RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 BAG1Q99933 345 aaPredicted RBP9.06□□□□□ -0.96
VMA21-201ENST00000330374 DENND2AQ9ULE3 1009 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 RGPD8O14715 1765 aaPredicted RBP9.06□□□□□ -0.96
VMA21-201ENST00000330374 MAST3O60307 1309 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 PHLPP2Q6ZVD8 1323 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 A0A1W2PQ27 194 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 A0A1W2PQ64 194 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 A0A1W2PQD8 194 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 CCP110O43303 1012 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 TXLNBQ8N3L3 684 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 FBXO18Q8NFZ0 1043 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 VPS18Q9P253 973 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 CRYBG1Q9Y4K1 1723 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 RALYLQ86SE5 291 aaKnown RBP9.06□□□□□ -0.96
VMA21-201ENST00000330374 HSD3B7Q9H2F3 369 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 RSPH14Q9UHP6 348 aa9.06□□□□□ -0.96
VMA21-201ENST00000330374 A0A0U1RQJ8 604 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 UBE2Q2LH0YL09 131 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 CBFA2T2O43439 604 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 CNNM3Q8NE01 707 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 ATRIPQ8WXE1 791 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 SUGCTQ9HAC7 445 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 COPRSQ9NQ92 184 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 CDC27P30260 824 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 PDE4BQ07343 736 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 CCDC158Q5M9N0 1113 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 GRAMD1CQ8IYS0 662 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 MYL10Q9BUA6 226 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 METTL22Q9BUU2 404 aaPredicted RBP9.05□□□□□ -0.96
VMA21-201ENST00000330374 NWD1Q149M9 1564 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 NEDD4P46934 1319 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 LRRC24Q50LG9 513 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 AXDND1Q5T1B0 1012 aaPredicted RBP9.05□□□□□ -0.96
VMA21-201ENST00000330374 ATL3Q6DD88 541 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 KLHL10Q6JEL2 608 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 MICU3Q86XE3 530 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 OSBP2Q969R2 916 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 ZNF274Q96GC6 653 aaPredicted RBP9.05□□□□□ -0.96
VMA21-201ENST00000330374 PHF8Q9UPP1 1060 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 CHD2O14647 1828 aaKnown RBP9.05□□□□□ -0.96
VMA21-201ENST00000330374 NALCNQ8IZF0 1738 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 LRRC37A3O60309 1634 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 H3BQF6 201 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 APPP05067 770 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 RHOXF2BP0C7M4 288 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 RFX5P48382 616 aaPredicted RBP9.05□□□□□ -0.96
VMA21-201ENST00000330374 LONRF3Q496Y0 759 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 VSTM4Q8IW00 320 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 ANKRD24Q8TF21 1146 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 DDX27Q96GQ7 796 aaKnown RBP9.05□□□□□ -0.96
VMA21-201ENST00000330374 ZNF496Q96IT1 587 aaPredicted RBP9.05□□□□□ -0.96
VMA21-201ENST00000330374 RHOXF2Q9BQY4 288 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 PLEKHA4Q9H4M7 779 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 PCDHA5Q9Y5H7 936 aa9.05□□□□□ -0.96
VMA21-201ENST00000330374 SALL1Q9NSC2 1324 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 PXDNQ92626 1479 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 TULP2O00295 520 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 COBLO75128 1261 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 YEATS4O95619 227 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 KIF23Q02241 960 aaPredicted RBP9.04□□□□□ -0.96
VMA21-201ENST00000330374 ALG1Q9BT22 464 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 PDE11AQ9HCR9 933 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 KCND1Q9NSA2 647 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 ADAM21Q9UKJ8 722 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 CMA1P23946 247 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 LONRF2Q1L5Z9 754 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 ZNF790Q6PG37 636 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 SHC4Q6S5L8 630 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 PI16Q6UXB8 463 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 JCADQ9P266 1359 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 ZC3H6P61129 1189 aaKnown RBP9.04□□□□□ -0.96
VMA21-201ENST00000330374 VPS37DQ86XT2 251 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 SRRTQ9BXP5 876 aaKnown RBP9.04□□□□□ -0.96
VMA21-201ENST00000330374 PIK3C2AO00443 1686 aa9.04□□□□□ -0.96
VMA21-201ENST00000330374 RNF113AO15541 343 aaKnown RBP9.03□□□□□ -0.96
VMA21-201ENST00000330374 ARHGAP6O43182 974 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 N4BP1O75113 896 aaKnown RBP9.03□□□□□ -0.96
VMA21-201ENST00000330374 STX17P56962 302 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 IMMTQ16891 758 aaKnown RBP9.03□□□□□ -0.96
VMA21-201ENST00000330374 ZMYM1Q5SVZ6 1142 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 CADPS2Q86UW7 1296 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 BPIFA3Q9BQP9 254 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 DSCC1Q9BVC3 393 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 PUS3Q9BZE2 481 aaKnown RBP9.03□□□□□ -0.96
VMA21-201ENST00000330374 INTS13Q9NVM9 706 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 NFE2L3Q9Y4A8 694 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 SOWAHDA6NJG2 315 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 DHX16O60231 1041 aaKnown RBP9.03□□□□□ -0.96
VMA21-201ENST00000330374 AMOTQ4VCS5 1084 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 FOXP4Q8IVH2 680 aaPredicted RBP9.03□□□□□ -0.96
VMA21-201ENST00000330374 GPR161Q8N6U8 529 aaKnown RBP9.03□□□□□ -0.96
VMA21-201ENST00000330374 GOLGA1Q92805 767 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 CCDC102AQ96A19 550 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 NLRP2Q9NX02 1062 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 MYO1CO00159 1063 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 FGAP02671 866 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 NFXL1Q6ZNB6 911 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 MRPL44Q9H9J2 332 aaKnown RBP9.03□□□□□ -0.96
VMA21-201ENST00000330374 HELLSQ9NRZ9 838 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 UTYO14607 1347 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms