RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 APPP05067 770 aa28.78■■■□□ 2.2
CHKA-202ENST00000356135 RBM5P52756 815 aaKnown RBP eCLIP28.78■■■□□ 2.2
CHKA-202ENST00000356135 RBM8AQ9Y5S9 174 aaKnown RBP28.78■■■□□ 2.2
CHKA-202ENST00000356135 BAG3O95817 575 aa28.78■■■□□ 2.2
CHKA-202ENST00000356135 PPP4CP60510 307 aa28.78■■■□□ 2.2
CHKA-202ENST00000356135 HHIPL2Q6UWX4 724 aa28.78■■■□□ 2.2
CHKA-202ENST00000356135 USP17L8P0C7I0 530 aa28.77■■■□□ 2.2
CHKA-202ENST00000356135 GMPSP49915 693 aaPredicted RBP28.77■■■□□ 2.2
CHKA-202ENST00000356135 APOBEC3HQ6NTF7 200 aaKnown RBP28.77■■■□□ 2.2
CHKA-202ENST00000356135 NOL10Q9BSC4 688 aaKnown RBP28.77■■■□□ 2.2
CHKA-202ENST00000356135 DSCC1Q9BVC3 393 aa28.77■■■□□ 2.2
CHKA-202ENST00000356135 GSG1L2A8MUP6 293 aa28.76■■■□□ 2.19
CHKA-202ENST00000356135 PATL2C9JE40 543 aaKnown RBP28.76■■■□□ 2.19
CHKA-202ENST00000356135 MRIQ9BWK5 157 aa28.76■■■□□ 2.19
CHKA-202ENST00000356135 SERPINA10Q9UK55 444 aa28.76■■■□□ 2.19
CHKA-202ENST00000356135 HDLBPQ00341 1268 aaKnown RBP28.75■■■□□ 2.19
CHKA-202ENST00000356135 CFAP100Q494V2 611 aa28.75■■■□□ 2.19
CHKA-202ENST00000356135 FGAP02671 866 aa28.75■■■□□ 2.19
CHKA-202ENST00000356135 RBM25P49756 843 aaKnown RBP28.75■■■□□ 2.19
CHKA-202ENST00000356135 RHBDL3P58872 404 aa28.75■■■□□ 2.19
CHKA-202ENST00000356135 OGFOD1Q8N543 542 aa28.75■■■□□ 2.19
CHKA-202ENST00000356135 ZDHHC15Q96MV8 337 aa28.75■■■□□ 2.19
CHKA-202ENST00000356135 EPB41L4AQ9HCS5 686 aaPredicted RBP28.75■■■□□ 2.19
CHKA-202ENST00000356135 PALD1Q9ULE6 856 aa28.75■■■□□ 2.19
CHKA-202ENST00000356135 NECTIN1Q15223 517 aa28.74■■■□□ 2.19
CHKA-202ENST00000356135 IFNL3Q8IZI9 196 aa28.74■■■□□ 2.19
CHKA-202ENST00000356135 HDAC9Q9UKV0 1011 aa28.74■■■□□ 2.19
CHKA-202ENST00000356135 DDNO94850 711 aaPredicted RBP28.73■■■□□ 2.19
CHKA-202ENST00000356135 GNAT2P19087 354 aa28.73■■■□□ 2.19
CHKA-202ENST00000356135 HSPA4P34932 840 aa28.73■■■□□ 2.19
CHKA-202ENST00000356135 PRMT6Q96LA8 375 aaPredicted RBP28.73■■■□□ 2.19
CHKA-202ENST00000356135 CRNKL1Q9BZJ0 848 aaKnown RBP28.73■■■□□ 2.19
CHKA-202ENST00000356135 USP40Q9NVE5 1235 aa28.73■■■□□ 2.19
CHKA-202ENST00000356135 RPS12P25398 132 aaKnown RBP28.72■■■□□ 2.19
CHKA-202ENST00000356135 CDC42EP5Q6NZY7 148 aa28.72■■■□□ 2.19
CHKA-202ENST00000356135 GPC2Q8N158 579 aa28.72■■■□□ 2.19
CHKA-202ENST00000356135 TAF6LQ9Y6J9 622 aa28.72■■■□□ 2.19
CHKA-202ENST00000356135 U3KPZ7 1027 aaPredicted RBP28.72■■■□□ 2.19
CHKA-202ENST00000356135 TIAM2Q8IVF5 1701 aa28.72■■■□□ 2.19
CHKA-202ENST00000356135 EPB41L2O43491 1005 aaKnown RBP28.71■■■□□ 2.19
CHKA-202ENST00000356135 CREB3L3Q68CJ9 461 aa28.71■■■□□ 2.19
CHKA-202ENST00000356135 TGFBRAP1Q8WUH2 860 aa28.71■■■□□ 2.19
CHKA-202ENST00000356135 CNOT7Q9UIV1 285 aaKnown RBP28.71■■■□□ 2.19
CHKA-202ENST00000356135 MICALL2Q8IY33 904 aa28.7■■■□□ 2.19
CHKA-202ENST00000356135 TEX11Q8IYF3 940 aa28.7■■■□□ 2.19
CHKA-202ENST00000356135 RASEFQ8IZ41 740 aa28.7■■■□□ 2.19
CHKA-202ENST00000356135 SLC27A2O14975 620 aa28.7■■■□□ 2.18
CHKA-202ENST00000356135 RBM26Q5T8P6 1007 aaKnown RBP28.7■■■□□ 2.18
CHKA-202ENST00000356135 DPF2Q92785 391 aa28.7■■■□□ 2.18
CHKA-202ENST00000356135 TDRD3Q9H7E2 651 aaKnown RBP28.7■■■□□ 2.18
CHKA-202ENST00000356135 EGFRP00533 1210 aa28.69■■■□□ 2.18
CHKA-202ENST00000356135 MCCP23508 829 aa28.69■■■□□ 2.18
CHKA-202ENST00000356135 USP5P45974 858 aa28.69■■■□□ 2.18
CHKA-202ENST00000356135 DLGAP5Q15398 846 aa28.69■■■□□ 2.18
CHKA-202ENST00000356135 NAPBQ9H115 298 aa28.69■■■□□ 2.18
CHKA-202ENST00000356135 MYOZ2Q9NPC6 264 aa28.69■■■□□ 2.18
CHKA-202ENST00000356135 CYP21A2P08686 494 aa28.68■■■□□ 2.18
CHKA-202ENST00000356135 TDO2P48775 406 aa28.68■■■□□ 2.18
CHKA-202ENST00000356135 CACNB3P54284 484 aa28.68■■■□□ 2.18
CHKA-202ENST00000356135 HAND2P61296 217 aa28.68■■■□□ 2.18
CHKA-202ENST00000356135 MAPKAPK5Q8IW41 473 aa28.68■■■□□ 2.18
CHKA-202ENST00000356135 DCP1AQ9NPI6 582 aaPredicted RBP28.68■■■□□ 2.18
CHKA-202ENST00000356135 PLCG2P16885 1265 aa28.67■■■□□ 2.18
CHKA-202ENST00000356135 ZNF280AP59817 542 aaPredicted RBP28.67■■■□□ 2.18
CHKA-202ENST00000356135 ALX1Q15699 326 aa28.67■■■□□ 2.18
CHKA-202ENST00000356135 SAMD7Q7Z3H4 446 aa28.67■■■□□ 2.18
CHKA-202ENST00000356135 KIF2CQ99661 725 aa28.67■■■□□ 2.18
CHKA-202ENST00000356135 SPDYE2BA6NHP3 402 aa28.67■■■□□ 2.18
CHKA-202ENST00000356135 SPDYE6P0CI01 402 aa28.67■■■□□ 2.18
CHKA-202ENST00000356135 NACAP1Q9BZK3 213 aa28.67■■■□□ 2.18
CHKA-202ENST00000356135 SNX14Q9Y5W7 946 aa28.67■■■□□ 2.18
CHKA-202ENST00000356135 SMIM22K7EJ46 135 aa28.66■■■□□ 2.18
CHKA-202ENST00000356135 WDHD1O75717 1129 aaPredicted RBP28.66■■■□□ 2.18
CHKA-202ENST00000356135 PICALMQ13492 652 aa28.66■■■□□ 2.18
CHKA-202ENST00000356135 ATP8A2Q9NTI2 1148 aa28.66■■■□□ 2.18
CHKA-202ENST00000356135 MKRN1Q9UHC7 482 aaKnown RBP28.66■■■□□ 2.18
CHKA-202ENST00000356135 EVX2Q03828 476 aa28.65■■■□□ 2.18
CHKA-202ENST00000356135 NFIAQ12857 509 aa28.65■■■□□ 2.18
CHKA-202ENST00000356135 SLC4A8Q2Y0W8 1093 aa28.65■■■□□ 2.18
CHKA-202ENST00000356135 CERS3Q8IU89 383 aa28.65■■■□□ 2.18
CHKA-202ENST00000356135 DDX4Q9NQI0 724 aaKnown RBP28.65■■■□□ 2.18
CHKA-202ENST00000356135 CTNNA3Q9UI47 895 aa28.65■■■□□ 2.18
CHKA-202ENST00000356135 RPAP1Q9BWH6 1393 aaPredicted RBP28.65■■■□□ 2.18
CHKA-202ENST00000356135 CYP2D7A0A087X1C5 515 aa28.65■■■□□ 2.18
CHKA-202ENST00000356135 NBPF9Q3BBW0 867 aa28.65■■■□□ 2.18
CHKA-202ENST00000356135 TBC1D10BQ4KMP7 808 aaPredicted RBP28.65■■■□□ 2.18
CHKA-202ENST00000356135 KCNB2Q92953 911 aa28.65■■■□□ 2.18
CHKA-202ENST00000356135 GPRC5DQ9NZD1 345 aa28.65■■■□□ 2.18
CHKA-202ENST00000356135 CLRN2A0PK11 232 aa28.64■■■□□ 2.18
CHKA-202ENST00000356135 WNT10BO00744 389 aa28.64■■■□□ 2.18
CHKA-202ENST00000356135 EPS15P42566 896 aa28.64■■■□□ 2.18
CHKA-202ENST00000356135 CTR9Q6PD62 1173 aa28.64■■■□□ 2.18
CHKA-202ENST00000356135 MTMR14Q8NCE2 650 aa28.64■■■□□ 2.18
CHKA-202ENST00000356135 SAP30BPQ9UHR5 308 aaKnown RBP28.64■■■□□ 2.18
CHKA-202ENST00000356135 MINDY4BA8MYZ0 360 aa28.63■■■□□ 2.17
CHKA-202ENST00000356135 USP17L12C9JPN9 530 aa28.63■■■□□ 2.17
CHKA-202ENST00000356135 USP17L21D6R901 530 aa28.63■■■□□ 2.17
CHKA-202ENST00000356135 STK11IPQ8N1F8 1099 aa28.63■■■□□ 2.17
CHKA-202ENST00000356135 ZBED3Q96IU2 234 aaPredicted RBP28.63■■■□□ 2.17
CHKA-202ENST00000356135 MCM9Q9NXL9 1143 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms