RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 LDHCP07864 332 aa24.66■■□□□ 1.54
CLDND1-201ENST00000341181 APOBEC3HQ6NTF7 200 aaKnown RBP24.66■■□□□ 1.54
CLDND1-201ENST00000341181 AGBL3Q8NEM8 1001 aa24.66■■□□□ 1.54
CLDND1-201ENST00000341181 DSCC1Q9BVC3 393 aa24.66■■□□□ 1.54
CLDND1-201ENST00000341181 TAF6LQ9Y6J9 622 aa24.66■■□□□ 1.54
CLDND1-201ENST00000341181 GSG1L2A8MUP6 293 aa24.65■■□□□ 1.54
CLDND1-201ENST00000341181 GMPSP49915 693 aaPredicted RBP24.65■■□□□ 1.54
CLDND1-201ENST00000341181 RHBDL3P58872 404 aa24.65■■□□□ 1.54
CLDND1-201ENST00000341181 HHIPL2Q6UWX4 724 aa24.65■■□□□ 1.54
CLDND1-201ENST00000341181 SLF2Q8IX21 1173 aa24.65■■□□□ 1.54
CLDND1-201ENST00000341181 SERPINA10Q9UK55 444 aa24.64■■□□□ 1.54
CLDND1-201ENST00000341181 APPP05067 770 aa24.64■■□□□ 1.53
CLDND1-201ENST00000341181 RBM5P52756 815 aaKnown RBP eCLIP24.64■■□□□ 1.53
CLDND1-201ENST00000341181 PPP4CP60510 307 aa24.64■■□□□ 1.53
CLDND1-201ENST00000341181 ZDHHC15Q96MV8 337 aa24.64■■□□□ 1.53
CLDND1-201ENST00000341181 CDK5RAP2Q96SN8 1893 aa24.63■■□□□ 1.53
CLDND1-201ENST00000341181 FGAP02671 866 aa24.63■■□□□ 1.53
CLDND1-201ENST00000341181 USP17L8P0C7I0 530 aa24.63■■□□□ 1.53
CLDND1-201ENST00000341181 RBM25P49756 843 aaKnown RBP24.63■■□□□ 1.53
CLDND1-201ENST00000341181 NECTIN1Q15223 517 aa24.63■■□□□ 1.53
CLDND1-201ENST00000341181 BAG3O95817 575 aa24.63■■□□□ 1.53
CLDND1-201ENST00000341181 EGFRP00533 1210 aa24.63■■□□□ 1.53
CLDND1-201ENST00000341181 HSPA4P34932 840 aa24.63■■□□□ 1.53
CLDND1-201ENST00000341181 CFAP100Q494V2 611 aa24.63■■□□□ 1.53
CLDND1-201ENST00000341181 RASEFQ8IZ41 740 aa24.63■■□□□ 1.53
CLDND1-201ENST00000341181 EIF5BO60841 1220 aaKnown RBP24.62■■□□□ 1.53
CLDND1-201ENST00000341181 BAZ2AQ9UIF9 1905 aaKnown RBP24.62■■□□□ 1.53
CLDND1-201ENST00000341181 PATL2C9JE40 543 aaKnown RBP24.61■■□□□ 1.53
CLDND1-201ENST00000341181 HDLBPQ00341 1268 aaKnown RBP24.61■■□□□ 1.53
CLDND1-201ENST00000341181 OGFOD1Q8N543 542 aa24.61■■□□□ 1.53
CLDND1-201ENST00000341181 KIF2CQ99661 725 aa24.61■■□□□ 1.53
CLDND1-201ENST00000341181 NOL10Q9BSC4 688 aaKnown RBP24.61■■□□□ 1.53
CLDND1-201ENST00000341181 IFNL3Q8IZI9 196 aa24.61■■□□□ 1.53
CLDND1-201ENST00000341181 MRIQ9BWK5 157 aa24.61■■□□□ 1.53
CLDND1-201ENST00000341181 CRNKL1Q9BZJ0 848 aaKnown RBP24.61■■□□□ 1.53
CLDND1-201ENST00000341181 EPB41L2O43491 1005 aaKnown RBP24.6■■□□□ 1.53
CLDND1-201ENST00000341181 DDNO94850 711 aaPredicted RBP24.6■■□□□ 1.53
CLDND1-201ENST00000341181 GNAT2P19087 354 aa24.6■■□□□ 1.53
CLDND1-201ENST00000341181 CREB3L3Q68CJ9 461 aa24.6■■□□□ 1.53
CLDND1-201ENST00000341181 CDC42EP5Q6NZY7 148 aa24.6■■□□□ 1.53
CLDND1-201ENST00000341181 MICALL2Q8IY33 904 aa24.6■■□□□ 1.53
CLDND1-201ENST00000341181 GPC2Q8N158 579 aa24.6■■□□□ 1.53
CLDND1-201ENST00000341181 PRMT6Q96LA8 375 aaPredicted RBP24.6■■□□□ 1.53
CLDND1-201ENST00000341181 SMIM22K7EJ46 135 aa24.6■■□□□ 1.53
CLDND1-201ENST00000341181 SLC27A2O14975 620 aa24.6■■□□□ 1.53
CLDND1-201ENST00000341181 CYP21A2P08686 494 aa24.6■■□□□ 1.53
CLDND1-201ENST00000341181 RPS12P25398 132 aaKnown RBP24.6■■□□□ 1.53
CLDND1-201ENST00000341181 CACNB3P54284 484 aa24.6■■□□□ 1.53
CLDND1-201ENST00000341181 EVX2Q03828 476 aa24.6■■□□□ 1.53
CLDND1-201ENST00000341181 TEX11Q8IYF3 940 aa24.6■■□□□ 1.53
CLDND1-201ENST00000341181 TGFBRAP1Q8WUH2 860 aa24.6■■□□□ 1.53
CLDND1-201ENST00000341181 DCP1AQ9NPI6 582 aaPredicted RBP24.6■■□□□ 1.53
CLDND1-201ENST00000341181 U3KPZ7 1027 aaPredicted RBP24.6■■□□□ 1.53
CLDND1-201ENST00000341181 HAND2P61296 217 aa24.59■■□□□ 1.53
CLDND1-201ENST00000341181 SPDYE2BA6NHP3 402 aa24.59■■□□□ 1.53
CLDND1-201ENST00000341181 SPDYE6P0CI01 402 aa24.59■■□□□ 1.53
CLDND1-201ENST00000341181 HDAC9Q9UKV0 1011 aa24.59■■□□□ 1.53
CLDND1-201ENST00000341181 WDHD1O75717 1129 aaPredicted RBP24.58■■□□□ 1.53
CLDND1-201ENST00000341181 TDO2P48775 406 aa24.58■■□□□ 1.53
CLDND1-201ENST00000341181 NFIAQ12857 509 aa24.58■■□□□ 1.53
CLDND1-201ENST00000341181 COL9A3Q14050 684 aaPredicted RBP24.58■■□□□ 1.53
CLDND1-201ENST00000341181 SLC4A8Q2Y0W8 1093 aa24.58■■□□□ 1.53
CLDND1-201ENST00000341181 MAPKAPK5Q8IW41 473 aa24.58■■□□□ 1.53
CLDND1-201ENST00000341181 NAPBQ9H115 298 aa24.58■■□□□ 1.53
CLDND1-201ENST00000341181 DDX4Q9NQI0 724 aaKnown RBP24.58■■□□□ 1.53
CLDND1-201ENST00000341181 USP40Q9NVE5 1235 aa24.58■■□□□ 1.53
CLDND1-201ENST00000341181 MKRN1Q9UHC7 482 aaKnown RBP24.58■■□□□ 1.53
CLDND1-201ENST00000341181 SNX14Q9Y5W7 946 aa24.58■■□□□ 1.53
CLDND1-201ENST00000341181 ECM29Q5VYK3 1845 aa24.58■■□□□ 1.52
CLDND1-201ENST00000341181 DDX60LQ5H9U9 1706 aaKnown RBP24.58■■□□□ 1.52
CLDND1-201ENST00000341181 DPF2Q92785 391 aa24.57■■□□□ 1.52
CLDND1-201ENST00000341181 NBPF3Q9H094 633 aa24.57■■□□□ 1.52
CLDND1-201ENST00000341181 TDRD3Q9H7E2 651 aaKnown RBP24.57■■□□□ 1.52
CLDND1-201ENST00000341181 MYOZ2Q9NPC6 264 aa24.57■■□□□ 1.52
CLDND1-201ENST00000341181 CNOT7Q9UIV1 285 aaKnown RBP24.57■■□□□ 1.52
CLDND1-201ENST00000341181 FOCADQ5VW36 1801 aa24.57■■□□□ 1.52
CLDND1-201ENST00000341181 FLT1P17948 1338 aa24.57■■□□□ 1.52
CLDND1-201ENST00000341181 NAV1Q8NEY1 1877 aa24.57■■□□□ 1.52
CLDND1-201ENST00000341181 CYP2D7A0A087X1C5 515 aa24.57■■□□□ 1.52
CLDND1-201ENST00000341181 ZNF280AP59817 542 aaPredicted RBP24.57■■□□□ 1.52
CLDND1-201ENST00000341181 SAMD7Q7Z3H4 446 aa24.57■■□□□ 1.52
CLDND1-201ENST00000341181 PLCG2P16885 1265 aa24.56■■□□□ 1.52
CLDND1-201ENST00000341181 MCCP23508 829 aa24.56■■□□□ 1.52
CLDND1-201ENST00000341181 USP5P45974 858 aa24.56■■□□□ 1.52
CLDND1-201ENST00000341181 DDRGK1Q96HY6 314 aa24.56■■□□□ 1.52
CLDND1-201ENST00000341181 ZMYM6O95789 1325 aa24.56■■□□□ 1.52
CLDND1-201ENST00000341181 LAMA4Q16363 1823 aa24.56■■□□□ 1.52
CLDND1-201ENST00000341181 PICALMQ13492 652 aa24.56■■□□□ 1.52
CLDND1-201ENST00000341181 DLGAP5Q15398 846 aa24.56■■□□□ 1.52
CLDND1-201ENST00000341181 ALX1Q15699 326 aa24.56■■□□□ 1.52
CLDND1-201ENST00000341181 ADCK5Q3MIX3 580 aa24.56■■□□□ 1.52
CLDND1-201ENST00000341181 NBPF9Q3BBW0 867 aa24.55■■□□□ 1.52
CLDND1-201ENST00000341181 KCNB2Q92953 911 aa24.55■■□□□ 1.52
CLDND1-201ENST00000341181 NACAP1Q9BZK3 213 aa24.55■■□□□ 1.52
CLDND1-201ENST00000341181 ATP8A2Q9NTI2 1148 aa24.55■■□□□ 1.52
CLDND1-201ENST00000341181 GPRC5DQ9NZD1 345 aa24.55■■□□□ 1.52
CLDND1-201ENST00000341181 CLRN2A0PK11 232 aa24.54■■□□□ 1.52
CLDND1-201ENST00000341181 WNT10BO00744 389 aa24.54■■□□□ 1.52
CLDND1-201ENST00000341181 TBC1D10BQ4KMP7 808 aaPredicted RBP24.54■■□□□ 1.52
CLDND1-201ENST00000341181 RBM26Q5T8P6 1007 aaKnown RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms