RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 HS2ST1Q7LGA3 356 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 THEMISQ8N1K5 641 aaPredicted RBP7.36□□□□□ -1.23
VPS13B-202ENST00000357162 WHAMMQ8TF30 809 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 EIF3CQ99613 913 aaKnown RBP7.36□□□□□ -1.23
VPS13B-202ENST00000357162 MCTP2Q6DN12 878 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 CLEC17AQ6ZS10 378 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 FBXO3Q9UK99 471 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 ATP2B1P20020 1258 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 BBOF1Q8ND07 529 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 NEK11Q8NG66 645 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 CCDC113Q9H0I3 377 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 LRP2BPQ9P2M1 347 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 BTBD11A6QL63 1104 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 ATF3P18847 181 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 EVA1CP58658 441 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 GALNT17Q6IS24 598 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 RNF10Q8N5U6 811 aaKnown RBP7.36□□□□□ -1.23
VPS13B-202ENST00000357162 TMEM87AQ8NBN3 555 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 PRAM1Q96QH2 718 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.36□□□□□ -1.23
VPS13B-202ENST00000357162 RAD54L2Q9Y4B4 1467 aa7.36□□□□□ -1.23
VPS13B-202ENST00000357162 SLC12A5Q9H2X9 1139 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 KLHL14Q9P2G3 628 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 GOLGA8AA7E2F4 631 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 MAP7D1Q3KQU3 841 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 RGS22Q8NE09 1264 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 MIS12Q9H081 205 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 FOXP2O15409 715 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 ATP5HO75947 161 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 MCMDC2Q4G0Z9 681 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 FERMT3Q86UX7 667 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 RTN1Q16799 776 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 ATP2A3Q93084 1043 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 SCLT1Q96NL6 688 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 CUEDC2Q9H467 287 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 TXLNGQ9NUQ3 528 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 WWC3Q9ULE0 1092 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 PRG4Q92954 1404 aaPredicted RBP7.35□□□□□ -1.23
VPS13B-202ENST00000357162 KRT13P13646 458 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 IL15P40933 162 aaPredicted RBP7.35□□□□□ -1.23
VPS13B-202ENST00000357162 RRP36Q96EU6 259 aaKnown RBP7.35□□□□□ -1.23
VPS13B-202ENST00000357162 IMPG2Q9BZV3 1241 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 RGS12O14924 1447 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 ZBTB43O43298 467 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 STAT6P42226 847 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 RBM6P78332 1123 aaKnown RBP7.35□□□□□ -1.23
VPS13B-202ENST00000357162 CCDC122Q5T0U0 273 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 DZIP1Q86YF9 867 aaKnown RBP7.35□□□□□ -1.23
VPS13B-202ENST00000357162 KIFAP3Q92845 792 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 ARHGEF10O15013 1369 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 C10orf76Q5T2E6 689 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 IGSF22Q8N9C0 903 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 TMEM87BQ96K49 555 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 VPS18Q9P253 973 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 CETN3O15182 167 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 NEBLO76041 1014 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 CREBBPQ92793 2442 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 EIF3BP55884 814 aaKnown RBP7.35□□□□□ -1.23
VPS13B-202ENST00000357162 EMBQ6PCB8 327 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 EXOC6BQ9Y2D4 811 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 HAUS8Q9BT25 410 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 GOPCQ9HD26 462 aa7.35□□□□□ -1.23
VPS13B-202ENST00000357162 DENND2CQ68D51 928 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 UBE4AQ14139 1066 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 ZMAT2Q96NC0 199 aaKnown RBP7.34□□□□□ -1.23
VPS13B-202ENST00000357162 NOP2P46087 812 aaKnown RBP7.34□□□□□ -1.23
VPS13B-202ENST00000357162 BIRC3Q13489 604 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 MMRN2Q9H8L6 949 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 ERCC5P28715 1186 aaPredicted RBP7.34□□□□□ -1.23
VPS13B-202ENST00000357162 NBPF14Q5TI25 921 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 SYNMO15061 1565 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 IKBKBO14920 756 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 C14orf93Q9H972 538 aaKnown RBP7.34□□□□□ -1.23
VPS13B-202ENST00000357162 MAST1Q9Y2H9 1570 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 MACROD2A1Z1Q3 448 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 RNF40O75150 1001 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 KRBA2Q6ZNG9 492 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 SLC17A8Q8NDX2 589 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 RAB3IL1Q8TBN0 382 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 ZNF526Q8TF50 670 aaPredicted RBP7.34□□□□□ -1.23
VPS13B-202ENST00000357162 YEATS2Q9ULM3 1422 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 NUF2Q9BZD4 464 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 CABP1Q9NZU7 370 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 UBXN1Q04323 297 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 STK3Q13188 491 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 TRIM42Q8IWZ5 723 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 BRD1O95696 1058 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 PANK2Q9BZ23 570 aa7.34□□□□□ -1.23
VPS13B-202ENST00000357162 SNCBQ16143 134 aa7.34□□□□□ -1.24
VPS13B-202ENST00000357162 RUFY3Q7L099 469 aa7.34□□□□□ -1.24
VPS13B-202ENST00000357162 ZNF644Q9H582 1327 aaPredicted RBP7.34□□□□□ -1.24
VPS13B-202ENST00000357162 ST5P78524 1137 aa7.34□□□□□ -1.24
VPS13B-202ENST00000357162 MAML3Q96JK9 1138 aa7.34□□□□□ -1.24
VPS13B-202ENST00000357162 PFDN4Q9NQP4 134 aa7.34□□□□□ -1.24
VPS13B-202ENST00000357162 SAR1BQ9Y6B6 198 aa7.34□□□□□ -1.24
VPS13B-202ENST00000357162 PRDM10Q9NQV6 1147 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 LRRD1A4D1F6 860 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 ATP8B2P98198 1209 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 LINS1Q8NG48 757 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 SIL1Q9H173 461 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms