357890 RNF187Q5TA31 235 aaPredicted RBP11.42□□□□□ -0.58
RNF40-202ENST00000357890 NSUN7Q8NE18 718 aaKnown RBP11.42□□□□□ -0.58
RNF40-202ENST00000357890 IFIT5Q13325 482 aaKnown RBP11.42□□□□□ -0.58
RNF40-202ENST00000357890 PPM1EQ8WY54 764 aa11.42□□□□□ -0.58
RNF40-202ENST00000357890 CYP27B1O15528 508 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 PFKFB2O60825 505 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 WDHD1O75717 1129 aaPredicted RBP11.41□□□□□ -0.58
RNF40-202ENST00000357890 A1BGP04217 495 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 ZFYP08048 801 aaPredicted RBP11.41□□□□□ -0.58
RNF40-202ENST00000357890 SYKP43405 635 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 PLA2G4DQ86XP0 818 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 MRFAP1L1Q96HT8 127 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 DESI2Q9BSY9 194 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 LCMT1Q9UIC8 334 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 LRRC37A3O60309 1634 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 ACTN2P35609 894 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 METTL24Q5JXM2 366 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 USPL1Q5W0Q7 1092 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 NBPF11Q86T75 865 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 NCOA7Q8NI08 942 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 DCCP43146 1447 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 HSPD1P10809 573 aaKnown RBP11.41□□□□□ -0.58
RNF40-202ENST00000357890 RABL6Q3YEC7 729 aaPredicted RBP11.41□□□□□ -0.58
RNF40-202ENST00000357890 WWC2Q6AWC2 1192 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 ATL3Q6DD88 541 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 CCDC70Q6NSX1 233 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 TTLL7Q6ZT98 887 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 PCDHA7Q9UN72 937 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 TBC1D2BQ9UPU7 963 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 TCHHQ07283 1943 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 HEG1Q9ULI3 1381 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 MAP2K2P36507 400 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 PLA2G4AP47712 749 aa11.41□□□□□ -0.58
RNF40-202ENST00000357890 TSR1Q2NL82 804 aaKnown RBP11.41□□□□□ -0.58
RNF40-202ENST00000357890 SHTN1A0MZ66 631 aa11.4□□□□□ -0.58
RNF40-202ENST00000357890 TOM1O60784 492 aa11.4□□□□□ -0.58
RNF40-202ENST00000357890 CNNM3Q8NE01 707 aa11.4□□□□□ -0.58
RNF40-202ENST00000357890 GPHNQ9NQX3 736 aaPredicted RBP11.4□□□□□ -0.58
RNF40-202ENST00000357890 RCOR1Q9UKL0 485 aa11.4□□□□□ -0.58
RNF40-202ENST00000357890 FAN1Q9Y2M0 1017 aa11.4□□□□□ -0.58
RNF40-202ENST00000357890 PDIA3P30101 505 aaKnown RBP11.4□□□□□ -0.58
RNF40-202ENST00000357890 CDR1P51861 262 aa11.4□□□□□ -0.58
RNF40-202ENST00000357890 NDUFA8P51970 172 aa11.4□□□□□ -0.58
RNF40-202ENST00000357890 ALG1Q9BT22 464 aa11.4□□□□□ -0.58
RNF40-202ENST00000357890 GPR108Q9NPR9 543 aa11.4□□□□□ -0.58
RNF40-202ENST00000357890 SH3TC1Q8TE82 1336 aa11.4□□□□□ -0.59
RNF40-202ENST00000357890 PCDH11XQ9BZA7 1347 aa11.4□□□□□ -0.59
RNF40-202ENST00000357890 PCDH11YQ9BZA8 1340 aa11.4□□□□□ -0.59
RNF40-202ENST00000357890 NFAT5O94916 1531 aa11.4□□□□□ -0.59
RNF40-202ENST00000357890 CDKL5O76039 1030 aa11.4□□□□□ -0.59
RNF40-202ENST00000357890 METAP2P50579 478 aaKnown RBP eCLIP11.4□□□□□ -0.59
RNF40-202ENST00000357890 FANCCQ00597 558 aa11.4□□□□□ -0.59
RNF40-202ENST00000357890 FKBP15Q5T1M5 1219 aa11.4□□□□□ -0.59
RNF40-202ENST00000357890 HDXQ7Z353 690 aa11.4□□□□□ -0.59
RNF40-202ENST00000357890 PCMTD1Q96MG8 357 aaPredicted RBP11.4□□□□□ -0.59
RNF40-202ENST00000357890 TMOD3Q9NYL9 352 aa11.4□□□□□ -0.59
RNF40-202ENST00000357890 RFX7Q2KHR2 1363 aa11.4□□□□□ -0.59
RNF40-202ENST00000357890 ERICH2A1L162 156 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 ZNF202O95125 648 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 RFX5P48382 616 aaPredicted RBP11.39□□□□□ -0.59
RNF40-202ENST00000357890 CHMP4BP1P59074 171 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 LONRF2Q1L5Z9 754 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 RGS22Q8NE09 1264 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 NUP133Q8WUM0 1156 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 HINFPQ9BQA5 517 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 GJB4Q9NTQ9 266 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 ZNF446Q9NWS9 450 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 TULP1O00294 542 aaPredicted RBP11.39□□□□□ -0.59
RNF40-202ENST00000357890 STARD3NLO95772 234 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 MYCNP04198 464 aaPredicted RBP11.39□□□□□ -0.59
RNF40-202ENST00000357890 GPTP24298 496 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 DPCR1Q3MIW9 517 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 LRRC24Q50LG9 513 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 ZMYM1Q5SVZ6 1142 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 FBXO18Q8NFZ0 1043 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 PARD6BQ9BYG5 372 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 GBP3Q9H0R5 595 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 GOLPH3LQ9H4A5 285 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 KIAA1468Q9P260 1216 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 FHOD1Q9Y613 1164 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 C1orf167Q5SNV9 1468 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 H7C1W4 665 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 ZNF569Q5MCW4 686 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 LDHAL6AQ6ZMR3 332 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 RASSF8Q8NHQ8 419 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 CLIC4Q9Y696 253 aa11.39□□□□□ -0.59
RNF40-202ENST00000357890 EFCAB8A8MWE9 144 aa11.38□□□□□ -0.59
RNF40-202ENST00000357890 ATP2C2O75185 946 aa11.38□□□□□ -0.59
RNF40-202ENST00000357890 IPO7O95373 1038 aaKnown RBP11.38□□□□□ -0.59
RNF40-202ENST00000357890 ADALQ6DHV7 355 aa11.38□□□□□ -0.59
RNF40-202ENST00000357890 SRLQ86TD4 932 aa11.38□□□□□ -0.59
RNF40-202ENST00000357890 CEP57Q86XR8 500 aa11.38□□□□□ -0.59
RNF40-202ENST00000357890 AIDAQ96BJ3 306 aa11.38□□□□□ -0.59
RNF40-202ENST00000357890 ZNF274Q96GC6 653 aaPredicted RBP11.38□□□□□ -0.59
RNF40-202ENST00000357890 EBAG9O00559 213 aa11.38□□□□□ -0.59
RNF40-202ENST00000357890 IARSP41252 1262 aaKnown RBP11.38□□□□□ -0.59
RNF40-202ENST00000357890 TICAM2Q86XR7 235 aa11.38□□□□□ -0.59
RNF40-202ENST00000357890 EIF3CLB5ME19 914 aaKnown RBP11.38□□□□□ -0.59
RNF40-202ENST00000357890 SLC9C2Q5TAH2 1124 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms