RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SUGT1Q9Y2Z0 365 aa17.54■□□□□ 0.4
CDK5RAP3-201ENST00000338399 MROH7-TTC4A0A0A0MT08 1334 aa17.54■□□□□ 0.4
CDK5RAP3-201ENST00000338399 BAZ2AQ9UIF9 1905 aaKnown RBP17.54■□□□□ 0.4
CDK5RAP3-201ENST00000338399 TDO2P48775 406 aa17.54■□□□□ 0.4
CDK5RAP3-201ENST00000338399 STRIP1Q5VSL9 837 aa17.54■□□□□ 0.4
CDK5RAP3-201ENST00000338399 NOL8Q76FK4 1167 aaKnown RBP17.54■□□□□ 0.4
CDK5RAP3-201ENST00000338399 LARGE2Q8N3Y3 721 aa17.54■□□□□ 0.4
CDK5RAP3-201ENST00000338399 PDRG1Q9NUG6 133 aa17.54■□□□□ 0.4
CDK5RAP3-201ENST00000338399 ZMYM6O95789 1325 aa17.54■□□□□ 0.4
CDK5RAP3-201ENST00000338399 USP17L3A6NCW0 530 aa17.53■□□□□ 0.4
CDK5RAP3-201ENST00000338399 USP17L4A6NCW7 530 aa17.53■□□□□ 0.4
CDK5RAP3-201ENST00000338399 USP17L1Q7RTZ2 530 aa17.53■□□□□ 0.4
CDK5RAP3-201ENST00000338399 IL27Q8NEV9 243 aa17.53■□□□□ 0.4
CDK5RAP3-201ENST00000338399 NOL10Q9BSC4 688 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-201ENST00000338399 CRNKL1Q9BZJ0 848 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-201ENST00000338399 YDJCA8MPS7 323 aa17.52■□□□□ 0.4
CDK5RAP3-201ENST00000338399 BAG3O95817 575 aa17.52■□□□□ 0.4
CDK5RAP3-201ENST00000338399 RPS6KB1P23443 525 aa17.52■□□□□ 0.4
CDK5RAP3-201ENST00000338399 MCM2P49736 904 aa17.52■□□□□ 0.4
CDK5RAP3-201ENST00000338399 AK2P54819 239 aa17.52■□□□□ 0.4
CDK5RAP3-201ENST00000338399 DACT2Q5SW24 774 aa17.52■□□□□ 0.4
CDK5RAP3-201ENST00000338399 SLF2Q8IX21 1173 aa17.52■□□□□ 0.4
CDK5RAP3-201ENST00000338399 VPS33BQ9H267 617 aa17.52■□□□□ 0.4
CDK5RAP3-201ENST00000338399 TTF2Q9UNY4 1162 aaKnown RBP17.52■□□□□ 0.4
CDK5RAP3-201ENST00000338399 PPP4CP60510 307 aa17.52■□□□□ 0.39
CDK5RAP3-201ENST00000338399 FAM163AQ96GL9 167 aaPredicted RBP17.52■□□□□ 0.39
CDK5RAP3-201ENST00000338399 TCEANC2Q96MN5 208 aa17.52■□□□□ 0.39
CDK5RAP3-201ENST00000338399 NBPF3Q9H094 633 aa17.52■□□□□ 0.39
CDK5RAP3-201ENST00000338399 TAOK3Q9H2K8 898 aa17.52■□□□□ 0.39
CDK5RAP3-201ENST00000338399 COL4A5P29400 1685 aa17.52■□□□□ 0.39
CDK5RAP3-201ENST00000338399 PSME4Q14997 1843 aa17.51■□□□□ 0.39
CDK5RAP3-201ENST00000338399 IARSP41252 1262 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-201ENST00000338399 BTDP43251 543 aa17.51■□□□□ 0.39
CDK5RAP3-201ENST00000338399 SH3RF3Q8TEJ3 882 aaPredicted RBP17.51■□□□□ 0.39
CDK5RAP3-201ENST00000338399 ARFGEF1Q9Y6D6 1849 aa17.51■□□□□ 0.39
CDK5RAP3-201ENST00000338399 GAKO14976 1311 aa17.5■□□□□ 0.39
CDK5RAP3-201ENST00000338399 GPR75-ASB3A0A0A6YYF3 556 aa17.5■□□□□ 0.39
CDK5RAP3-201ENST00000338399 FKBP1AP62942 108 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-201ENST00000338399 TBC1D10CQ8IV04 446 aa17.5■□□□□ 0.39
CDK5RAP3-201ENST00000338399 LARP6Q9BRS8 491 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-201ENST00000338399 FHDC1Q9C0D6 1143 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-201ENST00000338399 CDK5RAP2Q96SN8 1893 aa17.5■□□□□ 0.39
CDK5RAP3-201ENST00000338399 NFKBIEO00221 500 aa17.5■□□□□ 0.39
CDK5RAP3-201ENST00000338399 HMGB1P09429 215 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-201ENST00000338399 SCNN1DP51172 638 aa17.5■□□□□ 0.39
CDK5RAP3-201ENST00000338399 CTDSPL2Q05D32 466 aa17.5■□□□□ 0.39
CDK5RAP3-201ENST00000338399 ATP8A2Q9NTI2 1148 aa17.5■□□□□ 0.39
CDK5RAP3-201ENST00000338399 DAGLAQ9Y4D2 1042 aa17.5■□□□□ 0.39
CDK5RAP3-201ENST00000338399 GIMAP6Q6P9H5 292 aa17.49■□□□□ 0.39
CDK5RAP3-201ENST00000338399 KIAA0825Q8IV33 1275 aa17.49■□□□□ 0.39
CDK5RAP3-201ENST00000338399 TMX3Q96JJ7 454 aa17.49■□□□□ 0.39
CDK5RAP3-201ENST00000338399 SLKQ9H2G2 1235 aaPredicted RBP17.49■□□□□ 0.39
CDK5RAP3-201ENST00000338399 DCP1AQ9NPI6 582 aaPredicted RBP17.49■□□□□ 0.39
CDK5RAP3-201ENST00000338399 ADAMTSL1Q8N6G6 1762 aa17.49■□□□□ 0.39
CDK5RAP3-201ENST00000338399 MINDY4BA8MYZ0 360 aa17.48■□□□□ 0.39
CDK5RAP3-201ENST00000338399 HSP90AA1P07900 732 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-201ENST00000338399 USP5P45974 858 aa17.48■□□□□ 0.39
CDK5RAP3-201ENST00000338399 DHX32Q7L7V1 743 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-201ENST00000338399 NIM1KQ8IY84 436 aa17.48■□□□□ 0.39
CDK5RAP3-201ENST00000338399 NCOA7Q8NI08 942 aa17.48■□□□□ 0.39
CDK5RAP3-201ENST00000338399 FOXD4L1Q9NU39 408 aa17.48■□□□□ 0.39
CDK5RAP3-201ENST00000338399 RAD17O75943 681 aa17.48■□□□□ 0.39
CDK5RAP3-201ENST00000338399 PPARAQ07869 468 aa17.48■□□□□ 0.39
CDK5RAP3-201ENST00000338399 CTR9Q6PD62 1173 aa17.48■□□□□ 0.39
CDK5RAP3-201ENST00000338399 CERS3Q8IU89 383 aa17.48■□□□□ 0.39
CDK5RAP3-201ENST00000338399 LRRC2Q9BYS8 371 aa17.48■□□□□ 0.39
CDK5RAP3-201ENST00000338399 ALDH8A1Q9H2A2 487 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-201ENST00000338399 INCENPQ9NQS7 918 aa17.48■□□□□ 0.39
CDK5RAP3-201ENST00000338399 TIAM2Q8IVF5 1701 aa17.47■□□□□ 0.39
CDK5RAP3-201ENST00000338399 CYP2D7A0A087X1C5 515 aa17.47■□□□□ 0.39
CDK5RAP3-201ENST00000338399 USP17L12C9JPN9 530 aa17.47■□□□□ 0.39
CDK5RAP3-201ENST00000338399 USP17L21D6R901 530 aa17.47■□□□□ 0.39
CDK5RAP3-201ENST00000338399 EXOSC10Q01780 885 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-201ENST00000338399 TRDNQ13061 729 aa17.47■□□□□ 0.39
CDK5RAP3-201ENST00000338399 HHIPL2Q6UWX4 724 aa17.47■□□□□ 0.39
CDK5RAP3-201ENST00000338399 Q6ZUG5 572 aa17.47■□□□□ 0.39
CDK5RAP3-201ENST00000338399 CHST3Q7LGC8 479 aa17.47■□□□□ 0.39
CDK5RAP3-201ENST00000338399 RALYLQ86SE5 291 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-201ENST00000338399 STK11IPQ8N1F8 1099 aa17.47■□□□□ 0.39
CDK5RAP3-201ENST00000338399 TGFBRAP1Q8WUH2 860 aa17.47■□□□□ 0.39
CDK5RAP3-201ENST00000338399 TEKT1Q969V4 418 aa17.47■□□□□ 0.39
CDK5RAP3-201ENST00000338399 ZNRF3Q9ULT6 936 aa17.47■□□□□ 0.39
CDK5RAP3-201ENST00000338399 LIMCH1Q9UPQ0 1083 aa17.47■□□□□ 0.39
CDK5RAP3-201ENST00000338399 TACC3Q9Y6A5 838 aa17.47■□□□□ 0.39
CDK5RAP3-201ENST00000338399 PLCG2P16885 1265 aa17.46■□□□□ 0.39
CDK5RAP3-201ENST00000338399 RHBDL3P58872 404 aa17.46■□□□□ 0.39
CDK5RAP3-201ENST00000338399 RASSF7Q02833 373 aa17.46■□□□□ 0.39
CDK5RAP3-201ENST00000338399 TOB2Q14106 344 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-201ENST00000338399 AKNAD1Q5T1N1 836 aa17.46■□□□□ 0.39
CDK5RAP3-201ENST00000338399 MB21D2Q8IYB1 491 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-201ENST00000338399 TEX11Q8IYF3 940 aa17.46■□□□□ 0.39
CDK5RAP3-201ENST00000338399 NAV1Q8NEY1 1877 aa17.46■□□□□ 0.39
CDK5RAP3-201ENST00000338399 NEDD4P46934 1319 aa17.46■□□□□ 0.39
CDK5RAP3-201ENST00000338399 LAMB1P07942 1786 aa17.46■□□□□ 0.39
CDK5RAP3-201ENST00000338399 SMIM22K7EJ46 135 aa17.46■□□□□ 0.38
CDK5RAP3-201ENST00000338399 PSMD14O00487 310 aa17.46■□□□□ 0.38
CDK5RAP3-201ENST00000338399 CRKP46108 304 aa17.46■□□□□ 0.38
CDK5RAP3-201ENST00000338399 ANKRD1Q15327 319 aa17.46■□□□□ 0.38
CDK5RAP3-201ENST00000338399 JDP2Q8WYK2 163 aa17.46■□□□□ 0.38
CDK5RAP3-201ENST00000338399 ANP32EQ9BTT0 268 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms