RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 RFX7Q2KHR2 1363 aa27.02■■□□□ 1.92
SNX3-202ENST00000349379 RPAP1Q9BWH6 1393 aaPredicted RBP27.02■■□□□ 1.92
SNX3-202ENST00000349379 IFIT2P09913 472 aaKnown RBP27.02■■□□□ 1.92
SNX3-202ENST00000349379 TNNI2P48788 182 aa27.02■■□□□ 1.92
SNX3-202ENST00000349379 NBPF12Q5TAG4 269 aaPredicted RBP27.02■■□□□ 1.92
SNX3-202ENST00000349379 RGMBQ6NW40 437 aa27.02■■□□□ 1.92
SNX3-202ENST00000349379 MOB2Q70IA6 237 aa27.02■■□□□ 1.92
SNX3-202ENST00000349379 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.02■■□□□ 1.92
SNX3-202ENST00000349379 TMOD2Q9NZR1 351 aa27.02■■□□□ 1.92
SNX3-202ENST00000349379 PCNTO95613 3336 aa27.02■■□□□ 1.92
SNX3-202ENST00000349379 LAMB1P07942 1786 aa27.02■■□□□ 1.92
SNX3-202ENST00000349379 MYH7P12883 1935 aa27.01■■□□□ 1.91
SNX3-202ENST00000349379 GPR75-ASB3A0A0A6YYF3 556 aa27■■□□□ 1.91
SNX3-202ENST00000349379 MAP3K11Q16584 847 aa27■■□□□ 1.91
SNX3-202ENST00000349379 SUPT20HL1Q3ZLR7 823 aa27■■□□□ 1.91
SNX3-202ENST00000349379 CDAN1Q8IWY9 1227 aa27■■□□□ 1.91
SNX3-202ENST00000349379 TMEM39BQ9GZU3 492 aa27■■□□□ 1.91
SNX3-202ENST00000349379 PIH1D3Q9NQM4 214 aaKnown RBP27■■□□□ 1.91
SNX3-202ENST00000349379 RAI14Q9P0K7 980 aa27■■□□□ 1.91
SNX3-202ENST00000349379 LRP2BPQ9P2M1 347 aa27■■□□□ 1.91
SNX3-202ENST00000349379 FAM155AB1AL88 458 aaPredicted RBP26.99■■□□□ 1.91
SNX3-202ENST00000349379 SMARCA5O60264 1052 aaPredicted RBP26.99■■□□□ 1.91
SNX3-202ENST00000349379 GSTO1P78417 241 aa26.99■■□□□ 1.91
SNX3-202ENST00000349379 PAXIP1Q6ZW49 1069 aaPredicted RBP26.99■■□□□ 1.91
SNX3-202ENST00000349379 LDHCP07864 332 aa26.98■■□□□ 1.91
SNX3-202ENST00000349379 HDAC1Q13547 482 aaPredicted RBP26.98■■□□□ 1.91
SNX3-202ENST00000349379 ARMC9Q7Z3E5 817 aa26.98■■□□□ 1.91
SNX3-202ENST00000349379 USP40Q9NVE5 1235 aa26.98■■□□□ 1.91
SNX3-202ENST00000349379 UBE2Q2LH0YL09 131 aa26.97■■□□□ 1.91
SNX3-202ENST00000349379 BTDP43251 543 aa26.97■■□□□ 1.91
SNX3-202ENST00000349379 NFIAQ12857 509 aa26.97■■□□□ 1.91
SNX3-202ENST00000349379 LDLRAD1Q5T700 205 aa26.97■■□□□ 1.91
SNX3-202ENST00000349379 EXOC6Q8TAG9 804 aa26.97■■□□□ 1.91
SNX3-202ENST00000349379 IDI2Q9BXS1 227 aa26.97■■□□□ 1.91
SNX3-202ENST00000349379 NDUFB9Q9Y6M9 179 aa26.97■■□□□ 1.91
SNX3-202ENST00000349379 SLC10A3P09131 477 aa26.96■■□□□ 1.91
SNX3-202ENST00000349379 MAP2K2P36507 400 aa26.96■■□□□ 1.91
SNX3-202ENST00000349379 RHBDL3P58872 404 aa26.96■■□□□ 1.91
SNX3-202ENST00000349379 TTLL12Q14166 644 aaPredicted RBP26.96■■□□□ 1.91
SNX3-202ENST00000349379 FAM151AQ8WW52 585 aa26.96■■□□□ 1.91
SNX3-202ENST00000349379 CCDC102AQ96A19 550 aa26.96■■□□□ 1.91
SNX3-202ENST00000349379 ANTXR1Q9H6X2 564 aa26.96■■□□□ 1.91
SNX3-202ENST00000349379 FAM198AQ9UFP1 575 aa26.96■■□□□ 1.91
SNX3-202ENST00000349379 FZD1Q9UP38 647 aa26.96■■□□□ 1.91
SNX3-202ENST00000349379 PPP1R12BO60237 982 aaPredicted RBP26.95■■□□□ 1.9
SNX3-202ENST00000349379 ATP5JP18859 108 aa26.95■■□□□ 1.9
SNX3-202ENST00000349379 ZNF157P51786 506 aaPredicted RBP26.95■■□□□ 1.9
SNX3-202ENST00000349379 NAA16Q6N069 864 aaPredicted RBP26.95■■□□□ 1.9
SNX3-202ENST00000349379 RASAL3Q86YV0 1011 aa26.95■■□□□ 1.9
SNX3-202ENST00000349379 ANGEL1Q9UNK9 670 aaKnown RBP26.95■■□□□ 1.9
SNX3-202ENST00000349379 AOC2O75106 756 aa26.94■■□□□ 1.9
SNX3-202ENST00000349379 USP2O75604 605 aaPredicted RBP26.94■■□□□ 1.9
SNX3-202ENST00000349379 WDHD1O75717 1129 aaPredicted RBP26.94■■□□□ 1.9
SNX3-202ENST00000349379 MAP4K4O95819 1239 aaPredicted RBP26.94■■□□□ 1.9
SNX3-202ENST00000349379 NOGQ13253 232 aa26.94■■□□□ 1.9
SNX3-202ENST00000349379 GRM1Q13255 1194 aa26.94■■□□□ 1.9
SNX3-202ENST00000349379 PRKG1Q13976 671 aa26.94■■□□□ 1.9
SNX3-202ENST00000349379 UNCXA6NJT0 531 aa26.93■■□□□ 1.9
SNX3-202ENST00000349379 ENTPD3O75355 529 aa26.92■■□□□ 1.9
SNX3-202ENST00000349379 NPM3O75607 178 aaKnown RBP26.92■■□□□ 1.9
SNX3-202ENST00000349379 HSPA1AP0DMV8 641 aaKnown RBP26.92■■□□□ 1.9
SNX3-202ENST00000349379 HSPA1BP0DMV9 641 aaKnown RBP26.92■■□□□ 1.9
SNX3-202ENST00000349379 TMED8Q6PL24 325 aaPredicted RBP26.92■■□□□ 1.9
SNX3-202ENST00000349379 ADGRA1Q86SQ6 560 aa26.92■■□□□ 1.9
SNX3-202ENST00000349379 BCL11AQ9H165 835 aa26.92■■□□□ 1.9
SNX3-202ENST00000349379 WBP1LQ9NX94 342 aa26.92■■□□□ 1.9
SNX3-202ENST00000349379 RGS3P49796 1198 aa26.91■■□□□ 1.9
SNX3-202ENST00000349379 PPP4CP60510 307 aa26.91■■□□□ 1.9
SNX3-202ENST00000349379 TCP10Q12799 353 aa26.91■■□□□ 1.9
SNX3-202ENST00000349379 TTF1Q15361 905 aaPredicted RBP26.91■■□□□ 1.9
SNX3-202ENST00000349379 ZIC5Q96T25 663 aa26.91■■□□□ 1.9
SNX3-202ENST00000349379 IDH1O75874 414 aaKnown RBP26.9■■□□□ 1.9
SNX3-202ENST00000349379 MAP2K1Q02750 393 aaPredicted RBP26.9■■□□□ 1.9
SNX3-202ENST00000349379 ZFPM1Q8IX07 1006 aa26.9■■□□□ 1.9
SNX3-202ENST00000349379 GCC1Q96CN9 775 aa26.9■■□□□ 1.9
SNX3-202ENST00000349379 HAUS7Q99871 368 aa26.9■■□□□ 1.9
SNX3-202ENST00000349379 DDX4Q9NQI0 724 aaKnown RBP26.9■■□□□ 1.9
SNX3-202ENST00000349379 COL2A1P02458 1487 aaPredicted RBP26.89■■□□□ 1.9
SNX3-202ENST00000349379 ATRNL1Q5VV63 1379 aa26.89■■□□□ 1.9
SNX3-202ENST00000349379 SIPA1L1O43166 1804 aa26.89■■□□□ 1.9
SNX3-202ENST00000349379 IREB2P48200 963 aaKnown RBP26.89■■□□□ 1.9
SNX3-202ENST00000349379 MAP3K12Q12852 859 aa26.89■■□□□ 1.9
SNX3-202ENST00000349379 HOOK2Q96ED9 719 aa26.89■■□□□ 1.9
SNX3-202ENST00000349379 BOLA2Q9H3K6 86 aa26.89■■□□□ 1.9
SNX3-202ENST00000349379 DNAJC2Q99543 621 aaKnown RBP26.88■■□□□ 1.89
SNX3-202ENST00000349379 ECHDC1Q9NTX5 307 aa26.88■■□□□ 1.89
SNX3-202ENST00000349379 MYH1P12882 1939 aa26.88■■□□□ 1.89
SNX3-202ENST00000349379 GOLIM4O00461 696 aa26.87■■□□□ 1.89
SNX3-202ENST00000349379 BAG3O95817 575 aa26.87■■□□□ 1.89
SNX3-202ENST00000349379 SH3BP5LQ7L8J4 393 aa26.87■■□□□ 1.89
SNX3-202ENST00000349379 ANKRD13AQ8IZ07 590 aa26.87■■□□□ 1.89
SNX3-202ENST00000349379 MAGEB6Q8N7X4 407 aa26.87■■□□□ 1.89
SNX3-202ENST00000349379 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.87■■□□□ 1.89
SNX3-202ENST00000349379 EDC3Q96F86 508 aaKnown RBP26.87■■□□□ 1.89
SNX3-202ENST00000349379 PAG1Q9NWQ8 432 aa26.87■■□□□ 1.89
SNX3-202ENST00000349379 AATFQ9NY61 560 aaKnown RBP eCLIP26.87■■□□□ 1.89
SNX3-202ENST00000349379 PLCG2P16885 1265 aa26.86■■□□□ 1.89
SNX3-202ENST00000349379 CYP7A1P22680 504 aa26.86■■□□□ 1.89
SNX3-202ENST00000349379 SMC5Q8IY18 1101 aa26.86■■□□□ 1.89
SNX3-202ENST00000349379 SH3RF3Q8TEJ3 882 aaPredicted RBP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms