RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 KRT79Q5XKE5 535 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 CPLX4Q7Z7G2 160 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 USP28Q96RU2 1077 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 NDUFB9Q9Y6M9 179 aa17.61■□□□□ 0.41
TRAPPC11-202ENST00000357207 MAGI3Q5TCQ9 1506 aa17.6■□□□□ 0.41
TRAPPC11-202ENST00000357207 OAS2P29728 719 aaKnown RBP17.6■□□□□ 0.41
TRAPPC11-202ENST00000357207 KRT9P35527 623 aa17.6■□□□□ 0.41
TRAPPC11-202ENST00000357207 KRT40Q6A162 431 aa17.6■□□□□ 0.41
TRAPPC11-202ENST00000357207 CYP26C1Q6V0L0 522 aa17.6■□□□□ 0.41
TRAPPC11-202ENST00000357207 DCAF5Q96JK2 942 aa17.6■□□□□ 0.41
TRAPPC11-202ENST00000357207 LGR6Q9HBX8 967 aa17.6■□□□□ 0.41
TRAPPC11-202ENST00000357207 CTNNA2P26232 953 aa17.6■□□□□ 0.41
TRAPPC11-202ENST00000357207 CEP57Q86XR8 500 aa17.6■□□□□ 0.41
TRAPPC11-202ENST00000357207 LRRC8AQ8IWT6 810 aa17.6■□□□□ 0.41
TRAPPC11-202ENST00000357207 TBC1D5Q92609 795 aa17.6■□□□□ 0.41
TRAPPC11-202ENST00000357207 C6orf50Q9HD87 102 aa17.6■□□□□ 0.41
TRAPPC11-202ENST00000357207 MYSM1Q5VVJ2 828 aa17.6■□□□□ 0.41
TRAPPC11-202ENST00000357207 ZNF790Q6PG37 636 aa17.6■□□□□ 0.41
TRAPPC11-202ENST00000357207 CCDC114Q96M63 670 aa17.6■□□□□ 0.41
TRAPPC11-202ENST00000357207 KAT6BQ8WYB5 2073 aa17.59■□□□□ 0.41
TRAPPC11-202ENST00000357207 GPAA1O43292 621 aa17.59■□□□□ 0.41
TRAPPC11-202ENST00000357207 MBD4O95243 580 aa17.59■□□□□ 0.41
TRAPPC11-202ENST00000357207 TNNC1P63316 161 aa17.59■□□□□ 0.41
TRAPPC11-202ENST00000357207 ANKS4BQ8N8V4 417 aa17.59■□□□□ 0.41
TRAPPC11-202ENST00000357207 STAP2Q9UGK3 403 aa17.59■□□□□ 0.41
TRAPPC11-202ENST00000357207 PLIN2Q99541 437 aa17.59■□□□□ 0.41
TRAPPC11-202ENST00000357207 KDM5DQ9BY66 1539 aa17.59■□□□□ 0.41
TRAPPC11-202ENST00000357207 ATP5JP18859 108 aa17.59■□□□□ 0.41
TRAPPC11-202ENST00000357207 PRPHP41219 470 aa17.59■□□□□ 0.41
TRAPPC11-202ENST00000357207 C6orf229H3BNL8 230 aa17.58■□□□□ 0.41
TRAPPC11-202ENST00000357207 RASEFQ8IZ41 740 aa17.58■□□□□ 0.41
TRAPPC11-202ENST00000357207 EDC3Q96F86 508 aaKnown RBP17.58■□□□□ 0.41
TRAPPC11-202ENST00000357207 RASAL2Q9UJF2 1139 aa17.58■□□□□ 0.41
TRAPPC11-202ENST00000357207 GPR161Q8N6U8 529 aaKnown RBP17.58■□□□□ 0.41
TRAPPC11-202ENST00000357207 CTNND2Q9UQB3 1225 aa17.58■□□□□ 0.41
TRAPPC11-202ENST00000357207 SYNRGQ9UMZ2 1314 aa17.58■□□□□ 0.4
TRAPPC11-202ENST00000357207 IRS4O14654 1257 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC11-202ENST00000357207 GCKRQ14397 625 aa17.58■□□□□ 0.4
TRAPPC11-202ENST00000357207 MSL1Q68DK7 614 aa17.58■□□□□ 0.4
TRAPPC11-202ENST00000357207 TSGA10Q9BZW7 698 aa17.58■□□□□ 0.4
TRAPPC11-202ENST00000357207 NDUFAB1O14561 156 aa17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 POSTNQ15063 836 aa17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 KLHL34Q8N239 644 aa17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 PAF1Q8N7H5 531 aa17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 PLBD2Q8NHP8 589 aa17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 KIAA1524Q8TCG1 905 aa17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 EAF2Q96CJ1 260 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 FAM135BQ49AJ0 1406 aa17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 WDR7Q9Y4E6 1490 aa17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 A0A0D9SFI3 127 aa17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 TLDC2A0PJX2 215 aa17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 FBF1Q8TES7 1133 aa17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 MAPK8IP1Q9UQF2 711 aa17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 E7EWF7 191 aa17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 GSTO1P78417 241 aa17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 TRMT1LQ7Z2T5 733 aaKnown RBP17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 RPGRQ92834 1020 aaKnown RBP17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 PHKBQ93100 1093 aa17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 EHMT1Q9H9B1 1298 aa17.57■□□□□ 0.4
TRAPPC11-202ENST00000357207 KIF4AO95239 1232 aa17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 PPP1R2P41236 205 aa17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 EIF4A1P60842 406 aaKnown RBP17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 B4GALNT4Q76KP1 1039 aa17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 CCDC77Q9BR77 488 aa17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 DSCC1Q9BVC3 393 aa17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 NOC4LQ9BVI4 516 aaKnown RBP17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 STMN4Q9H169 189 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 RBM28Q9NW13 759 aaKnown RBP17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 TRPM2O94759 1503 aa17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 A0A1W2PRG0 241 aa17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 GNA11P29992 359 aa17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 GOLGA6CA6NDK9 693 aa17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 GOLGA6DP0CG33 693 aa17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 KRT13P13646 458 aa17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 ZNF274Q96GC6 653 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 GOLGA6AQ9NYA3 693 aa17.56■□□□□ 0.4
TRAPPC11-202ENST00000357207 SAMD9Q5K651 1589 aa17.55■□□□□ 0.4
TRAPPC11-202ENST00000357207 CADPS2Q86UW7 1296 aa17.55■□□□□ 0.4
TRAPPC11-202ENST00000357207 TDRD7Q8NHU6 1098 aaKnown RBP17.55■□□□□ 0.4
TRAPPC11-202ENST00000357207 PLCD1P51178 756 aa17.55■□□□□ 0.4
TRAPPC11-202ENST00000357207 UNC5CLQ8IV45 518 aa17.55■□□□□ 0.4
TRAPPC11-202ENST00000357207 TRMT44Q8IYL2 757 aaKnown RBP17.55■□□□□ 0.4
TRAPPC11-202ENST00000357207 FAM89AQ96GI7 184 aa17.55■□□□□ 0.4
TRAPPC11-202ENST00000357207 XAGE2Q96GT9 111 aa17.55■□□□□ 0.4
TRAPPC11-202ENST00000357207 MCM9Q9NXL9 1143 aa17.55■□□□□ 0.4
TRAPPC11-202ENST00000357207 MRVI1Q9Y6F6 885 aa17.55■□□□□ 0.4
TRAPPC11-202ENST00000357207 ZSCAN26Q16670 478 aa17.55■□□□□ 0.4
TRAPPC11-202ENST00000357207 C8orf74Q6P047 294 aa17.55■□□□□ 0.4
TRAPPC11-202ENST00000357207 LSG1Q9H089 658 aaKnown RBP17.55■□□□□ 0.4
TRAPPC11-202ENST00000357207 A6NNZ2 444 aa17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 HLA-DOAP06340 250 aa17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 PFKFB1P16118 471 aa17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 PAK1Q13153 545 aa17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 BRD3Q15059 726 aa17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 TUBB8Q3ZCM7 444 aa17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 NRBP1Q9UHY1 535 aa17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 V9GY48 417 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 IRX3P78415 501 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 CSGALNACT2Q8N6G5 542 aa17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 DDX12PQ92771 950 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms