RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 FMN2Q9NZ56 1722 aa8.86□□□□□ -0.99
C11orf54-202ENST00000354421 SMPD1P17405 629 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 CASTP20810 708 aaKnown RBP8.85□□□□□ -0.99
C11orf54-202ENST00000354421 KRT85P78386 507 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 HSP90AB2PQ58FF8 381 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 TTC6Q86TZ1 520 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 ALDH8A1Q9H2A2 487 aaPredicted RBP8.85□□□□□ -0.99
C11orf54-202ENST00000354421 CBX8Q9HC52 389 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 PRDM9Q9NQV7 894 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 DDX19AQ9NUU7 478 aaKnown RBP8.85□□□□□ -0.99
C11orf54-202ENST00000354421 CYP46A1Q9Y6A2 500 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 SZT2Q5T011 3432 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 KIF1AQ12756 1690 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 USP6P35125 1406 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 SURF6O75683 361 aaKnown RBP8.85□□□□□ -0.99
C11orf54-202ENST00000354421 GLRX3O76003 335 aaKnown RBP8.85□□□□□ -0.99
C11orf54-202ENST00000354421 PDCP20941 246 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 TRIM32Q13049 653 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 ZSCAN25Q6NSZ9 544 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 CCDC186Q7Z3E2 898 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 PPP1R42Q7Z4L9 355 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 TRIM47Q96LD4 638 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 CLSTN2Q9H4D0 955 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 LRRC4BQ9NT99 713 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 DDX41Q9UJV9 622 aaKnown RBP8.85□□□□□ -0.99
C11orf54-202ENST00000354421 MORC2Q9Y6X9 1032 aaPredicted RBP8.85□□□□□ -0.99
C11orf54-202ENST00000354421 COL6A3P12111 3177 aa8.85□□□□□ -0.99
C11orf54-202ENST00000354421 TERTO14746 1132 aaKnown RBP8.84□□□□□ -0.99
C11orf54-202ENST00000354421 CAVIN2O95810 425 aa8.84□□□□□ -0.99
C11orf54-202ENST00000354421 MAP4K4O95819 1239 aaPredicted RBP8.84□□□□□ -0.99
C11orf54-202ENST00000354421 TNNT1P13805 278 aa8.84□□□□□ -0.99
C11orf54-202ENST00000354421 LIG1P18858 919 aa8.84□□□□□ -0.99
C11orf54-202ENST00000354421 NECTIN1Q15223 517 aa8.84□□□□□ -0.99
C11orf54-202ENST00000354421 ZSCAN1Q8NBB4 408 aa8.84□□□□□ -0.99
C11orf54-202ENST00000354421 JAKMIP1Q96N16 626 aaKnown RBP8.84□□□□□ -0.99
C11orf54-202ENST00000354421 SCAND2PQ9GZW5 306 aaPredicted RBP8.84□□□□□ -0.99
C11orf54-202ENST00000354421 FLT4P35916 1363 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 VPS37CA5D8V6 355 aaPredicted RBP8.83□□□□□ -1
C11orf54-202ENST00000354421 RASSF10A6NK89 507 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 TMEM88BA6NKF7 163 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 NEMFO60524 1076 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 FECHP22830 423 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 MMP16P51512 607 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 FAM193AP78312 1265 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 PTH1RQ03431 593 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 DDB1Q16531 1140 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 ME3Q16798 604 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 DEFB115Q30KQ5 88 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 MSL1Q68DK7 614 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 LARP1Q6PKG0 1096 aaKnown RBP8.83□□□□□ -1
C11orf54-202ENST00000354421 SARM1Q6SZW1 724 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 LUZP1Q86V48 1076 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 TNMDQ9H2S6 317 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 SNRKQ9NRH2 765 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 ACEP12821 1306 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 CPA1P15085 419 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 ADCK5Q3MIX3 580 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 ANO6Q4KMQ2 910 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 LARP1BQ659C4 914 aaKnown RBP8.83□□□□□ -1
C11orf54-202ENST00000354421 PRPF40BQ6NWY9 871 aaKnown RBP8.83□□□□□ -1
C11orf54-202ENST00000354421 CWC27Q6UX04 472 aaKnown RBP8.83□□□□□ -1
C11orf54-202ENST00000354421 MARCH10Q8NA82 808 aaPredicted RBP8.83□□□□□ -1
C11orf54-202ENST00000354421 CCDC112Q8NEF3 446 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 KCND1Q9NSA2 647 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 FAM53CQ9NYF3 392 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 SPG7Q9UQ90 795 aa8.83□□□□□ -1
C11orf54-202ENST00000354421 PKD1L3Q7Z443 1732 aa8.82□□□□□ -1
C11orf54-202ENST00000354421 GNAT3A8MTJ3 354 aa8.82□□□□□ -1
C11orf54-202ENST00000354421 SLFN14P0C7P3 912 aa8.82□□□□□ -1
C11orf54-202ENST00000354421 PSMA5P28066 241 aa8.82□□□□□ -1
C11orf54-202ENST00000354421 LRMPQ12912 555 aa8.82□□□□□ -1
C11orf54-202ENST00000354421 MTX1Q13505 466 aa8.82□□□□□ -1
C11orf54-202ENST00000354421 ANKRD1Q15327 319 aa8.82□□□□□ -1
C11orf54-202ENST00000354421 CHRNA2Q15822 529 aa8.82□□□□□ -1
C11orf54-202ENST00000354421 TPRNQ4KMQ1 711 aa8.82□□□□□ -1
C11orf54-202ENST00000354421 LCE2CQ5TA81 110 aa8.82□□□□□ -1
C11orf54-202ENST00000354421 KIF18AQ8NI77 898 aa8.82□□□□□ -1
C11orf54-202ENST00000354421 TRIM5Q9C035 493 aa8.82□□□□□ -1
C11orf54-202ENST00000354421 RAPGEFL1Q9UHV5 662 aa8.82□□□□□ -1
C11orf54-202ENST00000354421 NRBP1Q9UHY1 535 aa8.82□□□□□ -1
C11orf54-202ENST00000354421 TPCN1Q9ULQ1 816 aa8.82□□□□□ -1
C11orf54-202ENST00000354421 TESPA1A2RU30 521 aaPredicted RBP8.81□□□□□ -1
C11orf54-202ENST00000354421 HIP1O00291 1037 aa8.81□□□□□ -1
C11orf54-202ENST00000354421 SRGAP3O43295 1099 aa8.81□□□□□ -1
C11orf54-202ENST00000354421 ZKSCAN1P17029 563 aaPredicted RBP8.81□□□□□ -1
C11orf54-202ENST00000354421 TAF7Q15545 349 aaPredicted RBP8.81□□□□□ -1
C11orf54-202ENST00000354421 SLFNL1Q499Z3 407 aa8.81□□□□□ -1
C11orf54-202ENST00000354421 CREB3L3Q68CJ9 461 aa8.81□□□□□ -1
C11orf54-202ENST00000354421 RNF19BQ6ZMZ0 732 aa8.81□□□□□ -1
C11orf54-202ENST00000354421 CDC37L1Q7L3B6 337 aa8.81□□□□□ -1
C11orf54-202ENST00000354421 CREBRFQ8IUR6 639 aa8.81□□□□□ -1
C11orf54-202ENST00000354421 DRC7Q8IY82 874 aa8.81□□□□□ -1
C11orf54-202ENST00000354421 ZNF397Q8NF99 534 aaPredicted RBP8.81□□□□□ -1
C11orf54-202ENST00000354421 CACTINQ8WUQ7 758 aaKnown RBP8.81□□□□□ -1
C11orf54-202ENST00000354421 LEO1Q8WVC0 666 aaPredicted RBP8.81□□□□□ -1
C11orf54-202ENST00000354421 EVI5LQ96CN4 794 aa8.81□□□□□ -1
C11orf54-202ENST00000354421 ECHDC1Q9NTX5 307 aa8.81□□□□□ -1
C11orf54-202ENST00000354421 DACT1Q9NYF0 836 aa8.81□□□□□ -1
C11orf54-202ENST00000354421 RNF181Q9P0P0 153 aa8.81□□□□□ -1
C11orf54-202ENST00000354421 CA12O43570 354 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms