RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ZNF384Q8TF68 577 aa18.78■□□□□ 0.6
PRKN-201ENST00000338468 CSRNP1Q96S65 589 aa18.78■□□□□ 0.6
PRKN-201ENST00000338468 CHMP4BQ9H444 224 aaKnown RBP18.78■□□□□ 0.6
PRKN-201ENST00000338468 NF2P35240 595 aa18.77■□□□□ 0.6
PRKN-201ENST00000338468 RRP1P56182 461 aaKnown RBP18.77■□□□□ 0.6
PRKN-201ENST00000338468 ZGPATQ8N5A5 531 aaKnown RBP18.77■□□□□ 0.6
PRKN-201ENST00000338468 TMEM39BQ9GZU3 492 aa18.77■□□□□ 0.6
PRKN-201ENST00000338468 CCDC8Q9H0W5 538 aaPredicted RBP18.77■□□□□ 0.6
PRKN-201ENST00000338468 ABCF2Q9UG63 623 aa18.77■□□□□ 0.6
PRKN-201ENST00000338468 UQCRFS1P1P0C7P4 283 aa18.76■□□□□ 0.59
PRKN-201ENST00000338468 TNFAIP1Q13829 316 aa18.76■□□□□ 0.59
PRKN-201ENST00000338468 TTLL12Q14166 644 aaPredicted RBP18.76■□□□□ 0.59
PRKN-201ENST00000338468 LDLRAD1Q5T700 205 aa18.76■□□□□ 0.59
PRKN-201ENST00000338468 TBC1D9Q6ZT07 1266 aa18.76■□□□□ 0.59
PRKN-201ENST00000338468 RHPN1Q8TCX5 695 aa18.76■□□□□ 0.59
PRKN-201ENST00000338468 GAKO14976 1311 aa18.75■□□□□ 0.59
PRKN-201ENST00000338468 HMMRO75330 724 aa18.75■□□□□ 0.59
PRKN-201ENST00000338468 MAP3K11Q16584 847 aa18.75■□□□□ 0.59
PRKN-201ENST00000338468 PRPF38BQ5VTL8 546 aaKnown RBP18.75■□□□□ 0.59
PRKN-201ENST00000338468 FKBP1CQ5VVH2 108 aa18.75■□□□□ 0.59
PRKN-201ENST00000338468 CDC42EP5Q6NZY7 148 aa18.75■□□□□ 0.59
PRKN-201ENST00000338468 ERC1Q8IUD2 1116 aa18.75■□□□□ 0.59
PRKN-201ENST00000338468 ZNF512BQ96KM6 892 aaPredicted RBP18.75■□□□□ 0.59
PRKN-201ENST00000338468 SNRKQ9NRH2 765 aa18.75■□□□□ 0.59
PRKN-201ENST00000338468 ANGEL1Q9UNK9 670 aaKnown RBP18.75■□□□□ 0.59
PRKN-201ENST00000338468 MYH2Q9UKX2 1941 aa18.74■□□□□ 0.59
PRKN-201ENST00000338468 MECOMQ03112 1051 aa18.74■□□□□ 0.59
PRKN-201ENST00000338468 SUPT20HL1Q3ZLR7 823 aa18.74■□□□□ 0.59
PRKN-201ENST00000338468 HSP90AB4PQ58FF6 505 aa18.74■□□□□ 0.59
PRKN-201ENST00000338468 TTC39AQ5SRH9 613 aa18.74■□□□□ 0.59
PRKN-201ENST00000338468 ARMC9Q7Z3E5 817 aa18.74■□□□□ 0.59
PRKN-201ENST00000338468 IL1RAPL2Q9NP60 686 aa18.74■□□□□ 0.59
PRKN-201ENST00000338468 USP2O75604 605 aaPredicted RBP18.73■□□□□ 0.59
PRKN-201ENST00000338468 CCDC158Q5M9N0 1113 aa18.73■□□□□ 0.59
PRKN-201ENST00000338468 SPTY2D1Q68D10 685 aaPredicted RBP18.73■□□□□ 0.59
PRKN-201ENST00000338468 ERICH6Q7L0X2 663 aa18.73■□□□□ 0.59
PRKN-201ENST00000338468 FAM83AQ86UY5 434 aa18.73■□□□□ 0.59
PRKN-201ENST00000338468 AACSQ86V21 672 aa18.73■□□□□ 0.59
PRKN-201ENST00000338468 DZIP1Q86YF9 867 aaKnown RBP18.73■□□□□ 0.59
PRKN-201ENST00000338468 FAM163AQ96GL9 167 aaPredicted RBP18.73■□□□□ 0.59
PRKN-201ENST00000338468 HPS5Q9UPZ3 1129 aa18.73■□□□□ 0.59
PRKN-201ENST00000338468 CYP2E1P05181 493 aaPredicted RBP18.72■□□□□ 0.59
PRKN-201ENST00000338468 TNNI2P48788 182 aa18.72■□□□□ 0.59
PRKN-201ENST00000338468 NFIAQ12857 509 aa18.72■□□□□ 0.59
PRKN-201ENST00000338468 PKN2Q16513 984 aaKnown RBP18.72■□□□□ 0.59
PRKN-201ENST00000338468 NSUN4Q96CB9 384 aaKnown RBP18.72■□□□□ 0.59
PRKN-201ENST00000338468 TMOD2Q9NZR1 351 aa18.72■□□□□ 0.59
PRKN-201ENST00000338468 MROH7-TTC4A0A0A0MT08 1334 aa18.72■□□□□ 0.59
PRKN-201ENST00000338468 RFX7Q2KHR2 1363 aa18.71■□□□□ 0.59
PRKN-201ENST00000338468 APBB1O00213 710 aa18.71■□□□□ 0.59
PRKN-201ENST00000338468 PPP1R12BO60237 982 aaPredicted RBP18.71■□□□□ 0.59
PRKN-201ENST00000338468 ZAP70P43403 619 aa18.71■□□□□ 0.59
PRKN-201ENST00000338468 KIF1BPQ96EK5 621 aa18.71■□□□□ 0.59
PRKN-201ENST00000338468 CLMNQ96JQ2 1002 aa18.71■□□□□ 0.59
PRKN-201ENST00000338468 USP40Q9NVE5 1235 aa18.71■□□□□ 0.59
PRKN-201ENST00000338468 FAM198AQ9UFP1 575 aa18.71■□□□□ 0.59
PRKN-201ENST00000338468 OTOFQ9HC10 1997 aa18.71■□□□□ 0.59
PRKN-201ENST00000338468 RPAP1Q9BWH6 1393 aaPredicted RBP18.7■□□□□ 0.58
PRKN-201ENST00000338468 RAB11FIP3O75154 756 aa18.7■□□□□ 0.58
PRKN-201ENST00000338468 PIH1D3Q9NQM4 214 aaKnown RBP18.7■□□□□ 0.58
PRKN-201ENST00000338468 MYO5AQ9Y4I1 1855 aaKnown RBP18.69■□□□□ 0.58
PRKN-201ENST00000338468 GPR75-ASB3A0A0A6YYF3 556 aa18.69■□□□□ 0.58
PRKN-201ENST00000338468 RHBDL3P58872 404 aa18.69■□□□□ 0.58
PRKN-201ENST00000338468 TCP10Q12799 353 aa18.69■□□□□ 0.58
PRKN-201ENST00000338468 ZFPM1Q8IX07 1006 aa18.69■□□□□ 0.58
PRKN-201ENST00000338468 FAM151AQ8WW52 585 aa18.69■□□□□ 0.58
PRKN-201ENST00000338468 PCDHB15Q9Y5E8 787 aa18.69■□□□□ 0.58
PRKN-201ENST00000338468 WDHD1O75717 1129 aaPredicted RBP18.68■□□□□ 0.58
PRKN-201ENST00000338468 BTDP43251 543 aa18.68■□□□□ 0.58
PRKN-201ENST00000338468 SLF2Q8IX21 1173 aa18.68■□□□□ 0.58
PRKN-201ENST00000338468 ZNF296Q8WUU4 475 aaPredicted RBP18.68■□□□□ 0.58
PRKN-201ENST00000338468 CRBNQ96SW2 442 aa18.68■□□□□ 0.58
PRKN-201ENST00000338468 IDI2Q9BXS1 227 aa18.68■□□□□ 0.58
PRKN-201ENST00000338468 RAI14Q9P0K7 980 aa18.68■□□□□ 0.58
PRKN-201ENST00000338468 LRP2BPQ9P2M1 347 aa18.68■□□□□ 0.58
PRKN-201ENST00000338468 NDUFB9Q9Y6M9 179 aa18.68■□□□□ 0.58
PRKN-201ENST00000338468 MAST2Q6P0Q8 1798 aa18.68■□□□□ 0.58
PRKN-201ENST00000338468 UNCXA6NJT0 531 aa18.67■□□□□ 0.58
PRKN-201ENST00000338468 IREB2P48200 963 aaKnown RBP18.67■□□□□ 0.58
PRKN-201ENST00000338468 MKRN3Q13064 507 aaKnown RBP18.67■□□□□ 0.58
PRKN-201ENST00000338468 SPRYD7Q5W111 196 aa18.67■□□□□ 0.58
PRKN-201ENST00000338468 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.67■□□□□ 0.58
PRKN-201ENST00000338468 CLASRPQ8N2M8 674 aaKnown RBP18.67■□□□□ 0.58
PRKN-201ENST00000338468 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.67■□□□□ 0.58
PRKN-201ENST00000338468 DDX4Q9NQI0 724 aaKnown RBP18.67■□□□□ 0.58
PRKN-201ENST00000338468 TBC1D8O95759 1140 aa18.66■□□□□ 0.58
PRKN-201ENST00000338468 GJA5P36382 358 aa18.66■□□□□ 0.58
PRKN-201ENST00000338468 RGS3P49796 1198 aa18.66■□□□□ 0.58
PRKN-201ENST00000338468 GSTO1P78417 241 aa18.66■□□□□ 0.58
PRKN-201ENST00000338468 SH3BP5LQ7L8J4 393 aa18.66■□□□□ 0.58
PRKN-201ENST00000338468 ADGRA1Q86SQ6 560 aa18.66■□□□□ 0.58
PRKN-201ENST00000338468 ANKRD13AQ8IZ07 590 aa18.66■□□□□ 0.58
PRKN-201ENST00000338468 SLC10A4Q96EP9 437 aa18.66■□□□□ 0.58
PRKN-201ENST00000338468 ANTXR1Q9H6X2 564 aa18.66■□□□□ 0.58
PRKN-201ENST00000338468 LDHCP07864 332 aa18.65■□□□□ 0.58
PRKN-201ENST00000338468 NOM1Q5C9Z4 860 aaKnown RBP18.65■□□□□ 0.58
PRKN-201ENST00000338468 WNK4Q96J92 1243 aa18.65■□□□□ 0.58
PRKN-201ENST00000338468 DCTPP1Q9H773 170 aa18.65■□□□□ 0.58
PRKN-201ENST00000338468 ATRNL1Q5VV63 1379 aa18.65■□□□□ 0.58
PRKN-201ENST00000338468 LAMB1P07942 1786 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms